BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0024.0205.p         (204 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM0628 Non COG                                                        93   3e-19
crcA Non COG                                                           93   4e-19
ZcrcA Non COG                                                          92   8e-19
ECs0661 Non COG                                                        92   8e-19
YPO1744 Non COG                                                        84   3e-16

>STM0628 Non COG
          Length = 190

 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 13/192 (6%)

Query: 19  ILRKAALVSA----ATLALAPAAHAEDNQYSLWQQTKDHASRIWNQGDD-AIYLSGVAHH 73
           I+RK  L+ A      LA+   + A+   ++      D+ +  W Q +   +Y+  +  H
Sbjct: 6   IIRKYFLIIALLLMPWLAIPSVSAADKGGFN---TFTDNVAETWRQPEHYDLYVPAITWH 62

Query: 74  GRSTYSRDKLNELNEHAWGAGYGKTLRNEQGNDESLYGFVIKDSHRHPQYMAGYAYEWVF 133
            R  Y ++K +  NE  WG G+G++  +++GN   LY    KDS    + + GY +E  +
Sbjct: 63  ARFAYDKEKTDRYNERPWGVGFGQSRWDDKGNWHGLYMMAFKDSFNKWEPIGGYGWEKTW 122

Query: 134 -PIAKTGLELGLGGTAMLMSRQDYFHSIPFPVPLPLASIGTQKAKIMFAYVPRLSANKNN 192
            P+      LGLG TA + +R D ++ IP PV LPLASIG   A     Y+P    + NN
Sbjct: 123 RPLEDDNFRLGLGFTAGVTAR-DNWNYIPIPVLLPLASIGYGPATFQMTYIP---GSYNN 178

Query: 193 GDVLLIFGRIEM 204
           G+V   + R + 
Sbjct: 179 GNVYFAWMRFQF 190


>crcA Non COG
          Length = 186

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 47  WQQT-KDHASRIWNQGDDA-IYLSGVAHHGRSTYSRDKLNELNEHAWGAGYGKTLRNEQG 104
           W  T +++ ++ W Q +   +Y+  +  H R  Y ++K +  NE  WG G+G +  +E+G
Sbjct: 30  WMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKG 89

Query: 105 NDESLYGFVIKDSHRHPQYMAGYAYEWVF-PIAKTGLELGLGGTAMLMSRQDYFHSIPFP 163
           N   LY    KDS    + +AGY +E  + P+A     LGLG TA + +R D ++ IP P
Sbjct: 90  NWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTAR-DNWNYIPLP 148

Query: 164 VPLPLASIGTQKAKIMFAYVPRLSANKNNGDVLLIFGRIEM 204
           V LPLAS+G         Y+P      NNG+V   + R + 
Sbjct: 149 VLLPLASVGYGPVTFQMTYIP---GTYNNGNVYFAWMRFQF 186


>ZcrcA Non COG
          Length = 186

 Score = 92.0 bits (227), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 7/161 (4%)

Query: 47  WQQT-KDHASRIWNQGDDA-IYLSGVAHHGRSTYSRDKLNELNEHAWGAGYGKTLRNEQG 104
           W  T +++  + W Q +   +Y+  +  H R  Y ++K +  NE  WG G+G +  +E+G
Sbjct: 30  WMTTFRENIVQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKG 89

Query: 105 NDESLYGFVIKDSHRHPQYMAGYAYEWVF-PIAKTGLELGLGGTAMLMSRQDYFHSIPFP 163
           N   LY    KDS    + +AGY +E  + P+A     LGLG TA + +R D ++ IP P
Sbjct: 90  NWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTAR-DNWNYIPLP 148

Query: 164 VPLPLASIGTQKAKIMFAYVPRLSANKNNGDVLLIFGRIEM 204
           V LPLAS+G         Y+P      NNG+V   + R + 
Sbjct: 149 VLLPLASVGYGPVTFQMTYIP---GTYNNGNVYFAWMRFQF 186


>ECs0661 Non COG
          Length = 186

 Score = 92.0 bits (227), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 7/161 (4%)

Query: 47  WQQT-KDHASRIWNQGDDA-IYLSGVAHHGRSTYSRDKLNELNEHAWGAGYGKTLRNEQG 104
           W  T +++  + W Q +   +Y+  +  H R  Y ++K +  NE  WG G+G +  +E+G
Sbjct: 30  WMTTFRENIVQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKG 89

Query: 105 NDESLYGFVIKDSHRHPQYMAGYAYEWVF-PIAKTGLELGLGGTAMLMSRQDYFHSIPFP 163
           N   LY    KDS    + +AGY +E  + P+A     LGLG TA + +R D ++ IP P
Sbjct: 90  NWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTAR-DNWNYIPLP 148

Query: 164 VPLPLASIGTQKAKIMFAYVPRLSANKNNGDVLLIFGRIEM 204
           V LPLAS+G         Y+P      NNG+V   + R + 
Sbjct: 149 VLLPLASVGYGPVTFQMTYIP---GTYNNGNVYFAWMRFQF 186


>YPO1744 Non COG
          Length = 199

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 87/178 (48%), Gaps = 12/178 (6%)

Query: 26  VSAATLALAPAAHAEDNQYSLWQQTKDHASRIWNQGDDAIYLSGVAHHGRSTYSRDKLNE 85
           VS    +L PAA       +LWQ+   + S  WN     +Y+     H R TY  +K+  
Sbjct: 32  VSKGQESLQPAAEG-----NLWQRLIRNVSLAWNSPHQELYIPVNTWHNRWTYDDEKIAS 86

Query: 86  LNEHAWGAGYGKTLRNEQGNDESLYGFVIKDSHRHPQYMAGYAYE--WVFPIAKTGLELG 143
            NE  WG GYGK   +E  N  S+Y     DSH   + + GY Y+  W+ P  + G   G
Sbjct: 87  YNERPWGVGYGKYRYDEDNNWHSVYAMAFMDSHNRVEPILGYGYQKMWI-PGEREGWRFG 145

Query: 144 LGGTAMLMSRQDYFHSIPFPVPLPLASIGTQKAKIMFAYVPRLSANKNNGDVLLIFGR 201
            G TA + +R +Y H IP P+PLPL SI   +  +   Y+P      NNG+VL  + R
Sbjct: 146 AGFTASITARYEY-HYIPLPLPLPLISIEYNRLSLQTTYIP---GTYNNGNVLFTWIR 199