BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0303.p         (175 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2309 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp...   188   4e-48
RSp1509 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans...   151   8e-37

>PA2309 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport
           systems, periplasmic components Pae Pseudomonas
           aeruginosa
          Length = 340

 Score =  188 bits (478), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 87/174 (50%), Positives = 127/174 (72%), Gaps = 1/174 (0%)

Query: 2   FGKEDFKRFDSISVSLSHPDATAALIAGGSEINAHFSSPPFQYQALENKNVHKVISSYDI 61
           +G + F R D  +V+L HPDATAAL+AGG+E+  HFS+PPFQ QAL N  VH V+ SY++
Sbjct: 168 WGDKQFDRLDKYTVALPHPDATAALVAGGTELTGHFSNPPFQDQALANPKVHVVLDSYEL 227

Query: 62  MGGPATFNVLYTTQKFHDENPKTYRAFYKALVEAAEFVRNNKAKAADTFIRVQKSKLSPA 121
           +G P +  VL+ T+KF  +NPKTYRAF +AL EAA F +N+KA AADT+IRV  +K+  A
Sbjct: 228 LG-PNSPTVLFATEKFRQDNPKTYRAFVEALKEAAAFAQNDKAAAADTYIRVTGAKIDRA 286

Query: 122 FVRKIVEDPEINFTVSPERTFVYAEQLHALGVLKNRASSWKDYFFEEAYAQPGS 175
            + KI+ +P++ F+V+P+ T+  AE L+ +G ++N+ +SW+DYFF++     GS
Sbjct: 287 ALLKIIANPQVEFSVTPKNTYPLAEFLYRVGAIRNKPASWQDYFFQDGAPLQGS 340


>RSp1509 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport
           systems, periplasmic components Rso Ralstonia
           solanacearum
          Length = 346

 Score =  151 bits (381), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 108/174 (62%), Gaps = 1/174 (0%)

Query: 2   FGKEDFKRFDSISVSLSHPDATAALIAGGSEINAHFSSPPFQYQALENKNVHKVISSYDI 61
           FG + F + D I+V L HPDATA ++AGGS+IN+H +SPPF Y       +H+V ++ D+
Sbjct: 174 FGDKQFNKLDPITVPLPHPDATAVMLAGGSQINSHMASPPFSYAEAAAPGLHRVFNTVDV 233

Query: 62  MGGPATFNVLYTTQKFHDENPKTYRAFYKALVEAAEFVRNNKAKAADTFIRVQKSKLSPA 121
           +G   T ++ YT++KF++ NPK   AF  AL EA   +  +KAKAA  +I   K K SP 
Sbjct: 234 LGN-ITLDMTYTSKKFYEANPKLSAAFVAALDEANALIARDKAKAAQIYIAQSKVKSSPD 292

Query: 122 FVRKIVEDPEINFTVSPERTFVYAEQLHALGVLKNRASSWKDYFFEEAYAQPGS 175
            V+KI++DP+  FT +P     YAE +  +G +K + +SWKD FF     + GS
Sbjct: 293 EVKKILDDPDSRFTTTPVGVAHYAEFMQRVGTVKGKPASWKDLFFPTVQNRQGS 346