BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0024.0173.p         (284 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA3081 Non COG                                                        109   6e-24
PA3922 Non COG                                                        101   2e-21
PA0383 Non COG                                                         86   8e-17
PA3421 Non COG                                                         82   1e-15

>PA3081 Non COG
          Length = 455

 Score =  109 bits (273), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 127/242 (52%), Gaps = 17/242 (7%)

Query: 4   VVMKRTILGLSL---LAMGAALA--HAASVQDLGSTLTPLGGDKA--AGQGVPEWKAENV 56
           ++ K  ++G SL   L  G ALA   A     L S+LTPLG +KA  A   +P W     
Sbjct: 1   MLNKHLLIGASLALALGSGGALAGVSAGEAAQLKSSLTPLGAEKAGNAAGSIPAWTGGIT 60

Query: 57  ELP-GWSYGKLRKDYFKYKDEKPTEVIDASNVDKYADHLTPGQVALIKQV-KGYKMDIYP 114
           + P G+  G+   D F    +KP   ID +N+++Y +HLTPGQ+AL K     ++M +YP
Sbjct: 61  QAPAGYKPGQHHPDPFA--ADKPLFTIDKANLEQYREHLTPGQLALFKTYPDSFRMPVYP 118

Query: 115 THRYCAAPDFVVENTKKNVADGKIGADGWSLAEANVPGIPFPLPKTGLEVMYNSKMRYRG 174
           + R  +AP ++ +NT  N    ++   G   A+A   G+PFP+PK+G+E ++N   RYRG
Sbjct: 119 SRRSGSAPQWLYDNTFANATSARLLDGGNGFADA-YGGVPFPIPKSGVEALWNHVARYRG 177

Query: 175 VGVDFPNTITAVSPRKGSNEWIKASQQLTLFYPSNVKGSTKLSTLGGVEFYTYVAYASXG 234
             V    +  AV  R GS   + + Q+    Y   +KG +  + L  + FY Y+++    
Sbjct: 178 TYVVRRASEVAVQ-RNGSYSLVTSQQEALFKY--YLKGGS-FADLNNLMFY-YLSFTKSP 232

Query: 235 GR 236
            R
Sbjct: 233 AR 234


>PA3922 Non COG
          Length = 455

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 104/213 (48%), Gaps = 26/213 (12%)

Query: 3   KVVMKRTILGLSLLAMGA-ALAHAASVQDLGSTLTPLGGDKA--AGQGVPEW------KA 53
           K+++   +L LSLLA    A   A     LG++LTPLG +KA  A   +P W       A
Sbjct: 5   KILLHTGVLALSLLATQVMAAVSADEAAKLGTSLTPLGAEKAGNADGSIPAWDGGLATNA 64

Query: 54  ENVELPGWSYGKLRKDYFKYKDEKPTEVIDASNVDKYADHLTPGQVALIKQV-KGYKMDI 112
            +V+  G+           Y  E+P   I A NVD+Y D LTPGQ+A+ K+    YK+ +
Sbjct: 65  GSVDSRGFLANP-------YASEQPLFTITAQNVDQYKDKLTPGQLAMFKRYPDTYKIPV 117

Query: 113 YPTHRYCAAPDFVVENTKKNVADGKIGADGWSLAEANVPGIPFPLPKTGLEVMYNSKMRY 172
           Y THR    P  V E  K+N    K+   G  L   +    PFP+P+ GLEV++N   RY
Sbjct: 118 YKTHRSATVPAAVQEAAKRNATTTKLVEGGNGLENFDTAN-PFPIPQNGLEVIWNHITRY 176

Query: 173 RGVGVDFPNTITAVSPRKGSNEWIKASQQLTLF 205
           RG  V     +T  +P+      +  S QL  F
Sbjct: 177 RGGSVR--RLVTQATPQ------VNGSYQLVYF 201


>PA0383 Non COG
          Length = 448

 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 94/192 (48%), Gaps = 9/192 (4%)

Query: 20  AALAHAASVQ--DLGSTLTPLGGDKA--AGQGVPEWKAENVELP-GWSYGKLRKDYFKYK 74
           AA A    VQ   L   LTPLG ++A  A   +P W     + P G+  G    D F   
Sbjct: 17  AAQAKVDEVQAARLDQDLTPLGAERAGNADGSIPPWTGGITQAPAGYRPGMHHLDPFA-- 74

Query: 75  DEKPTEVIDASNVDKYADHLTPGQVALIKQVKGYKMDIYPTHRYCAAPDFVVENTKKNVA 134
            ++P  V+D+ N+  Y   LTPG  AL++    Y + ++PT R  + P  + + T+ N +
Sbjct: 75  ADRPRLVLDSRNMAAYQALLTPGTQALLQANPDYHLRVFPTRRSASLPQRLYDATRANAS 134

Query: 135 DGKIGADGWSLAEANVPGIPFPLPKTGLEVMYNSKMRYRGVGVDFPNTITAVSPRKGSNE 194
             ++ ADG  +  A   G+PFPLP++G E ++N  MRYRG  +       AV    GS  
Sbjct: 135 RAELIADGNGVQGA-AAGVPFPLPQSGQEAIWNHIMRYRGEQLHLQTNQAAVLA-NGSYN 192

Query: 195 WIKASQQLTLFY 206
            +K  + L   Y
Sbjct: 193 LLKLDRYLYFVY 204


>PA3421 Non COG
          Length = 456

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 15/208 (7%)

Query: 11  LGLSLLAMGAALAHAA--SVQDLGSTLTPLGGDKA--AGQGVPEWKAENVELPGWSYGK- 65
           L LSLLA G+  A  +      LGS+LTP+G  K   A   +P W        G   GK 
Sbjct: 12  LALSLLA-GSVTAAVSPDEAAKLGSSLTPIGAQKEGNADGSIPAWTGGLAASAGKVDGKG 70

Query: 66  LRKDYFKYKDEKPTEVIDASNVDKYADHLTPGQVALIKQV-KGYKMDIYPTHRYCAAPDF 124
              D F   DEKP   I A NV++Y D L+ GQ+A+ K+  + Y++ +Y THR  A P  
Sbjct: 71  FLSDPFA--DEKPLFTITAQNVEQYKDKLSDGQLAMFKRYPETYRIPVYKTHRTVALPAE 128

Query: 125 VVENTKKNVADGKIGADGWSLAEANVPG-IPFPLPKTGLEVMYNSKMRYRGVGVDFPNTI 183
           + E  K++  + +   DG  L+         FP+PK G+EV++N   RYR  G +   TI
Sbjct: 129 IDEAVKQSALNVQPINDGNGLSNFEKSRYYAFPIPKNGVEVLWNHITRYR--GGNLKRTI 186

Query: 184 TAVSPR-KGSNEWIKASQQLTLFYPSNV 210
              +P+  GS   I+  + +   +P N+
Sbjct: 187 VQATPQTNGSFTPIRFEESVA--FPQNM 212