BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0309.p (252 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3343 [E] COG0410 ABC-type branched-chain amino acid transport... 375 e-104 AGl1457 [E] COG0410 ABC-type branched-chain amino acid transport... 307 1e-83 SMc03119 [E] COG0410 ABC-type branched-chain amino acid transpor... 301 1e-81 BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transpo... 294 2e-79 RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport... 192 7e-49 >RSc3343 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 246 Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/241 (76%), Positives = 207/241 (85%), Gaps = 10/241 (4%) Query: 22 LQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIKIN 81 LQI DL +WYGESHILH V+L V++GEVVTLLGRNGAGRTTTLR+IMGLVGTRKGSI ++ Sbjct: 6 LQIKDLHAWYGESHILHGVDLTVNRGEVVTLLGRNGAGRTTTLRAIMGLVGTRKGSIVVH 65 Query: 82 -----GQETINLATHKIAHYGVGYCPEERGIFSSLSAEENLMLPPFV-----SKTDKGMS 131 G ETI L TH+IAH G+GYCPEERGIF+SLS EENL+LPP + ++ + GMS Sbjct: 66 DDAGQGVETIGLPTHRIAHCGIGYCPEERGIFASLSCEENLLLPPVLKGQVATRGNAGMS 125 Query: 132 IDEIYEMFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQAL 191 + EIYEMFPNLKERRNSQGTRLSGGEQQMLAV RILRTGA LLLLDEISEGLAPVIVQAL Sbjct: 126 VAEIYEMFPNLKERRNSQGTRLSGGEQQMLAVGRILRTGANLLLLDEISEGLAPVIVQAL 185 Query: 192 ARMITTLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNELLG 251 ARMI LK +GYT+VMVEQNFRFAAPLADRFYVMEHG+IVE F ++QL+ KM L+ELLG Sbjct: 186 ARMILMLKKRGYTVVMVEQNFRFAAPLADRFYVMEHGRIVERFEAAQLQDKMPILHELLG 245 Query: 252 V 252 V Sbjct: 246 V 246 >AGl1457 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 233 Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 140/232 (60%), Positives = 189/232 (81%), Gaps = 2/232 (0%) Query: 21 VLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIKI 80 +L++S+L+SWYGES LH V+L V +GE +T+LGRNG G+TTTLR+IMG++ RKG IK+ Sbjct: 4 MLEVSNLKSWYGESQALHGVDLTVGEGETITILGRNGVGKTTTLRTIMGIIRNRKGVIKL 63 Query: 81 NGQETINLATHKIAHYGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSIDEIYEMFP 140 G++ + + H+ A YG+G+ PEERGIF++LS EENLMLPP V+ GM++DEIYE+FP Sbjct: 64 GGKDMMPVPLHRTAKYGIGFVPEERGIFATLSVEENLMLPPVVA--SGGMTLDEIYELFP 121 Query: 141 NLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALARMITTLKA 200 NL ERR S GT+LSGGEQQMLA+ARILRTG ++LLLDE +EGLAPVIVQ + ++ LK+ Sbjct: 122 NLHERRTSPGTKLSGGEQQMLAMARILRTGVKVLLLDEPTEGLAPVIVQRIGEVLQKLKS 181 Query: 201 KGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNELLGV 252 +G T+V+VEQNFRFA+ +ADRFY+M+HGQ+V +F +L A+M LN++LGV Sbjct: 182 RGMTVVLVEQNFRFASRIADRFYLMDHGQMVSNFPVGELSARMGELNKVLGV 233 >SMc03119 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 233 Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 135/232 (58%), Positives = 187/232 (80%), Gaps = 2/232 (0%) Query: 21 VLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIKI 