BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0075.p (364 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2174 [R] COG4603 ABC-type uncharacterized transport system, p... 479 e-135 SMc00243 [R] COG4603 ABC-type uncharacterized transport system, ... 312 9e-85 mll0503 [R] COG4603 ABC-type uncharacterized transport system, p... 305 8e-83 PA0137 [R] COG4603 ABC-type uncharacterized transport system, pe... 301 2e-81 AGc3295 [R] COG4603 ABC-type uncharacterized transport system, p... 295 1e-79 >RSc2174 [R] COG4603 ABC-type uncharacterized transport system, permease component Rso Ralstonia solanacearum Length = 369 Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust. Identities = 236/361 (65%), Positives = 293/361 (81%) Query: 3 ERMSFPLRLELRGAPSKTMTYLSPVIAIVATLFLGALLFLALGKDPLAGLKVFLVDPFNG 62 R++ P+ LELR PS+ M Y SP+IA+ TL G LLF LGKDP+AG++VFL++P Sbjct: 8 SRLALPVSLELRALPSRAMAYASPLIALALTLVFGLLLFALLGKDPVAGVRVFLIEPLAT 67 Query: 63 KRAISELLLKSVPLILCALGLAVCFRASIWNIGAEGQFTVGALCSGAMLVWLDVPGHGIS 122 KRAI E+LLK+VPL+LCALGL+VC+RA++WNIGAEGQ VG + + A ++ D P I Sbjct: 68 KRAIGEVLLKTVPLVLCALGLSVCYRANVWNIGAEGQLIVGGIFAAATIIHFDTPTPAIP 127 Query: 123 GGMGLVLMIVAGIIGGALWAGITAYLRDQFNANEILVSLMLTYVAQLLLMWAVNGPLKDP 182 GG L+L +VAG+ GG LWAG+TA LRD+F+ANEILVSLMLTY+AQLLL++ VNGPLKDP Sbjct: 128 GGAALLLAVVAGLAGGMLWAGLTALLRDRFHANEILVSLMLTYIAQLLLLYMVNGPLKDP 187 Query: 183 NGMNFPQSKVFSGEFMLPMLMSGTRLHIGFAVAIVAAILMAIFMMRSLRGFSLMVGGVAP 242 NGMNFPQS VF F+LP L++GTRLH+GF + A M +F+ RS G+ L VGG+AP Sbjct: 188 NGMNFPQSMVFDSAFVLPTLVAGTRLHVGFLFMLAMAAAMTLFVFRSFAGYRLQVGGLAP 247 Query: 243 HAARYAGFSARSALWVSLLISGAFAGLAGAFEIAGPIGQLLPSVSPGYGFAAIIVAFIGR 302 AARYAGFS+R+ALW +LL+SG AG+AGAFE+AGPIGQLLPS+SPGYGFAAI+VAF+GR Sbjct: 248 QAARYAGFSSRAALWTALLVSGGLAGIAGAFEVAGPIGQLLPSISPGYGFAAIVVAFVGR 307 Query: 303 LHPVGAILGGLIMSLLYLGGELAQSRLGLPSAITGVFQGMLLFLLLACDTLIDYRLAWKK 362 LHP+G +LG ++MSL Y+GGELAQSRLGLP+AITGVFQGMLLF LLACDTLI+YRL W+ Sbjct: 308 LHPLGTVLGAIVMSLFYIGGELAQSRLGLPAAITGVFQGMLLFFLLACDTLIEYRLRWRA 367 Query: 363 K 363 Sbjct: 368 H 368 >SMc00243 [R] COG4603 ABC-type uncharacterized transport system, permease component Sme Sinorhizobium meliloti Length = 364 Score = 312 bits (799), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 171/356 (48%), Positives = 238/356 (66%), Gaps = 6/356 (1%) Query: 9 LRLELRGAPSKTMTYLSPVIAIVATLFLGALLFLALGKDPLAGLKVFLVDPFNGKRAISE 68 + LE R S + LSP IA T+ G ++F LGK+P+ L F V+P + ++ E Sbjct: 3 IELEKRAKASTLFSILSPFIAFALTIVFGGVMFALLGKNPVTALYSFFVEPLSEVWSLHE 62 Query: 69 LLLKSVPLILCALGLAVCFRASIWNIGAEGQFTVGALCSGAMLVWLDVPGHGISGGMGLV 128 L +K+ PLIL +GL+VCFR++ WNIGAEGQF +GA+ A L V + + L Sbjct: 63 