BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0106.p (255 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2246 [E] COG0411 ABC-type branched-chain amino acid transport... 366 e-101 SMb20785 [E] COG0411 ABC-type branched-chain amino acid transpor... 228 1e-59 AGl707 [E] COG0411 ABC-type branched-chain amino acid transport ... 228 1e-59 BMEII0629 [E] COG0411 ABC-type branched-chain amino acid transpo... 202 8e-52 BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 197 3e-50 >RSc2246 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 257 Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/250 (72%), Positives = 208/250 (83%) Query: 5 PADTTLRTEGLSKRWGSFVANSDISLTFTPGARHALIGPNGAGKTTFINLLTGGFAPSGG 64 P TL T GLSKRWG F AN+DISLTF PGA HALIGPNGAGKTTFINLLTG FAP+ G Sbjct: 7 PPAPTLSTHGLSKRWGGFHANADISLTFAPGAHHALIGPNGAGKTTFINLLTGAFAPTAG 66 Query: 65 KVWFGGEDITALAQHERVKRGMTRTFQINTLFAGLTVLESVILAIQERRGLQYKWYQTVA 124 +V G+DIT L+ H+RVKRG+TRTFQINTLF GLTVLESV+LAI ER G + W++TVA Sbjct: 67 QVRLDGDDITRLSAHQRVKRGITRTFQINTLFPGLTVLESVMLAIFERTGASWHWHRTVA 126 Query: 125 SQTDVVNEAMALLESLKLGQEANSITRSLAYGKQRLVEIALALATQPKVLLLDEPAAGIP 184 + T +EAMALL L+LG +A+S T +L YGKQRL+EIALALAT P++LLLDEPAAGIP Sbjct: 127 AHTAARDEAMALLGRLQLGADASSPTHALPYGKQRLLEIALALATLPRILLLDEPAAGIP 186 Query: 185 SAESRELFEVIAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADQRV 244 + ES ELFEVIA LPR++TI+FIEHDM LVFRFAERI+VLV G+VL EGTP EIAAD RV Sbjct: 187 AGESAELFEVIAGLPRDITILFIEHDMNLVFRFAERISVLVAGRVLTEGTPQEIAADPRV 246 Query: 245 KEVYLGEAEH 254 +EVYLGEA H Sbjct: 247 REVYLGEAAH 256 >SMb20785 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 254 Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/241 (46%), Positives = 159/241 (65%) Query: 15 LSKRWGSFVANSDISLTFTPGARHALIGPNGAGKTTFINLLTGGFAPSGGKVWFGGEDIT 74 L + +G +D+SL+ PG R ALIGPNGAGKTTF+NL+TG P G+V GGE +T Sbjct: 10 LKRSFGGLAVTNDVSLSMAPGDRVALIGPNGAGKTTFVNLVTGNLKPDAGEVRIGGETVT 69 Query: 75 ALAQHERVKRGMTRTFQINTLFAGLTVLESVILAIQERRGLQYKWYQTVASQTDVVNEAM 134 + RV+RG+ R+FQ+ LF +T E V LA+ +R G + + + V+ EA Sbjct: 70 NVDAIGRVRRGLVRSFQVTRLFQDMTPAEHVALAVLQRDGRAGRMFGNFLAMPGVMAEAG 129 Query: 135 ALLESLKLGQEANSITRSLAYGKQRLVEIALALATQPKVLLLDEPAAGIPSAESRELFEV 194 +LL L L A+ R +AYG+QRL+EIA+ALA +P+VLLLDEPAAG+P +++ + + Sbjct: 130 SLLGKLGLRDLAHRPVREIAYGQQRLLEIAVALALKPRVLLLDEPAAGVPQSDTGRIEQA 189 Query: 195 IAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADQRVKEVYLGEAEH 254 +A LP ++ ++ IEHDM LVFRFA+R+ VL G V+ +G+PA++ D RV+E YLG Sbjct: 190 LADLPDDLAVLMIEHDMDLVFRFAKRVIVLAAGTVIFDGSPADVTKDPRVREAYLGSYAD 249 Query: 255 A 255 A Sbjct: 250 A 250 >AGl707 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 254 Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 112/242 (46%), Positives = 163/242 (67%) Query: 14 