BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0024.0036.p         (145 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc934 [M] COG1970 Large-conductance mechanosensitive channel At...   169   2e-42
RSc2930 [M] COG1970 Large-conductance mechanosensitive channel R...   158   4e-39
mlr5692 [M] COG1970 Large-conductance mechanosensitive channel M...   155   3e-38
mll4699 [M] COG1970 Large-conductance mechanosensitive channel M...   148   3e-36
BMEI1605 [M] COG1970 Large-conductance mechanosensitive channel ...   148   4e-36

>AGc934 [M] COG1970 Large-conductance mechanosensitive channel Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 142

 Score =  169 bits (427), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 103/142 (72%)

Query: 3   MLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPLVGKIFGGLDFANYYLPLN 62
           ML +F+ F  +GNV+DLAVGVIIG AF KIV S+V D+IMP+VG IFGG DF+NY+LPL+
Sbjct: 1   MLNEFKTFIARGNVMDLAVGVIIGAAFSKIVDSVVNDLIMPIVGAIFGGFDFSNYFLPLS 60

Query: 63  GQAYGLPLAEAKKAGAVFAYGNFLTIFINFLILAFIIFQMVRAINKARDLASKHEEAAPA 122
                  LA A++ GAVFAYGNFLT+ INFLILA+IIF MV+ +NK RD   + +     
Sbjct: 61  SNVNATSLAAAREQGAVFAYGNFLTVLINFLILAWIIFLMVKGVNKLRDSVDRKKIEEKP 120

Query: 123 APAPTPEDVLLLREIRDSLKKQ 144
             AP PEDV LL EIRD LK +
Sbjct: 121 DAAPPPEDVKLLTEIRDLLKTR 142


>RSc2930 [M] COG1970 Large-conductance mechanosensitive channel Rso
           Ralstonia solanacearum
          Length = 141

 Score =  158 bits (399), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/148 (57%), Positives = 108/148 (72%), Gaps = 11/148 (7%)

Query: 1   MSMLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPLVGKIFGGLDFANYYLP 60
           M++++DF+ FA++GNV+DLAVGVIIG AFGKIV SLV D+IMPLV +I G LDF+N ++ 
Sbjct: 1   MALMQDFKKFAMRGNVIDLAVGVIIGAAFGKIVDSLVNDLIMPLVARIVGKLDFSNLFIQ 60

Query: 61  LNGQAYGLP--LAEAKKAGA-VFAYGNFLTIFINFLILAFIIFQMVRAINKARDLASKHE 117
           L     G+P  LA+ KKAG  VFAYGNF+T+ +NFLILAFI+F MVRAI +  D      
Sbjct: 61  LADAPAGVPQTLADLKKAGVPVFAYGNFITVAVNFLILAFIVFLMVRAITRVID------ 114

Query: 118 EAAPAAPAPTPEDVLLLREIRDSLKKQG 145
                 PA TPE+ LLLR+IRDSLK + 
Sbjct: 115 --TNPPPADTPENTLLLRDIRDSLKSKN 140


>mlr5692 [M] COG1970 Large-conductance mechanosensitive channel Mlo
           Mesorhizobium loti
          Length = 157

 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/142 (61%), Positives = 104/142 (73%), Gaps = 2/142 (1%)

Query: 3   MLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPLVGKIFGGLDFANYYLPLN 62
           MLK+F+ F  KGNV+DLAVGVIIG AFGKIV+SLV+D+IMP+ G IFGGLDF NYY+ L+
Sbjct: 18  MLKEFQEFISKGNVMDLAVGVIIGAAFGKIVTSLVDDVIMPIFGAIFGGLDFNNYYIGLS 77

Query: 63  GQAYGLPLAEAKKAGAVFAYGNFLTIFINFLILAFIIFQMVRAINKARDLASKHEEAAPA 122
                  LAEAKK GAVFAYG+F+T  +NFLILAFIIF MV+A+N  R    +  E   A
Sbjct: 78  SAVNATSLAEAKKQGAVFAYGSFITAVLNFLILAFIIFLMVKAVNNLRRRLER--EKPAA 135

Query: 123 APAPTPEDVLLLREIRDSLKKQ 144
             AP P DV LL EIRD L K+
Sbjct: 136 PAAPPPADVALLTEIRDLLAKR 157


>mll4699 [M] COG1970 Large-conductance mechanosensitive channel Mlo
           Mesorhizobium loti
          Length = 144

 Score =  148 bits (374), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 105/142 (73%), Gaps = 3/142 (2%)

Query: 3   MLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPLVGKIFGGLDFANYYLPLN 62
           MLK+F+ F  KGNV+DLAVGVIIG AFGKIV SLV DIIMP++G IFGGLDF NY++ L+
Sbjct: 6   MLKEFQEFISKGNVMDLAVGVIIGAAFGKIVDSLVNDIIMPIIGAIFGGLDFNNYFVGLS 65

Query: 63  GQAYGLPLAEAKKAGAVFAYGNFLTIFINFLILAFIIFQMVRAINKARDLASKHEEAAPA 122
                  LA+A+K GAV AYG+F+T+ +NF+ILAFIIF MV+A+N  R    + E   PA
Sbjct: 66  SAVNATSLADARKQGAVLAYGSFITVALNFVILAFIIFLMVKAVNNLR---KRLEREKPA 122

Query: 123 APAPTPEDVLLLREIRDSLKKQ 144
           A AP P D+ LL +IRD L ++
Sbjct: 123 AAAPPPADIALLTQIRDLLARK 144


>BMEI1605 [M] COG1970 Large-conductance mechanosensitive channel Bme Brucella
           melitensis
          Length = 144

 Score =  148 bits (373), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 78/142 (54%), Positives = 107/142 (75%), Gaps = 7/142 (4%)

Query: 3   MLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPLVGKIFGGLDFANYYLPLN 62
           MLK+F+ FA+KGN+VDLA+GVIIGGAFG +V+S+V DIIMP++G I GG+DF+N ++ L 
Sbjct: 7   MLKEFQEFALKGNMVDLAIGVIIGGAFGGLVNSIVNDIIMPIIGLITGGIDFSNMFIQLA 66

Query: 63  GQAYGLPLAEAKKAGAVFAYGNFLTIFINFLILAFIIFQMVRAINKARDLASKHEEAAPA 122
           G      LA A++AGA  AYGNF+T+ INFLI+A+++F +V+ +N+ +    K EEA PA
Sbjct: 67  GDPK-TTLAAAREAGATIAYGNFITLLINFLIIAWVLFLVVKLMNRLK----KREEAKPA 121

Query: 123 APAPTPEDVLLLREIRDSLKKQ 144
             AP+ E  +LL EIRD L KQ
Sbjct: 122 PAAPSEE--VLLTEIRDILAKQ 141