BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0024.0023.p         (98 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2948 [E] COG0118 Glutamine amidotransferase Rso Ralstonia sol...   154   4e-38
NMA0840 [E] COG0118 Glutamine amidotransferase NmA Neisseria men...   110   6e-25
NMB0630 [E] COG0118 Glutamine amidotransferase Nme Neisseria men...   109   1e-24
MJ0506 [E] COG0118 Glutamine amidotransferase Mja Methanococcus ...   107   6e-24
PA5142 [E] COG0118 Glutamine amidotransferase Pae Pseudomonas ae...   105   2e-23

>RSc2948 [E] COG0118 Glutamine amidotransferase Rso Ralstonia solanacearum
          Length = 217

 Score =  154 bits (389), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 68/96 (70%), Positives = 77/96 (80%)

Query: 3   QDDGSLFKVPQMGWNHVHQTSAHPLWEGIADNAFFYFVHSYYAVPAESSQIVGQTPYGRD 62
           Q DGS +KVPQMGWN VHQ+  H LW G+ D ++FYFVHSYYA PA   + VG+T YG  
Sbjct: 122 QPDGSRYKVPQMGWNRVHQSRTHALWAGVPDQSYFYFVHSYYARPAHPDESVGETEYGVR 181

Query: 63  FACAVARDNIFATQFHPEKSASAGLQLYRNFVHWKP 98
           F CA+ARDNIFATQFHPEKSA AGLQ+YRNFVHWKP
Sbjct: 182 FTCAIARDNIFATQFHPEKSAQAGLQIYRNFVHWKP 217


>NMA0840 [E] COG0118 Glutamine amidotransferase NmA Neisseria meningitidis
           Z2491
          Length = 212

 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 49/91 (53%), Positives = 61/91 (67%)

Query: 6   GSLFKVPQMGWNHVHQTSAHPLWEGIADNAFFYFVHSYYAVPAESSQIVGQTPYGRDFAC 65
           G   KVP MGWN V QT  HPL++GI  +  FYFVHSYY  P     I+G++ Y   FAC
Sbjct: 122 GCRLKVPHMGWNTVRQTQNHPLFQGIPQDTRFYFVHSYYFAPENPETILGESDYPSPFAC 181

Query: 66  AVARDNIFATQFHPEKSASAGLQLYRNFVHW 96
            V +DN+FATQFH EKS  AGL + +NF++W
Sbjct: 182 IVGKDNVFATQFHTEKSHDAGLTMLKNFLNW 212


>NMB0630 [E] COG0118 Glutamine amidotransferase Nme Neisseria meningitidis
           MC58
          Length = 212

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/96 (51%), Positives = 62/96 (64%)

Query: 1   VRQDDGSLFKVPQMGWNHVHQTSAHPLWEGIADNAFFYFVHSYYAVPAESSQIVGQTPYG 60
           +R   G   KVP MGWN V QT  HPL++ I  +  FYFVHSYY  P     I+G++ Y 
Sbjct: 117 LRDPQGCRLKVPHMGWNTVRQTQNHPLFKDIPQDTRFYFVHSYYFAPENPETILGESDYP 176

Query: 61  RDFACAVARDNIFATQFHPEKSASAGLQLYRNFVHW 96
             FAC V +DN+FATQFH EKS  AGL + +NF++W
Sbjct: 177 SPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW 212


>MJ0506 [E] COG0118 Glutamine amidotransferase Mja Methanococcus jannaschii
          Length = 198

 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 1/87 (1%)

Query: 10  KVPQMGWNHVHQTSAHPLWEGIADNAFFYFVHSYYAVPAESSQIVGQTPYGRDFACAVAR 69
           K+P MGWN V      PL+EGI +N++FYFVHSY+  P E   IVG+T YGR+F   + +
Sbjct: 112 KLPHMGWNSVKIVKDCPLFEGIKNNSYFYFVHSYHVNPDEDC-IVGKTEYGREFPSVINK 170

Query: 70  DNIFATQFHPEKSASAGLQLYRNFVHW 96
           DN+FATQFHPEKS   GL++  NFV  
Sbjct: 171 DNVFATQFHPEKSGKIGLKIIENFVEL 197


>PA5142 [E] COG0118 Glutamine amidotransferase Pae Pseudomonas aeruginosa
          Length = 213

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 57/91 (62%)

Query: 6   GSLFKVPQMGWNHVHQTSAHPLWEGIADNAFFYFVHSYYAVPAESSQIVGQTPYGRDFAC 65
           G   KVP MGWN V Q   HPLW  I D A FYFVHSYY       Q+VG   YG DFA 
Sbjct: 119 GEHLKVPHMGWNQVSQAVEHPLWHEIPDQARFYFVHSYYIEAGNPRQVVGHGHYGVDFAA 178

Query: 66  AVARDNIFATQFHPEKSASAGLQLYRNFVHW 96
           A+A  + FA QFHPEKS + GLQL +NFV W
Sbjct: 179 ALAEGSRFAVQFHPEKSHTHGLQLLQNFVAW 209