LAIKAAPLILIGVGLSVCFRSNNWNIGAEGQFIMGAIAGSA----LPVLFYDWQSPLILP 118 Query: 129 LMIVAGIIGGALWAGITAYLRDQFNANEILVSLMLTYVAQLLLMWAVNGPLKDPNGMNFP 188 LM++ G++GGAL+A I A+L+ N NEIL SLML YVAQL L W V GP ++P GMNFP Sbjct: 119 LMMLLGMLGGALFAAIPAFLKAHMNTNEILTSLMLVYVAQLFLDWLVRGPWRNPQGMNFP 178 Query: 189 QSKVFSGEFMLPMLMSGTRLHIGFAVAIVAAILMAIFMMRSLRGFSLMVGGVAPHAARYA 248 +++ F + +LP +++ R H GFA AI+AA+L+ M +L+GF + V G + A R+A Sbjct: 179 ETRTFGADAILPEMLASGRTHWGFAFAIIAAVLVWFMMRYTLKGFEITVLGQSERAGRFA 238 Query: 249 GFSARSALWVSLLISGAFAGLAGAFEIAGPIGQLLPSVSPGYGFAAIIVAFIGRLHPVGA 308 GFS+R +W S+L SGA AGLAG E++G + QL P +SPGYGF AIIVAF+GRL+P+G Sbjct: 239 GFSSRRMIWFSMLFSGALAGLAGISEVSGAMQQLRPVISPGYGFTAIIVAFLGRLNPLGI 298 Query: 309 ILGGLIMSLLYLGGELAQSRLGLPSAITGVFQGMLLFLLLACDTLIDY--RLAWKK 362 + GL+++L YLGGE AQ +G+ +T VFQG+LLF +L+CD LI Y RL W + Sbjct: 299 VAAGLVLALTYLGGEAAQLSIGVSEKVTRVFQGLLLFFVLSCDALIHYRIRLVWDR 354 >mll0503 [R] COG4603 ABC-type uncharacterized transport system, permease component Mlo Mesorhizobium loti Length = 375 Score = 305 bits (782), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 174/353 (49%), Positives = 234/353 (66%), Gaps = 7/353 (1%) Query: 9 LRLELRGAPSKTMTY--LSPVIAIVATLFLGALLFLALGKDPLAGLKVFLVDPFNGKRAI 66 +RLEL P ++ + LSP IA T+ GA+LF LG +PL +++ ++P + + Sbjct: 1 MRLELVKRPQRSALFSALSPFIAFALTIIAGAVLFALLGVNPLTAFRIYFIEPISQVWQL 60 Query: 67 SELLLKSVPLILCALGLAVCFRASIWNIGAEGQFTVGALCSGAMLVWLDVPGHGISGGMG 126 EL +K+ PLIL A+GL+VC++A+IWNIGAEGQF GA+ A+ V G + Sbjct: 61 HELAIKAAPLILIAVGLSVCYKANIWNIGAEGQFIFGAIFGSAIPVLFP----QFEGPLV 116 Query: 127 LVLMIVAGIIGGALWAGITAYLRDQFNANEILVSLMLTYVAQLLLMWAVNGPLKDPNGMN 186 L LM++ G++GGA +A I A+L+ +FN NEIL SLML YVAQL L W V GP +DP G Sbjct: 117 LPLMLLLGMVGGAAYAAIPAFLKTRFNTNEILTSLMLVYVAQLFLDWLVRGPWRDPQGHG 176 Query: 187 FPQSKVFSGEFMLPMLMSGT-RLHIGFAVAIVAAILMAIFMMRSLRGFSLMVGGVAPHAA 245 FPQ+ F +LP LM R + GF A+VAA+L+ I M R L+GF + V G +P A Sbjct: 177 FPQTIQFGDSAVLPELMPDAGRANWGFVFALVAAVLIWILMGRMLKGFEVRVLGSSPRAG 236 Query: 246 RYAGFSARSALWVSLLISGAFAGLAGAFEIAGPIGQLLPSVSPGYGFAAIIVAFIGRLHP 305 R+AGF ++ + L+SGA AGLAG E++G IGQL P +SPGYGF AIIVAF+GRL+P Sbjct: 237 RFAGFGLSRMVFFAFLLSGALAGLAGISEVSGAIGQLQPVISPGYGFTAIIVAFLGRLNP 296 Query: 306 VGAILGGLIMSLLYLGGELAQSRLGLPSAITGVFQGMLLFLLLACDTLIDYRL 358 +G I GL+++L YLGGE QS LG+ + VFQGMLLF +L CDTLI YR+ Sbjct: 297 LGIIAAGLVLALTYLGGEAVQSALGISDKVARVFQGMLLFFVLGCDTLIHYRI 349 >PA0137 [R] COG4603 ABC-type uncharacterized transport system, permease component Pae Pseudomonas aeruginosa Length = 365 Score = 301 bits (771), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 178/359 (49%), Positives = 234/359 (65%), Gaps = 8/359 (2%) Query: 9 