80 +L+++ L +WYGESH+LH V++ V +GE+VTLLGRNG G+TTTLR+IMG+V R+G I Sbjct: 4 LLKVAGLNAWYGESHVLHGVDMTVGEGEMVTLLGRNGVGKTTTLRAIMGIVRERRGEISF 63 Query: 81 NGQETINLATHKIAHYGVGYCPEERGIFSSLSAEENLMLPPFVSKTDKGMSIDEIYEMFP 140 G++ + + H++AH G+G+ PEERGIFS+L+ ENL+LPP V+K GM+IDEI+E+FP Sbjct: 64 AGEDLMRVPLHRVAHRGLGFVPEERGIFSTLTVYENLLLPPAVAKG--GMTIDEIFELFP 121 Query: 141 NLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALARMITTLKA 200 NL ERRNS GT+LSGGEQQMLA+ARILRTG R++LLDE +EGLAPVIVQ + ++ LK Sbjct: 122 NLHERRNSAGTKLSGGEQQMLAIARILRTGVRMMLLDEPTEGLAPVIVQRIGEVLKKLKE 181 Query: 201 KGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNELLGV 252 +G T+++VEQNFRFA+ +ADRFY+M+HG++ F S+L +M L+++LGV Sbjct: 182 RGMTVLLVEQNFRFASKVADRFYLMDHGRVAGEFPVSELSGRMDMLHDVLGV 233 >BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 274 Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 133/235 (56%), Positives = 185/235 (78%), Gaps = 3/235 (1%) Query: 21 VLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTRKGSIKI 80 +L + L +WYGESH L V+L++ GE +TLLGRNG G+TTTLR+IMG++ R G+I + Sbjct: 40 LLSVRGLYAWYGESHALQGVDLDIWPGETITLLGRNGVGKTTTLRAIMGIIRKRTGTITL 99 Query: 81 NGQETINLATHKIAHYGVGYCPEERGIFSSLSAEENLMLPPFVSK---TDKGMSIDEIYE 137 +G++ + + H+IA+ G+G+ PEERGIF+SL+ ENL+LPP V+K + MS+DEIYE Sbjct: 100 DGKDIMRVPLHRIAYEGLGFVPEERGIFASLNVHENLLLPPVVAKGGGSQGAMSLDEIYE 159 Query: 138 MFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQALARMITT 197 +FPNL ERRNS GT+LSGGEQQMLA+ARILRTG ++LLLDE +EGLAPVIVQ + ++ Sbjct: 160 LFPNLYERRNSPGTKLSGGEQQMLAIARILRTGVKVLLLDEPTEGLAPVIVQRIGDVLVE 219 Query: 198 LKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNELLGV 252 LK +G T+++VEQNFRFAA +ADRFY+M+HG + ++F +++L A+M L + LGV Sbjct: 220 LKKRGMTVLLVEQNFRFAAKVADRFYLMDHGVVTDNFPTTELPARMAALTQALGV 274 >RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 239 Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 152/243 (62%), Gaps = 10/243 (4%) Query: 15 SSSAPLVLQISDLQSWYGESHILHNVNLNVHQGEVVTLLGRNGAGRTTTLRSIMGLVGTR 74 +++ P+ L++ L ++YG+SHILH V+L+V +GE+V LLGRNG GR+T +SIMG+V Sbjct: 2 AATTPM-LEVRGLHAYYGKSHILHGVDLHVGEGEIVALLGRNGVGRSTLAKSIMGMVRC- 59 Query: 75 KGSIKINGQETINLATHKIAHYGVGYCPEERGIFSSLSAEENLML-----PPFVSKTDKG 129 +G I + G++ L T ++AH G+GY PE R IF +L+ +NL+L P + Sbjct: 60 EGHILLRGKDVRGLRTFEVAHRGIGYVPENRDIFPTLTVRQNLLLGEKRNP---RQPRPR 116 Query: 130 MSIDEIYEMFPNLKERRNSQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQ 189 D++Y +FP LKER ++ LSGGEQQML + R L +++DE +EGLAP+IV Sbjct: 117 WQFDDMYRLFPRLKEREHTPAGVLSGGEQQMLTLCRTLMGDPDFVIIDEPTEGLAPLIVA 176 Query: 190 ALARMITTLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVESFASSQLEAKMQTLNEL 249 + + TLKA+G ++++VEQ A ++ R YVM HGQIV + L+A + E Sbjct: 177 QVGEYLKTLKARGISVLLVEQKLAIALDISQRVYVMGHGQIVFEGTPADLKADARVRQEW 236 Query: 250 LGV 252 L V Sbjct: 237 LEV 239