BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0051.p (497 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0744 [S] COG3517 Uncharacterized protein conserved in bacteri... 846 0.0 PA2366 [S] COG3517 Uncharacterized protein conserved in bacteria... 558 e-159 AGl1047 [S] COG3517 Uncharacterized protein conserved in bacteri... 530 e-150 YPO2938 [S] COG3517 Uncharacterized protein conserved in bacteri... 478 e-134 STM0274 [S] COG3517 Uncharacterized protein conserved in bacteri... 475 e-133 >RSp0744 [S] COG3517 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 496 Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/476 (82%), Positives = 448/476 (94%) Query: 22 LLDDIVEQSKVAKSSSEHDRAKDLITELVSQVMEGTVVVSDNLSATLDARIAELDHLISN 81 LLD+IVEQS+VAKS +EH RAKD+I ELV+QV++GTVVVSDNLSATLDAR+AELD LIS+ Sbjct: 21 LLDEIVEQSRVAKSDAEHARAKDIIGELVNQVLQGTVVVSDNLSATLDARVAELDRLISS 80 Query: 82 QVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKILNATKKELVKDFNSALEFDQSA 141 Q+SA+MH PEFQKLEG+W GL+YLV+ T KIK+LNATK++LV+DF +A++FDQSA Sbjct: 81 QLSAVMHTPEFQKLEGTWRGLSYLVKETQTSTMLKIKVLNATKRDLVRDFKTAIDFDQSA 140 Query: 142 MFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFIEQMSRIAAASHAPFITAASPELF 201 +FKKVYEEEFGTFGGAPFG L+GD+E+TRQPED+YFIEQMS +AAA+HAPFI ++SPELF Sbjct: 141 LFKKVYEEEFGTFGGAPFGTLIGDFEVTRQPEDVYFIEQMSHVAAAAHAPFIASSSPELF 200 Query: 202 GLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVGLTLPRFLGRLPFNPKDGTTVE 261 GLES+ADLGKPRDL+KVFDTVEYAKWKSFRESEDSRYVGLT+PRFLGRLP+NPKDGTTVE Sbjct: 201 GLESFADLGKPRDLAKVFDTVEYAKWKSFRESEDSRYVGLTMPRFLGRLPYNPKDGTTVE 260 Query: 262 GFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDFGWCAAIRGVEGGGLVEDLPTHTFK 321 GFNFVEDVDGTDHSKYLWCNAA+AFG++LT AFEDFGWCAAIRGVEGGGLVEDLPTHTFK Sbjct: 261 GFNFVEDVDGTDHSKYLWCNAAWAFGARLTAAFEDFGWCAAIRGVEGGGLVEDLPTHTFK 320 Query: 322 TDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYAAFFGAQSAQKPKKYNTDAA 381 TD+GE+ALKCPTEIAITDRREKELSDLGFI LVHCKN+DYAAFF AQS Q+PKKY+TD+A Sbjct: 321 TDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNSDYAAFFAAQSVQRPKKYDTDSA 380 Query: 382 NANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASNVEDFLNRWIAQYVLLDDNATQ 441 NANAVLS+QLQYIF+VSR+AHY+K+MMRDKIGSFA+A NVE FLNRWI+QYVLLDDNATQ Sbjct: 381 NANAVLSAQLQYIFSVSRVAHYLKAMMRDKIGSFASAKNVETFLNRWISQYVLLDDNATQ 440 Query: 442 EAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSVSLRLVAELPQAGKS 497 E KAQFPLREAS+QVSEVPG+PG YR+V+FLRPHFQLDELS+SLRLVA+LP+ S Sbjct: 441 EQKAQFPLREASIQVSEVPGKPGTYRSVAFLRPHFQLDELSISLRLVADLPKPTNS 496 >PA2366 [S] COG3517 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 494 Score = 558 bits (1439), Expect = e-159, Method: Compositional