BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0176.p         (115 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0389 [L] COG0742 N6-adenine-specific methylase Rso Ralstonia ...    64   6e-11

>RSc0389 [L] COG0742 N6-adenine-specific methylase Rso Ralstonia
           solanacearum
          Length = 215

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 12/119 (10%)

Query: 1   VRQLEANRDKLKADKLAIVRGDALAAVQSAAQREPGGYSLVFIDPPYHQGWLEKVLPACM 60
           +R L A RDKL+A  + IV GD  A +   A++  G + LVFIDPP+ Q W  + L A +
Sbjct: 100 LRALHAVRDKLRAGMVDIVAGDVFAWL---ARQADGAFDLVFIDPPFAQDWTLRALEAAL 156

Query: 61  PLLTPSGLVYAEAEYPL----DGEQ-APEWMQDWE----VVRADKAGMVFYHLLQRKSG 110
            ++   GL+Y E+  PL     GE  APE          + R  +AG V  HLL RK+G
Sbjct: 157 RVVPEGGLIYVESPRPLVAVEPGEGVAPEAGTPLPAGVVLHRHLRAGAVHAHLLLRKNG 215