BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0072.p         (91 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XF0720 [R] COG3093 Plasmid maintenance system antidote protein X...   117   9e-27
ZyddM [R] COG3093 Plasmid maintenance system antidote protein Ec...    64   7e-11
ECs2081 [R] COG3093 Plasmid maintenance system antidote protein ...    64   7e-11
yddM [R] COG3093 Plasmid maintenance system antidote protein Eco...    64   1e-10

>XF0720 [R] COG3093 Plasmid maintenance system antidote protein Xfa
          Xylella fastidiosa 9a5c
          Length = 91

 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 56/89 (62%), Positives = 65/89 (73%)

Query: 1  MTRMFNPPHPGEVLREYLGEMTVTEAAMRLGVARVTLQRIVNGAAGISPDMAYRLAAAFG 60
          M RM NP HPGEVLREYLG++TVT AA +LGV+RV L RI+NGA GIS DMA RL  A G
Sbjct: 1  MKRMHNPAHPGEVLREYLGDLTVTNAAAKLGVSRVALSRILNGANGISADMALRLEDALG 60

Query: 61 TSPELWAGMQLQYDLHEAGKLARPVIERI 89
          TS E+W  MQ +YDL  A +  RP I R+
Sbjct: 61 TSAEMWVAMQFKYDLWVASQQPRPKITRL 89


>ZyddM [R] COG3093 Plasmid maintenance system antidote protein EcZ
           Escherichia coli O157:H7 EDL933
          Length = 120

 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)

Query: 1   MTRMFNPPHPGEVLREYLGEMTVT--EAAMRLGVARVTLQRIVNGAAGISPDMAYRLAAA 58
           + +M N P PG++++E L E+ V+  E A  + +A  T  R++ G A ++P+MA +L+  
Sbjct: 26  LMKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVV 85

Query: 59  FGTSPELWAGMQLQYDLHEAGK 80
            G+SP++W  +Q  + L EA K
Sbjct: 86  IGSSPQMWLNLQNAWSLAEAAK 107


>ECs2081 [R] COG3093 Plasmid maintenance system antidote protein Ecs
           Escherichia coli O157:H7
          Length = 120

 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)

Query: 1   MTRMFNPPHPGEVLREYLGEMTVT--EAAMRLGVARVTLQRIVNGAAGISPDMAYRLAAA 58
           + +M N P PG++++E L E+ V+  E A  + +A  T  R++ G A ++P+MA +L+  
Sbjct: 26  LMKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVV 85

Query: 59  FGTSPELWAGMQLQYDLHEAGK 80
            G+SP++W  +Q  + L EA K
Sbjct: 86  IGSSPQMWLNLQNAWSLAEAAK 107


>yddM [R] COG3093 Plasmid maintenance system antidote protein Eco
           Escherichia coli K12
          Length = 120

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)

Query: 1   MTRMFNPPHPGEVLREYLGEMTVT--EAAMRLGVARVTLQRIVNGAAGISPDMAYRLAAA 58
           + +M N P PG++++E L E+ V+  E A  + +A  T  R++ G A ++P+MA +L+  
Sbjct: 26  LMKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVV 85

Query: 59  FGTSPELWAGMQLQYDLHEAGK 80
            G+SP++W  +Q  + L EA K
Sbjct: 86  IGSSPQMWLNLQNAWSLAEAEK 107