matrix adjust. Identities = 272/472 (57%), Positives = 355/472 (75%), Gaps = 1/472 (0%) Query: 21 TLLDDIVEQSKVAKSSSEHDRAKDLITELVSQVMEGTVVVSDNLSATLDARIAELDHLIS 80 +LLD+I+ + ++A S+ D A+D++ E +QV++ + V + A ++ RI+++D LIS Sbjct: 19 SLLDEIIAKGRMAHDDSQQDYARDMLAEFATQVLDEGMAVDKDTVAMINDRISQIDALIS 78 Query: 81 NQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKILNATKKELVKDFNSALEFDQS 140 +Q++ I+H PE QKLE SW GL+ LV NT K+++LN K EL D A+EFDQS Sbjct: 79 DQLNQIIHHPELQKLEASWRGLHQLVSNTETSARLKLRLLNVGKNELQNDLEKAVEFDQS 138 Query: 141 AMFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFIEQMSRIAAASHAPFITAASPEL 200 A+FKK+YEEE+GTFGG PF L+GD+ R P+D+ +E++S +AAA+HAPFI AASP L Sbjct: 139 ALFKKIYEEEYGTFGGHPFSLLIGDFTFGRHPQDIGLLEKLSNVAAAAHAPFIAAASPRL 198 Query: 201 FGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVGLTLPRFLGRLPFNPKDGTTV 260 F + S+ +L PRDL+K+F+++E KW++FRESEDSRYV L LP FL RLP+ P + V Sbjct: 199 FDMNSFTELAVPRDLTKIFESLELIKWRAFRESEDSRYVSLVLPNFLLRLPYGP-ETRPV 257 Query: 261 EGFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDFGWCAAIRGVEGGGLVEDLPTHTF 320 EG N+VEDV+GTDHSKYLW NAA+ ++T+AF +GWCAAIRG EGGG VE LP HTF Sbjct: 258 EGMNYVEDVNGTDHSKYLWGNAAWVLAQRITEAFAKYGWCAAIRGAEGGGAVEGLPAHTF 317 Query: 321 KTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKNTDYAAFFGAQSAQKPKKYNTDA 380 +T G+++LKCPTE+AITDRREKEL+DLGFISL H KN+D A FFG Q+ K + YNT+ Sbjct: 318 RTSSGDLSLKCPTEVAITDRREKELNDLGFISLCHKKNSDVAVFFGGQTTNKARLYNTNE 377 Query: 381 ANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAASNVEDFLNRWIAQYVLLDDNAT 440 ANANA LS+ L Y+ A SR AHY+K +MRDK+GSF NV+ +LN WIA YVL++DNA Sbjct: 378 ANANARLSAMLPYVLAASRFAHYLKVIMRDKVGSFMTRDNVQTYLNNWIADYVLINDNAP 437 Query: 441 QEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQLDELSVSLRLVAELP 492 QE KAQ+PLREA V VSEV G+PG YRA FLRPHFQL+ELS S+RLVA LP Sbjct: 438 QEIKAQYPLREARVDVSEVAGKPGAYRATVFLRPHFQLEELSASIRLVANLP 489 >AGl1047 [S] COG3517 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 493 Score = 530 bits (1364), Expect = e-150, Method: Compositional matrix adjust. Identities = 268/496 (54%), Positives = 352/496 (70%), Gaps = 10/496 (2%) Query: 1 MSAQANTEAAASAAPAAAASTLLDDIVEQSKVAKSSSEHDRAKDLITELVSQVMEGTVVV 60 MSA++ ++ A A A LL +V ++ +E DRA++L+ L Q ++GTV Sbjct: 1 MSAESLLKSEAQAT-TAENQGLLSKVVSATR----QTEPDRAQNLLRTLTDQALKGTVKY 55 Query: 61 SDNLSATLDARIAELDHLISNQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKIL 120 NL+ TL+ IAELD IS Q++AIM APEF KLEG+W GLNYLV+N+ N KI+++ Sbjct: 56 DRNLTVTLNHAIAELDRTISEQLAAIMQAPEFAKLEGTWRGLNYLVKNSETSVNLKIRVM 115 Query: 121 NATKKELVKDFNSALEFDQSAMFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFIEQ 180 NA K+EL +D A+EFDQS +FK +YE+EFGT GG P GA++GDYE +D+ ++ Sbjct: 116 NAGKRELARDLEKAVEFDQSRLFKAIYEDEFGTPGGEPLGAIIGDYEFGNSFDDVQLLQG 175 Query: 181 MSRIAAASHAPFITAASPELFGLESYADLGKPRDLSKVFDTVEYAKWKSFRESEDSRYVG 240 +S IAAA+ APFI+AASP +FG E Y DL +PRDL K+FDTVEYAKW+SFRES+DSR+V Sbjct: 176 VSSIAAAAFAPFISAASPHMFGFEDYRDLARPRDLEKIFDTVEYAKWRSFRESDDSRFVT 235 Query: 241 LTLPRFLGRLPFNPKDGTTVEGFNFVED---VDG-TDHSKYLWCNAAYAFGSKLTKAFED 296 L LPR L R+P+ PK V+ F + E V+G H +Y W NAAY G+KLT+AF Sbjct: 236 LALPRVLARMPYGPKT-NPVDDFAYDETRGAVNGDLQHDEYCWMNAAYVMGTKLTEAFAK 294 Query: 297 FGWCAAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHC 356 GWC AIRG E GG VE+LP H F +D+G++ LKCPTE+ ITDRR+ EL LGF+ L H Sbjct: 295 SGWCTAIRGAENGGRVENLPMHVFSSDDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHY 354 Query: 357 KNTDYAAFFGAQSAQKPKKYNTDAANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFA 416 KNTDYA FFGAQ+A KPK Y+ A ANA +S++L YI A SR AHY+K M RDKIGSF Sbjct: 355 KNTDYAVFFGAQTAHKPKLYDKPEATANAAVSARLPYIMATSRFAHYLKVMGRDKIGSFM 414 Query: 417 AASNVEDFLNRWIAQYVLLDDNATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHF 476 AS+ E +LNRWIA YV +D A +E++A++PLR+A V V EVPG+PG Y AV+++RP Sbjct: 415 EASDCEVWLNRWIANYVNANDEAGEESRAKYPLRDAKVTVQEVPGKPGAYNAVAWMRPWL 474 Query: 477 QLDELSVSLRLVAELP 492 Q++EL+ SLR+VA +P Sbjct: 475 QMEELTTSLRMVARIP 490 >YPO2938 [S] COG3517 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 500 Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust. Identities = 237/496 (47%), Positives = 325/496 (65%), Gaps = 6/496 (1%) Query: 1 MSAQANTEAAASAAPAAAASTLLDDIVEQSKVAKSSSEHDRAKDLITELVSQVMEGTVVV 60 MS Q A+ A A S + ++ K AKS + + L Q + +V V Sbjct: 1 MSTQDAKTKQATVASATEYSDFNTLLTKEFK-AKSEQTIAAVEGAVKTLAEQALANSVTV 59 Query: 61 SDNLSATLDARIAELDHLISNQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKIL 120 SD+ ++ + IAE+D +S+Q++ I+H EFQ LE +W GL+YLV NT E +++ L Sbjct: 60 SDDAYKSIASIIAEIDRKLSDQINLILHHQEFQSLESAWRGLHYLVNNTETDEKLRLRFL 119 Query: 121 NATKKELVKDFN--SALEFDQSAMFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFI 178 + +K EL ++ + +DQS +FKK+YEEE+G GG P+G L+ DY D+ + Sbjct: 120 DISKDELRRNMKRYKGVAWDQSPLFKKIYEEEYGQLGGEPYGCLVADYYFDHTAPDVDLL 179 Query: 179 EQMSRIAAASHAPFITAASPELFGLESYADLGKPRDLSKVF-DTVEYAKWKSFRESEDSR 237 + ++AA++H PFIT A+P + +ES+ +L PRDL+K+F +EYA W S R+SEDSR Sbjct: 180 ASIGKVAASAHVPFITGAAPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRQSEDSR 239 Query: 238 YVGLTLPRFLGRLPFNPKDGTTVEGFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDF 297 Y+GL +PRFL RLP+ + V+ F+F E DG DHSKY+W NAAYA + ++F+++ Sbjct: 240 YIGLAMPRFLSRLPYG-INTNPVDAFHFEETTDGADHSKYVWSNAAYAMAVNINRSFKEY 298 Query: 298 GWCAAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCK 357 