GLSKRWGSFVANSDISLTFTPGARHALIGPNGAGKTTFINLLTGGFAPSGGKVWFGGEDI 73 L K +G V +++SL+ +PG R LIGPNGAGKTTF+NL+TG PS G V GED+ Sbjct: 9 ALQKNFGGLVVTNNVSLSLSPGDRTVLIGPNGAGKTTFVNLVTGNIKPSAGTVRIAGEDV 68 Query: 74 TALAQHERVKRGMTRTFQINTLFAGLTVLESVILAIQERRGLQYKWYQTVASQTDVVNEA 133 T+L+ +RVKRG+ R+FQ+ LF +T E V LAI +R G + + + V++EA Sbjct: 69 TSLSASQRVKRGLVRSFQVTRLFQDMTPEEHVALAILQREGKTGRIFGRYRAMPSVMSEA 128 Query: 134 MALLESLKLGQEANSITRSLAYGKQRLVEIALALATQPKVLLLDEPAAGIPSAESRELFE 193 +L +L L A + R +AYG+QRL+EIALA+A +PK+LLLDEPAAG+PS E+ + + Sbjct: 129 RDILGTLGLLALAETRVREIAYGQQRLIEIALAMALRPKILLLDEPAAGVPSTETARIEQ 188 Query: 194 VIAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADQRVKEVYLGEAE 253 + +LP ++ I+ IEHDM LVFRFA R+ VL G V+ +G+P ++ ++ V++ YLG Sbjct: 189 ALDRLPADLAILMIEHDMDLVFRFARRVVVLAAGAVIFDGSPEDVTSNAEVRQAYLGSYA 248 Query: 254 HA 255 +A Sbjct: 249 NA 250 >BMEII0629 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 249 Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 111/243 (45%), Positives = 153/243 (62%) Query: 8 TTLRTEGLSKRWGSFVANSDISLTFTPGARHALIGPNGAGKTTFINLLTGGFAPSGGKVW 67 T L K +G +D+SL+ G R ALIGPNGAGKTTF+NL+TG A + G V Sbjct: 3 TVFEVSKLRKNFGGLAVTNDVSLSMAKGDRVALIGPNGAGKTTFVNLVTGNLAATSGTVT 62 Query: 68 FGGEDITALAQHERVKRGMTRTFQINTLFAGLTVLESVILAIQERRGLQYKWYQTVASQT 127 GGE+++ L +RV+RG+ R+FQ+ LF +T E V LAI +R G + Sbjct: 63 LGGENVSKLNAMQRVRRGLVRSFQVTRLFFDMTPEEHVALAILQREGKTGRILGNYRRMP 122 Query: 128 DVVNEAMALLESLKLGQEANSITRSLAYGKQRLVEIALALATQPKVLLLDEPAAGIPSAE 187 V++EA +L L L A +AYG+QRL+EIALALA +PKVLLLDEPAAG+P ++ Sbjct: 123 QVMDEARDILHMLGLLPLAQLRVSEIAYGQQRLLEIALALALRPKVLLLDEPAAGVPQSD 182 Query: 188 SRELFEVIAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADQRVKEV 247 + + E + +LP ++ ++ IEHDM LVFRFA+R+ VL G V+ +G P + D RV+E Sbjct: 183 TGRIEEALDRLPPDLAVLMIEHDMDLVFRFAKRVVVLAAGTVIFDGLPQAVVQDARVREA 242 Query: 248 YLG 250 YLG Sbjct: 243 YLG 245 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 152/240 (63%) Query: 15 LSKRWGSFVANSDISLTFTPGARHALIGPNGAGKTTFINLLTGGFAPSGGKVWFGGEDIT 74 L+K +G ++L G RHA+IGPNGAGK+T +L++G F PS G + F GE+I Sbjct: 12 LNKSFGPAHIIRGVNLAVRDGERHAVIGPNGAGKSTLFHLISGNFTPSSGSIRFQGEEIG 71 Query: 75 ALAQHERVKRGMTRTFQINTLFAGLTVLESVILAIQERRGLQYKWYQTVASQTDVVNEAM 134 L ++G+ R+FQI +F GLTV E++ LA+ R +Q+ +++ V+S V E Sbjct: 72 GLTPAAVNRKGLARSFQITNIFPGLTVFENIRLAVMRRYKVQFTFWRPVSSMRKVTAEVE 131 Query: 135 ALLESLKLGQEANSITRSLAYGKQRLVEIALALATQPKVLLLDEPAAGIPSAESRELFEV 194 +LLE ++L A ++ L+Y +QR +EI + LA+ P++++LDEP AG+ E+ + Sbjct: 132 SLLEQVRLTARAYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMAGMSQEETDYTVGL 191 Query: 195 IAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADQRVKEVYLGEAEH 254 I ++ + T++ +EHDM +VF A+RI+VLV G+++ GTP EI + RV+E YLGE H Sbjct: 192 IREITQNRTLMIVEHDMYVVFTLADRISVLVYGEIIATGTPKEIRENARVREAYLGEEAH 251