BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0130.p (200 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2905 [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase... 283 2e-76 NMB1945 [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase... 224 7e-59 NMA0507 [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase... 222 3e-58 SMb20135 [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylas... 218 5e-57 ubiX [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase Ec... 214 7e-56 >RSc2905 [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase Rso Ralstonia solanacearum Length = 218 Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 130/185 (70%), Positives = 159/185 (85%) Query: 12 LIVAITGATGAIYGVRLLEHLRKHGQVETHLMVSEAGVLNLHQELDMRRKDVEALADVVH 71 +IVAITGA+GAIYGVRLL+ LR VE+HL++S AG++N+ EL M R++VEALA VVH Sbjct: 28 IIVAITGASGAIYGVRLLQVLRDTAGVESHLLMSPAGLMNVQHELQMTREEVEALAHVVH 87 Query: 72 NVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVLKERRRLVLMVR 131 NVRD+GA IASGSFA+ MVVAPCSMKTLAA+AHGLSDNLI RAADV LKERRRL+LMVR Sbjct: 88 NVRDIGATIASGSFAAEAMVVAPCSMKTLAAIAHGLSDNLIARAADVTLKERRRLILMVR 147 Query: 132 ETPFNLAHLRNMTSVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLDMFGISMQLTPE 191 ETP NLAHLRNMT+VTEMGG++FPP+PGFYQRP +++++VDHT+GRVLD+ G+ L Sbjct: 148 ETPLNLAHLRNMTAVTEMGGIVFPPVPGFYQRPKTIDDLVDHTVGRVLDLLGLPQTLAAS 207 Query: 192 WKGMK 196 W G++ Sbjct: 208 WPGLQ 212 >NMB1945 [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase Nme Neisseria meningitidis MC58 Length = 190 Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 108/186 (58%), Positives = 139/186 (74%), Gaps = 1/186 (0%) Query: 10 QRLIVAITGATGAIYGVRLLEHLRKHGQVETHLMVSEAGVLNLHQELDMRRKDVEALADV 69 +RLI+ I+GA+G YGV+ LE LR VETHL+VS+ + E R +V ALAD Sbjct: 4 RRLIIGISGASGFQYGVKALELLRAQ-DVETHLVVSKGAEMARASETAYARDEVYALADF 62 Query: 70 VHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVLKERRRLVLM 129 VH + ++GACIASG+F + GM+VAPCSM+TLA+VAHG DNL+TRAADVVLKERRRLVLM Sbjct: 63 VHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDNLLTRAADVVLKERRRLVLM 122 Query: 130 VRETPFNLAHLRNMTSVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLDMFGISMQLT 189 VRETP NLAHL NM VTEMGGV+FPP+P Y++P + +++V H++ L +FGI + Sbjct: 123 VRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTADDIVAHSVAHALSLFGIDTPDS 182 Query: 190 PEWKGM 195 EW+GM Sbjct: 183 AEWQGM 188 >NMA0507 [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase NmA Neisseria meningitidis Z2491 Length = 189 Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 106/186 (56%), Positives = 138/186 (74%), Gaps = 1/186 (0%) Query: 10 QRLIVAITGATGAIYGVRLLEHLRKHGQVETHLMVSEAGVLNLHQELDMRRKDVEALADV 69 +RLI+ I+GA+G YGV+ LE LR +ETHL+VS+ + E R +V ALAD Sbjct: 3 RRLIIGISGASGFQYGVKALELLRAQ-DIETHLVVSKGAEMARASETAYARDEVYALADF 61 Query: 70 VHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVLKERRRLVLM 129 VH + ++GACIASG+F + GM+VAPCSM+TLA+V HG DNL+TRAADVVLKERRRLVLM Sbjct: 62 VHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVVHGFGDNLLTRAADVVLKERRRLVLM 121 Query: 130 VRETPFNLAHLRNMTSVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLDMFGISMQLT 189 VRETP NLAHL NM VTEMGGV+FPP+P Y++P + +++V H++ L +FGI + Sbjct: 122 VRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTADDIVAHSVAHALSLFGIDTPDS 181 Query: 190 PEWKGM 195 EW+GM Sbjct: 182 AEWQGM 187 >SMb20135 [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase Sme Sinorhizobium meliloti Length = 210 Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 101/196 (51%), Positives = 141/196 (71%), Gaps = 1/196 (0%) Query: 3 NSSSQPRQRLIVAITGATGAIYGVRLLEHLRKHGQVETHLMVSEAGVLNLHQELDMRRKD 62 + + R+R+IV I+GA+G IYG+RLLE LR +ETHL++S A + L E D + D Sbjct: 2 KADREQRKRIIVGISGASGVIYGIRLLEILRDL-DIETHLVMSRAAQITLAMETDFKVAD 60 Query: 63 VEALADVVHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVLKE 122 VEALA VH+ +D+GA +SGSF + GM+VAPCS+KTL+ +A G++ L++RAADV LKE Sbjct: 61 VEALAACVHSNKDIGASCSSGSFRTLGMIVAPCSIKTLSEIATGVTSGLLSRAADVTLKE 120 Query: 123 RRRLVLMVRETPFNLAHLRNMTSVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLDMF 182 RRRLVLM+RETP ++ H+R+M TE G +I PP+P FY RP +++EMV+HT+ RVLD+F Sbjct: 121 RRRLVLMLRETPLHIGHIRSMAQATEAGAIICPPVPAFYARPQTLDEMVNHTVARVLDLF 180 Query: 183 GISMQLTPEWKGMKGG 198 I L W G++ Sbjct: 181 DIDTGLAHRWSGLRAA 196 >ubiX [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase Eco Escherichia coli K12 Length = 189 Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 102/187 (54%), Positives = 136/187 (72%), Gaps = 2/187 (1%) Query: 10 QRLIVAITGATGAIYGVRLLEHLRKHGQVETHLMVSEAGVLNLHQELDMRRKDVEALADV 69 +RLIV I+GA+GAIYGVRLL+ LR +ETHL++S+A L E D ++V+ALADV Sbjct: 2 KRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALADV 61 Query: 70 VHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVLKERRRLVLM 129 H+ RD+ A I+SGSF + GMV+ PCS+KTL+ + H +D L+TRAADVVLKERR LVL Sbjct: 62 THDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLC 121 Query: 130 VRETPFNLAHLRNMTSVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLDMFGISM--Q 187 VRETP +L HLR MT E+G VI PP+P FY RP S++++++ T+ RVLD F I++ Sbjct: 122 VRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAITLPED 181 Query: 188 LTPEWKG 194 L W+G Sbjct: 182 LFARWQG 188