BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0101.p (213 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2253 [I] COG2057 Acyl CoA Rso Ralstonia solanacearum 349 2e-96 AGl642 [I] COG2057 Acyl CoA Atu Agrobacterium tumefaciens strain... 251 1e-66 BMEII0645 [I] COG2057 Acyl CoA Bme Brucella melitensis 248 6e-66 DRA0067 [I] COG2057 Acyl CoA Dra Deinococcus radiodurans 224 7e-59 Rv2503c [I] COG2057 Acyl CoA Mtu Mycobacterium tuberculosis H37Rv 214 1e-55 >RSc2253 [I] COG2057 Acyl CoA Rso Ralstonia solanacearum Length = 220 Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 168/212 (79%), Positives = 188/212 (88%) Query: 1 MKRFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAP 60 ++R+TR++IAARVA+DIP+G+ VNLGIGLPT VAN LPAD+EI LHSENG+LGMGPAPAP Sbjct: 9 IQRWTRDQIAARVARDIPDGSVVNLGIGLPTLVANQLPADREILLHSENGLLGMGPAPAP 68 Query: 61 GEEDEDLINAGKQPVTLLTGGSYFDHADSFSMMRGGHLDICVLGAFQVSAKGDLANWHTG 120 G ED DLINAGKQPVT+ GG+YF HADSF+MMRGGHLD CVLGAFQVSA GDLANWHTG Sbjct: 69 GAEDPDLINAGKQPVTIKPGGAYFHHADSFAMMRGGHLDYCVLGAFQVSAAGDLANWHTG 128 Query: 121 APDAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVI 180 APDAIPAVGGAMDLAIGAKQVFVMM+HQTK G+SK+V AC+YPLTGIGCV+ IYTDLAVI Sbjct: 129 APDAIPAVGGAMDLAIGAKQVFVMMEHQTKQGDSKIVPACTYPLTGIGCVDTIYTDLAVI 188 Query: 181 DVTPQGLQVREIVEGLSFAQLQELTGAPLRPA 212 DVTP GL VRE+ +GL F LQ LT PLR A Sbjct: 189 DVTPGGLIVREMADGLDFETLQTLTAVPLRRA 220 >AGl642 [I] COG2057 Acyl CoA Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 231 Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 119/208 (57%), Positives = 151/208 (72%), Gaps = 1/208 (0%) Query: 3 RFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAPGE 62 + + +IA R AQDI +GAYVNLGIG P VA Y P ++ H+ENG+L G AP GE Sbjct: 12 KLSNAQIAWRAAQDIEDGAYVNLGIGFPEMVARYQPPGRQAIFHTENGILNFGEAPPEGE 71 Query: 63 EDEDLINAGKQPVTLLTGGSYFDHADSFSMMRGGHLDICVLGAFQVSAKGDLANWHTGAP 122 ED +LINAGK+ VTL G ++F HADSF+M+RGGHLD+ +LGA+QV+ GDLANW G+ Sbjct: 72 EDWNLINAGKKAVTLKPGAAFFHHADSFAMVRGGHLDVAILGAYQVAQNGDLANWRVGS- 130 Query: 123 DAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVIDV 182 +PAVGGAMDL GAKQVFV+ +H TK GE KLVE C++PLTG+GC+ RIYT AVIDV Sbjct: 131 KGVPAVGGAMDLVHGAKQVFVITEHVTKNGEPKLVEKCAFPLTGVGCITRIYTSHAVIDV 190 Query: 183 TPQGLQVREIVEGLSFAQLQELTGAPLR 210 +RE + ++F +LQ +TGAPL Sbjct: 191 VDGRFVLREKLPAMTFEELQAMTGAPLH 218 >BMEII0645 [I] COG2057 Acyl CoA Bme Brucella melitensis Length = 229 Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 119/208 (57%), Positives = 149/208 (71%), Gaps = 1/208 (0%) Query: 3 RFTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAPGE 62 + + +IA R AQDI +GAYVNLGIG P VA Y P +E H+ENG+L G AP PGE Sbjct: 10 KLSNAQIAWRAAQDIADGAYVNLGIGFPEMVARYQPEGREAIFHTENGILDFGEAPPPGE 69 Query: 63 EDEDLINAGKQPVTLLTGGSYFDHADSFSMMRGGHLDICVLGAFQVSAKGDLANWHTGAP 122 ED DLINAGK+ VTL G ++F HADSFSM+RGGHLD+ +LGA+QV+ GDLANW GA Sbjct: 70 EDWDLINAGKKAVTLKPGAAFFHHADSFSMVRGGHLDVAILGAYQVAQNGDLANWRVGA- 128 Query: 123 DAIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVIDV 182 +PAVGGAMDL GAKQV V+ +H TK GE KLVE C++PLTG+ C+ RIYT AV+DV Sbjct: 129 KGVPAVGGAMDLVHGAKQVVVITEHVTKKGEPKLVEQCTFPLTGVKCITRIYTSHAVVDV 188 Query: 183 TPQGLQVREIVEGLSFAQLQELTGAPLR 210 + +RE + ++ +LQ +TGA L Sbjct: 189 SEGRFVLREKLAAMTLEELQAMTGAKLH 216 >DRA0067 [I] COG2057 Acyl CoA Dra Deinococcus radiodurans Length = 209 Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 110/207 (53%), Positives = 149/207 (71%), Gaps = 1/207 (0%) Query: 4 FTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAPGEE 63 +TR+E+AAR AQ++ +G YVNLGIGLPT VAN++PA ++L SENG+LG+GP P E Sbjct: 3 WTRDEMAARAAQELQDGYYVNLGIGLPTLVANHIPAGMSVWLQSENGLLGIGPFPTEDEV 62 Query: 64 DEDLINAGKQPVTLLTGGSYFDHADSFSMMRGGHLDICVLGAFQVSAKGDLANWHTGAPD 123 D DLINAGKQ VT L G S+F ADSF+M+RGGH+++ +LGA QVS GDLANW Sbjct: 63 DPDLINAGKQTVTALPGASFFSSADSFAMIRGGHVNLAILGAMQVSETGDLANWMIPG-K 121 Query: 124 AIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVIDVT 183 + +GGAMDL G ++V V+M+H K K++ C+ PLTG G V+RI TDL V+DVT Sbjct: 122 MVKGMGGAMDLVAGVQRVVVLMEHVAKGDAHKILRECTLPLTGQGVVDRIITDLGVLDVT 181 Query: 184 PQGLQVREIVEGLSFAQLQELTGAPLR 210 PQGL++ E+ G++ +L++ TGA + Sbjct: 182 PQGLKLVELAPGVTLDELRQKTGADIH 208 >Rv2503c [I] COG2057 Acyl CoA Mtu Mycobacterium tuberculosis H37Rv Length = 218 Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 105/206 (50%), Positives = 142/206 (68%), Gaps = 1/206 (0%) Query: 4 FTREEIAARVAQDIPEGAYVNLGIGLPTKVANYLPADKEIFLHSENGVLGMGPAPAPGEE 63 ++R+E+AARVA + +G YVNLGIG+PT + N++P + LHSENG+LG+GP P + Sbjct: 6 WSRDEMAARVAAEFEDGQYVNLGIGMPTLIPNHIPDGVHVVLHSENGILGVGPYPRREDV 65 Query: 64 DEDLINAGKQPVTLLTGGSYFDHADSFSMMRGGHLDICVLGAFQVSAKGDLANWHTGAPD 123 D DLINAGK+ VT L G ++F + SF ++RGGHLD+ VLGA QVS GDLANW Sbjct: 66 DADLINAGKETVTTLPGAAFFSSSTSFGIIRGGHLDVAVLGAMQVSVTGDLANWMIPG-K 124 Query: 124 AIPAVGGAMDLAIGAKQVFVMMDHQTKTGESKLVEACSYPLTGIGCVNRIYTDLAVIDVT 183 + +GGAMDL GA++V VMM+H K G K++E C+ PLTG+GCV+RI T+LAVIDV Sbjct: 125 MVKGMGGAMDLVHGARKVIVMMEHTAKDGSPKILERCTLPLTGVGCVDRIVTELAVIDVC 184 Query: 184 PQGLQVREIVEGLSFAQLQELTGAPL 209 GL + + G+S ++ T PL Sbjct: 185 ADGLHLVQTAPGVSVDEVVAKTQPPL 210