LRLELRGAPSKTMTYLSPVIAIVATLFLGALLFLALGKDPLAGLKVFLVDPFNGKRAISE 68 L LE RG S+ M SP++A + TL GALLF LG DP L LV P + + E Sbjct: 3 LSLEPRGRQSRWMLLASPLLAGLLTLVCGALLFACLGHDPWQTLHTVLVQPLSDLYGLGE 62 Query: 69 LLLKSVPLILCALGLAVCFRASIWNIGAEGQFTVGALCSGAMLVWLDVPGHGISGGMGLV 128 LL+K++P++LCALGLA+ ++A +WNIGAEGQ VGAL A+ + L L Sbjct: 63 LLVKAMPILLCALGLALAYQARVWNIGAEGQLLVGALAGSAVAIQL----LDWQSRWALA 118 Query: 129 LMIVAGIIGGALWAGITAYLRDQFNANEILVSLMLTYVAQLLLMWAVNGPLKDPNGMNFP 188 +++AG GALWAG A+LR +FNANEIL ++ML Y+A LL++ V+GPLKDP+G NFP Sbjct: 119 WVLLAGTAAGALWAGFAAWLRTRFNANEILTTIMLNYIALNLLLYGVHGPLKDPDGFNFP 178 Query: 189 QSKVFSGEFMLPMLMSGTRLHIGFAVAIVAAILMAIFMMRSLRGFSLMVGGVAPHAARYA 248 QS +F LP L +R+H+G ++A + + RS GF + V G+ AA + Sbjct: 179 QSALFGEASRLPALFEDSRVHLGALFGLLALAAVWVLAQRSFLGFQVRVLGLDRRAAGFV 238 Query: 249 GFSARSALWVSLLISGAFAGLAGAFEIAGPIGQLLPSVSPGYGFAAIIVAFIGRLHPVGA 308 GF + +W LL SGA AGLAG E+AGPIGQL+P VSPGYG+AAI VAF+GRL+P G Sbjct: 239 GFREKRLVWFVLLFSGALAGLAGVCEVAGPIGQLVPQVSPGYGYAAITVAFLGRLNPFGI 298 Query: 309 ILGGLIMSLLYLGGELAQSRLGLPSAITGVFQGMLLFLLLACDTLIDYRL----AWKKK 363 + L+M+LLYLGGE AQ L LP A++G+FQGM+LF LLACD LI YR W+K+ Sbjct: 299 LCASLLMALLYLGGEAAQMSLNLPLALSGLFQGMMLFFLLACDVLILYRPRLHGRWRKR 357 >AGc3295 [R] COG4603 ABC-type uncharacterized transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 363 Score = 295 bits (755), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 182/350 (52%), Positives = 243/350 (69%), Gaps = 4/350 (1%) Query: 9 LRLELRGAPSKTMTYLSPVIAIVATLFLGALLFLALGKDPLAGLKVFLVDPFNGKRAISE 68 + LE R S+ T LSP++A+V TL +GA++F LGK+PL L F V+P ++ E Sbjct: 3 IELEKRAGVSRLFTLLSPLLALVLTLLVGAVMFAMLGKNPLDALYAFFVEPLLEVWSLHE 62 Query: 69 LLLKSVPLILCALGLAVCFRASIWNIGAEGQFTVGALCSGAMLVWLDVPGHGISGGMGLV 128 L +K+ PLIL +GL++C+R++ WNIGAEGQFT+GA+ +G++L L H + L Sbjct: 63 LAIKAAPLILIGVGLSICYRSNNWNIGAEGQFTIGAI-TGSILPVLYPDWHS---PLILP 118 Query: 129 LMIVAGIIGGALWAGITAYLRDQFNANEILVSLMLTYVAQLLLMWAVNGPLKDPNGMNFP 188 LM+V G IGGAL+AGI A L+ +FN NEILVSLML YVAQL L W G +DP G NFP Sbjct: 119 LMMVMGAIGGALYAGIPALLKTKFNTNEILVSLMLVYVAQLFLDWLTRGIWRDPGGYNFP 178 Query: 189 QSKVFSGEFMLPMLMSGTRLHIGFAVAIVAAILMAIFMMRSLRGFSLMVGGVAPHAARYA 248 Q+K F+ +LP +++ R H GF AIVAAI + M L+GF + V G + A R+A Sbjct: 179 QTKPFNDSAVLPEMLASGRAHWGFVFAIVAAIALWFMMRYMLKGFEVTVLGQSARAGRFA 238 Query: 249 GFSARSALWVSLLISGAFAGLAGAFEIAGPIGQLLPSVSPGYGFAAIIVAFIGRLHPVGA 308 GFS+ +W SLL+SGA AGLAG E +G IG L PS+SPGYGF AIIVAF+GRL+P+G Sbjct: 239 GFSSSRMVWFSLLLSGALAGLAGISEASGSIGHLQPSISPGYGFTAIIVAFLGRLNPLGI 298 Query: 309 ILGGLIMSLLYLGGELAQSRLGLPSAITGVFQGMLLFLLLACDTLIDYRL 358 IL GL+++L YLGGE AQ +G+ +T VFQG++LF +L+CDTLI YR+ Sbjct: 299 ILSGLVLALTYLGGEAAQLSIGVSDKVTRVFQGLMLFFVLSCDTLIFYRI 348