BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0053.p         (91 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3015 [J] COG0185 Ribosomal protein S19 Rso Ralstonia solanace...   168   3e-42
NMB0146 [J] COG0185 Ribosomal protein S19 Nme Neisseria meningit...   161   4e-40
NMA0125 [J] COG0185 Ribosomal protein S19 NmA Neisseria meningit...   161   4e-40
PM1411 [J] COG0185 Ribosomal protein S19 Pmu Pasteurella multocida    148   3e-36
HI0781 [J] COG0185 Ribosomal protein S19 Hin Haemophilus influenzae   148   3e-36

>RSc3015 [J] COG0185 Ribosomal protein S19 Rso Ralstonia solanacearum
          Length = 91

 Score =  168 bits (425), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 80/91 (87%), Positives = 85/91 (93%)

Query: 1  MTRSLKKGPFCDAHLVKKVEAAQATKDKKPIKTWSRRSTIMPDFIGLTIAVHNGKAHVPV 60
          MTRS KKGPF DAHL+KKVEAA   KDKKPIKTWSRRSTI+PDFIGLTIAVHNG+ HVPV
Sbjct: 1  MTRSAKKGPFIDAHLLKKVEAAAGGKDKKPIKTWSRRSTILPDFIGLTIAVHNGRQHVPV 60

Query: 61 YVSENMVGHKLGEFALTRTFKGHAADKKAKK 91
          YV+ENMVGHKLGEFALTRTFKGHAADKKAK+
Sbjct: 61 YVTENMVGHKLGEFALTRTFKGHAADKKAKR 91


>NMB0146 [J] COG0185 Ribosomal protein S19 Nme Neisseria meningitidis MC58
          Length = 92

 Score =  161 bits (407), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 1  MTRSLKKGPFCDAHLVKKVEAAQATKDKKPIKTWSRRSTIMPDFIGLTIAVHNGKAHVPV 60
          M RSLKKGP+ D HL+KKV+AA+A+ DK+PIKTWSRRSTI+PDFIGLTIAVHNG+ HVPV
Sbjct: 1  MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDFIGLTIAVHNGRTHVPV 60

Query: 61 YVSENMVGHKLGEFALTRTFKGHAADKKAKK 91
          ++S+NMVGHKLGEF+LTRTFKGH ADKKAKK
Sbjct: 61 FISDNMVGHKLGEFSLTRTFKGHLADKKAKK 91


>NMA0125 [J] COG0185 Ribosomal protein S19 NmA Neisseria meningitidis
          Z2491
          Length = 92

 Score =  161 bits (407), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 1  MTRSLKKGPFCDAHLVKKVEAAQATKDKKPIKTWSRRSTIMPDFIGLTIAVHNGKAHVPV 60
          M RSLKKGP+ D HL+KKV+AA+A+ DK+PIKTWSRRSTI+PDFIGLTIAVHNG+ HVPV
Sbjct: 1  MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDFIGLTIAVHNGRTHVPV 60

Query: 61 YVSENMVGHKLGEFALTRTFKGHAADKKAKK 91
          ++S+NMVGHKLGEF+LTRTFKGH ADKKAKK
Sbjct: 61 FISDNMVGHKLGEFSLTRTFKGHLADKKAKK 91


>PM1411 [J] COG0185 Ribosomal protein S19 Pmu Pasteurella multocida
          Length = 91

 Score =  148 bits (374), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 70/91 (76%), Positives = 78/91 (85%)

Query: 1  MTRSLKKGPFCDAHLVKKVEAAQATKDKKPIKTWSRRSTIMPDFIGLTIAVHNGKAHVPV 60
          M RSLKKGPF D HL+KKVE A  + DKKPIKTWSRRS I+P  IGLTIAVHNG+ HVPV
Sbjct: 1  MPRSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPV 60

Query: 61 YVSENMVGHKLGEFALTRTFKGHAADKKAKK 91
          YVS+ M+GHKLGEFA TRT++GHAADKKAKK
Sbjct: 61 YVSDEMIGHKLGEFAPTRTYRGHAADKKAKK 91


>HI0781 [J] COG0185 Ribosomal protein S19 Hin Haemophilus influenzae
          Length = 91

 Score =  148 bits (374), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 70/91 (76%), Positives = 78/91 (85%)

Query: 1  MTRSLKKGPFCDAHLVKKVEAAQATKDKKPIKTWSRRSTIMPDFIGLTIAVHNGKAHVPV 60
          M RSLKKGPF D HL+KKVE A  + DKKPIKTWSRRS I+P  IGLTIAVHNG+ HVPV
Sbjct: 1  MPRSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSMIGLTIAVHNGRQHVPV 60

Query: 61 YVSENMVGHKLGEFALTRTFKGHAADKKAKK 91
          YVS+ M+GHKLGEFA TRT++GHAADKKAKK
Sbjct: 61 YVSDEMIGHKLGEFAPTRTYRGHAADKKAKK 91