BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0044.p         (101 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3006 [J] COG0199 Ribosomal protein S14 Rso Ralstonia solanace...   165   3e-41
NMB0155 [J] COG0199 Ribosomal protein S14 Nme Neisseria meningit...   137   6e-33
NMA0116 [J] COG0199 Ribosomal protein S14 NmA Neisseria meningit...   137   6e-33
rpsN [J] COG0199 Ribosomal protein S14 Eco Escherichia coli K12       136   1e-32
ZrpsN [J] COG0199 Ribosomal protein S14 EcZ Escherichia coli O15...   136   1e-32

>RSc3006 [J] COG0199 Ribosomal protein S14 Rso Ralstonia solanacearum
          Length = 101

 Score =  165 bits (417), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 80/101 (79%), Positives = 91/101 (90%)

Query: 1   MAKLALINREQKRAEMVKKYAAKRAELKAIIDDQSKSEEERYEARLKLQALPRNSAPTRQ 60
           MAKL+LI RE+KRA++V KYA KRA L+AI+ DQSKSEEERYEARLKLQ LPRN+ PTRQ
Sbjct: 1   MAKLSLIEREKKRAKLVAKYAEKRAALEAIVADQSKSEEERYEARLKLQQLPRNANPTRQ 60

Query: 61  RNRCALTGRPRGTFRKFGLGRIKVREIAMRGEIPGLTKASW 101
           RNRC++TGRPRGTFRKFGL R K+REIA +GEIPGLTKASW
Sbjct: 61  RNRCSITGRPRGTFRKFGLARNKLREIAFKGEIPGLTKASW 101


>NMB0155 [J] COG0199 Ribosomal protein S14 Nme Neisseria meningitidis MC58
          Length = 101

 Score =  137 bits (345), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 75/101 (74%), Positives = 89/101 (88%)

Query: 1   MAKLALINREQKRAEMVKKYAAKRAELKAIIDDQSKSEEERYEARLKLQALPRNSAPTRQ 60
           MAK ALINR+ KR  + KKYAAKRA +KA+I+D + +EEER+EARL+ Q++PRN+AP RQ
Sbjct: 1   MAKKALINRDLKRQALAKKYAAKRAAIKAVINDSNATEEERFEARLRFQSIPRNAAPVRQ 60

Query: 61  RNRCALTGRPRGTFRKFGLGRIKVREIAMRGEIPGLTKASW 101
           R RCALTGRPRGTFRKFGLGRIK+REIAMRGEIPG+ KASW
Sbjct: 61  RRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW 101


>NMA0116 [J] COG0199 Ribosomal protein S14 NmA Neisseria meningitidis Z2491
          Length = 101

 Score =  137 bits (345), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 75/101 (74%), Positives = 89/101 (88%)

Query: 1   MAKLALINREQKRAEMVKKYAAKRAELKAIIDDQSKSEEERYEARLKLQALPRNSAPTRQ 60
           MAK ALINR+ KR  + KKYAAKRA +KA+I+D + +EEER+EARL+ Q++PRN+AP RQ
Sbjct: 1   MAKKALINRDLKRQALAKKYAAKRAAIKAVINDSNATEEERFEARLRFQSIPRNAAPVRQ 60

Query: 61  RNRCALTGRPRGTFRKFGLGRIKVREIAMRGEIPGLTKASW 101
           R RCALTGRPRGTFRKFGLGRIK+REIAMRGEIPG+ KASW
Sbjct: 61  RRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW 101


>rpsN [J] COG0199 Ribosomal protein S14 Eco Escherichia coli K12
          Length = 101

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 78/101 (77%)

Query: 1   MAKLALINREQKRAEMVKKYAAKRAELKAIIDDQSKSEEERYEARLKLQALPRNSAPTRQ 60
           MAK ++  RE KR  +  KY AKRAELKAII D + S+E+R+ A LKLQ LPR+S+P+RQ
Sbjct: 1   MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQ 60

Query: 61  RNRCALTGRPRGTFRKFGLGRIKVREIAMRGEIPGLTKASW 101
           RNRC  TGRP G  RKFGL RIKVRE AMRGEIPGL KASW
Sbjct: 61  RNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW 101


>ZrpsN [J] COG0199 Ribosomal protein S14 EcZ Escherichia coli O157:H7
           EDL933
          Length = 101

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 78/101 (77%)

Query: 1   MAKLALINREQKRAEMVKKYAAKRAELKAIIDDQSKSEEERYEARLKLQALPRNSAPTRQ 60
           MAK ++  RE KR  +  KY AKRAELKAII D + S+E+R+ A LKLQ LPR+S+P+RQ
Sbjct: 1   MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQ 60

Query: 61  RNRCALTGRPRGTFRKFGLGRIKVREIAMRGEIPGLTKASW 101
           RNRC  TGRP G  RKFGL RIKVRE AMRGEIPGL KASW
Sbjct: 61  RNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW 101