BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0031.p         (137 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2992 [J] COG0203 Ribosomal protein L17 Rso Ralstonia solanace...   199   2e-51
NMB0169 [J] COG0203 Ribosomal protein L17 Nme Neisseria meningit...   186   8e-48
NMA0102 [J] COG0203 Ribosomal protein L17 NmA Neisseria meningit...   185   3e-47
YPO0235 [J] COG0203 Ribosomal protein L17 Ype Yersinia pestis         184   4e-47
STM3414 [J] COG0203 Ribosomal protein L17 Sty Salmonella typhimu...   183   9e-47

>RSc2992 [J] COG0203 Ribosomal protein L17 Rso Ralstonia solanacearum
          Length = 132

 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/119 (80%), Positives = 107/119 (89%)

Query: 1   MRHRHGLRKLNRTSSHRLAMLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTL 60
           MRHRHGLRKLNRTS+HRLAMLRNM+ SL +HE IKTTLPKAKELR+VVEP++TL K DT+
Sbjct: 1   MRHRHGLRKLNRTSAHRLAMLRNMSNSLFQHELIKTTLPKAKELRKVVEPLITLAKKDTV 60

Query: 61  ANKRLAFNRLRDREIVGKLFSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRP 119
           AN+RLAF RLRDR++V KLF+ELGPRYA R GGY RILK GFRQGDNAPMA VELVDRP
Sbjct: 61  ANRRLAFARLRDRDMVTKLFTELGPRYATRPGGYTRILKFGFRQGDNAPMALVELVDRP 119


>NMB0169 [J] COG0203 Ribosomal protein L17 Nme Neisseria meningitidis MC58
          Length = 122

 Score =  186 bits (473), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 90/119 (75%), Positives = 105/119 (88%)

Query: 1   MRHRHGLRKLNRTSSHRLAMLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTL 60
           MRHR+G RKLNRTSSHR AMLRNM  SLL HEAI TTLPKAKELRRVVEP++TLGK  +L
Sbjct: 1   MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHEAIVTTLPKAKELRRVVEPLITLGKKPSL 60

Query: 61  ANKRLAFNRLRDREIVGKLFSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRP 119
           AN+RLAF+R RDR++V KLF +LGPR+ ARNGGY+R+LK GFR+GDNAP+A VELVD+P
Sbjct: 61  ANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGFRKGDNAPLALVELVDKP 119


>NMA0102 [J] COG0203 Ribosomal protein L17 NmA Neisseria meningitidis Z2491
          Length = 122

 Score =  185 bits (469), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 89/119 (74%), Positives = 104/119 (87%)

Query: 1   MRHRHGLRKLNRTSSHRLAMLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTL 60
           MRHR+G RKLNRTSSHR AMLRNM  SLL HE I TTLPKAKELRRVVEP++TLGK  +L
Sbjct: 1   MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKELRRVVEPLITLGKKPSL 60

Query: 61  ANKRLAFNRLRDREIVGKLFSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRP 119
           AN+RLAF+R RDR++V KLF +LGPR+ ARNGGY+R+LK GFR+GDNAP+A VELVD+P
Sbjct: 61  ANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGFRKGDNAPLALVELVDKP 119


>YPO0235 [J] COG0203 Ribosomal protein L17 Ype Yersinia pestis
          Length = 129

 Score =  184 bits (468), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 89/127 (70%), Positives = 101/127 (79%)

Query: 1   MRHRHGLRKLNRTSSHRLAMLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTL 60
           MRHR   R+LNR SSHR AM RNM  SL+RHE IKTTLPKAKELRRVVEP++TL KTD +
Sbjct: 1   MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNV 60

Query: 61  ANKRLAFNRLRDREIVGKLFSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPX 120
           AN+RLAF R RD EIV KLF+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR  
Sbjct: 61  ANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRAA 120

Query: 121 GSAWLFC 127
             A +  
Sbjct: 121 SQAEVVA 127


>STM3414 [J] COG0203 Ribosomal protein L17 Sty Salmonella typhimurium LT2
          Length = 127

 Score =  183 bits (465), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 100/118 (84%)

Query: 1   MRHRHGLRKLNRTSSHRLAMLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTL 60
           MRHR   R+LNR SSHR AM RNM  SL+RHE IKTTLPKAKELRRVVEP++TL KTD++
Sbjct: 1   MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSV 60

Query: 61  ANKRLAFNRLRDREIVGKLFSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDR 118
           AN+RLAF R RD EIV KLF+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR
Sbjct: 61  ANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDR 118