BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0052.p         (110 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3014 [J] COG0091 Ribosomal protein L22 Rso Ralstonia solanace...   167   7e-42
NMB0147 [J] COG0091 Ribosomal protein L22 Nme Neisseria meningit...   165   2e-41
NMA0124 [J] COG0091 Ribosomal protein L22 NmA Neisseria meningit...   165   2e-41
PA4258 [J] COG0091 Ribosomal protein L22 Pae Pseudomonas aeruginosa   145   3e-35
rplV [J] COG0091 Ribosomal protein L22 Eco Escherichia coli K12       138   4e-33

>RSc3014 [J] COG0091 Ribosomal protein L22 Rso Ralstonia solanacearum
          Length = 109

 Score =  167 bits (422), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 80/109 (73%), Positives = 94/109 (86%)

Query: 2   METKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAEH 61
           ME KA  RG  +SAQK RLVAD IRG  +++ALN+LAFSPKK AVI+KKV+ESAIANAEH
Sbjct: 1   MEVKAIHRGARISAQKTRLVADQIRGLPIERALNVLAFSPKKAAVIVKKVVESAIANAEH 60

Query: 62  NDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110
           N+GADIDELKVK+IY++K   LKRFTARAKGRG+RI KQ+CHI VT+GN
Sbjct: 61  NEGADIDELKVKSIYIDKATSLKRFTARAKGRGNRIEKQTCHITVTLGN 109


>NMB0147 [J] COG0091 Ribosomal protein L22 Nme Neisseria meningitidis MC58
          Length = 109

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/109 (76%), Positives = 91/109 (83%)

Query: 2   METKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAEH 61
           M   A  +   +SAQK RLVADLIRGK V QALNILAFSPKKGA +IKKVLESAIANAEH
Sbjct: 1   MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGAELIKKVLESAIANAEH 60

Query: 62  NDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110
           N+GADIDELKV TI+V+KG  LKRF ARAKGRG+RI KQ+CHI VTVGN
Sbjct: 61  NNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCHINVTVGN 109


>NMA0124 [J] COG0091 Ribosomal protein L22 NmA Neisseria meningitidis Z2491
          Length = 109

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/109 (76%), Positives = 91/109 (83%)

Query: 2   METKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAEH 61
           M   A  +   +SAQK RLVADLIRGK V QALNILAFSPKKGA +IKKVLESAIANAEH
Sbjct: 1   MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGAELIKKVLESAIANAEH 60

Query: 62  NDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110
           N+GADIDELKV TI+V+KG  LKRF ARAKGRG+RI KQ+CHI VTVGN
Sbjct: 61  NNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCHINVTVGN 109


>PA4258 [J] COG0091 Ribosomal protein L22 Pae Pseudomonas aeruginosa
          Length = 110

 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/109 (66%), Positives = 85/109 (77%)

Query: 2   METKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAEH 61
           ME  A L G  +SAQK RLVAD IRGKKV +ALN+LAFS KK A I+KKVLESA+ANAEH
Sbjct: 1   MEVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSKKAAEIMKKVLESAVANAEH 60

Query: 62  NDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110
           N+GAD+D+LKV T++V +G  LKR   RAKGR DRI K+SCHI V V +
Sbjct: 61  NEGADVDDLKVSTVFVNEGRSLKRIMPRAKGRADRIVKRSCHITVKVAD 109


>rplV [J] COG0091 Ribosomal protein L22 Eco Escherichia coli K12
          Length = 110

 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 71/109 (65%), Positives = 84/109 (77%)

Query: 2   METKATLRGVHLSAQKGRLVADLIRGKKVDQALNILAFSPKKGAVIIKKVLESAIANAEH 61
           MET A  R    SAQK RLVADLIRGKKV QAL+IL ++ KK AV++KKVLESAIANAEH
Sbjct: 1   METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEH 60

Query: 62  NDGADIDELKVKTIYVEKGAVLKRFTARAKGRGDRISKQSCHIYVTVGN 110
           NDGADID+LKV  I+V++G  +KR   RAKGR DRI K++ HI V V +
Sbjct: 61  NDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109