GWC IRGVE GG+VE LP HTF TD+G + +KCPTEIAI+DRRE EL+ GFI LVH K Sbjct: 299 GWCTLIRGVESGGVVEGLPCHTFPTDDGGIDMKCPTEIAISDRREAELAKNGFIPLVHRK 358 Query: 358 NTDYAAFFGAQSAQKPKKYNTDAANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAA 417 NTDYAAF GAQS QKP +Y A ANA LS++L Y+FA SR AHY+K ++RDKIGSF Sbjct: 359 NTDYAAFIGAQSLQKPAEYYDSDATANANLSARLPYLFACSRFAHYLKCIVRDKIGSFKE 418 Query: 418 ASNVEDFLNRWIAQYVLLDD-NATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHF 476 ++ +LN W+ YV D N++ E KA+ PL A V V EV G PG Y+A FLRPHF Sbjct: 419 RDEMQRWLNDWVMNYVDGDPANSSLETKARRPLAAAEVIVEEVEGNPGYYQAKFFLRPHF 478 Query: 477 QLDELSVSLRLVAELP 492 QL+ L+VSLR+VA+LP Sbjct: 479 QLEGLTVSLRMVAKLP 494 >STM0274 [S] COG3517 Uncharacterized protein conserved in bacteria Sty Salmonella typhimurium LT2 Length = 502 Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust. Identities = 237/495 (47%), Positives = 329/495 (66%), Gaps = 6/495 (1%) Query: 3 AQANTEAA-ASAAPAAAASTLLDDIVEQSKVAKSSSEHDRAKDLITELVSQVMEGTVVVS 61 A +N +A A A A+AS D ++ Q+ K++ + + L Q + T+ VS Sbjct: 2 ANSNMQATDAVAQDTASASGEFDALLNQAFRPKTTQAAKAVEAAVQTLAQQALANTITVS 61 Query: 62 DNLSATLDARIAELDHLISNQVSAIMHAPEFQKLEGSWTGLNYLVRNTTVGENQKIKILN 121 D+ ++ A IA++D ++ Q+ I+ P++QKLE SW G+ +LV NT E KI+ +N Sbjct: 62 DDAYKSISAIIAQIDFKLTEQIKLILQHPDWQKLESSWRGMEHLVYNTETDEKLKIRFMN 121 Query: 122 ATKKELVKDFN--SALEFDQSAMFKKVYEEEFGTFGGAPFGALLGDYEITRQPEDMYFIE 179 +K EL ++ + +DQS MFKK+YE E+G GG P+G ++ DY P D+ + Sbjct: 122 LSKDELRRNMKRYKGIAWDQSPMFKKLYEAEYGQLGGEPYGCIIADYYFDHTPPDVDLLG 181 Query: 180 QMSRIAAASHAPFITAASPELFGLESYADLGKPRDLSKVF-DTVEYAKWKSFRESEDSRY 238 ++++AA++HAPFI ASP + ++S+ +L PRDL+K+ +EYA W S R SEDSRY Sbjct: 182 SIAKVAASAHAPFIAGASPSVLQMDSWQELANPRDLTKIVTQNLEYAPWNSLRASEDSRY 241 Query: 239 VGLTLPRFLGRLPFNPKDGTTVEGFNFVEDVDGTDHSKYLWCNAAYAFGSKLTKAFEDFG 298 +GLT+PRFL RLP+ K V+ F+F ED DG+DH+KY+W NAAYA G + ++F+ +G Sbjct: 242 IGLTMPRFLARLPYGAKT-NPVDEFDFEEDADGSDHTKYVWSNAAYAMGVNINRSFKHYG 300 Query: 299 WCAAIRGVEGGGLVEDLPTHTFKTDEGEVALKCPTEIAITDRREKELSDLGFISLVHCKN 358 WC IRGVE GG VE+LP HTF TD+G V +KCPTEIAI+DRRE EL+ GFI L+H KN Sbjct: 301 WCTLIRGVESGGAVENLPCHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFIPLIHRKN 360 Query: 359 TDYAAFFGAQSAQKPKKYNTDAANANAVLSSQLQYIFAVSRIAHYMKSMMRDKIGSFAAA 418 +DYAAF GAQS QKP++Y A ANA LS++L Y+FA SR AH++K ++RDKIGSF Sbjct: 361 SDYAAFIGAQSLQKPQEYYDPDATANANLSARLPYLFACSRFAHFLKCIVRDKIGSFKER 420 Query: 419 SNVEDFLNRWIAQYVLLDD-NATQEAKAQFPLREASVQVSEVPGRPGVYRAVSFLRPHFQ 477 +++ +LN WI YV D N++QE KA+ PL A V V EV G PG Y A FLRPHFQ Sbjct: 421 EDMQRWLNEWIMNYVDADPVNSSQETKARRPLAAAEVVVEEVEGNPGYYDAKFFLRPHFQ 480 Query: 478 LDELSVSLRLVAELP 492 L+ L+ SLRLV +LP Sbjct: 481 LEGLTGSLRLVTKLP 495