BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0243.p (1490 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3033 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/1... 1634 0.0 NMA0141 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/1... 1489 0.0 NMB0133 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/1... 1488 0.0 PA4269 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/16... 1389 0.0 STM4154 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/1... 1376 0.0 >RSc3033 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Rso Ralstonia solanacearum Length = 1409 Score = 1634 bits (4232), Expect = 0.0, Method: Compositional matrix adjust. Identities = 780/918 (84%), Positives = 843/918 (91%), Gaps = 5/918 (0%) Query: 1 MKALLDLFKQVQQNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 MKALLDLF+QVQQ EQFDAIKIGLASP+KIRSWSFGEVKKPETINYRTFKPERDGLFCAK Sbjct: 1 MKALLDLFRQVQQEEQFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELA+PTAHIWFLKSL Sbjct: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELAAPTAHIWFLKSL 120 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGD-DFIAF 179 PSRLGMVLDMTLRDIERVLYFEA+VV +PGMTPLKK QIMSEDDY AK +EYG+ +F+A Sbjct: 121 PSRLGMVLDMTLRDIERVLYFEAFVVVEPGMTPLKKSQIMSEDDYLAKCDEYGEGEFVAL 180 Query: 180 MGAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPDWMIM 239 MGAEGIRELLR IDI+++ ET+R EL+ + SEAKIKK+AKRLKVLEAFQRSGIKPDWMI+ Sbjct: 181 MGAEGIRELLRGIDIEKQIETIRAELQATGSEAKIKKFAKRLKVLEAFQRSGIKPDWMIL 240 Query: 240 EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRML 299 EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL+EL+APEII RNEKRML Sbjct: 241 EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRML 300 Query: 300 QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP 359 QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP Sbjct: 301 QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP 360 Query: 360 QLKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREH 419 LKLHQCGLPKLMALELFKPFIF+KLE MG++TTIKAAKK VE+Q PVVWDILEEVIREH Sbjct: 361 TLKLHQCGLPKLMALELFKPFIFHKLETMGIATTIKAAKKEVESQTPVVWDILEEVIREH 420 Query: 420 PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQME 479 PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLS+EAQME Sbjct: 421 PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME 480 Query: 480 ARTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDN 539 ARTLMLASNN+LFP+NG+PSIVPSQD+VLGLYY TR+ ING+ EGM F D+SEVIRAY+N Sbjct: 481 ARTLMLASNNVLFPANGDPSIVPSQDVVLGLYYTTRDKINGRGEGMTFADISEVIRAYEN 540 Query: 540 KEVELATRITVRIVEH----PKDPVTGEFVRTVKRYETTIGRAILSEILPKGLPFSVLNR 595 KEVELA+R+ VRI E+ P+ F + TT+GRAILSEILPKGLPFSVLN+ Sbjct: 541 KEVELASRVNVRITEYDLVNPEADGDARFAPKITLQATTVGRAILSEILPKGLPFSVLNK 600 Query: 596 ALKKKEISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLI 655 LKKKEIS+LINT+FRKCGLR TV+FAD+L+QSGFRLATRAGISI +DDMLVPP K +I Sbjct: 601 PLKKKEISRLINTAFRKCGLRETVIFADKLLQSGFRLATRAGISIAIDDMLVPPAKEKII 660 Query: 656 AAAESEVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEDVITREGKKT 715 + A ++VK+ ++QY SGLVT ERYN VVDIWG AGD+VGKAMM+QL+ EDV+ R GK Sbjct: 661 SEAAAKVKEYDKQYMSGLVTDQERYNNVVDIWGAAGDQVGKAMMEQLQTEDVVDRHGKTV 720 Query: 716 TQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI 775 QESFN+IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI Sbjct: 721 KQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI 780 Query: 776 STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEA 835 STHGARKGLADTALKTANSGYLTRRLVDVTQDLVV+EDDCGTSNG AMKALVEGGEVIEA Sbjct: 781 STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVIEA 840 Query: 836 LRDRILGRVAATDIVNPEDQATLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGL 895 LRDRILGRV D+VNPE Q T EAGTLLDED VE I+ +G+DEVKVRTPLTCDTRYGL Sbjct: 841 LRDRILGRVVVNDVVNPETQETAIEAGTLLDEDLVELIDSIGVDEVKVRTPLTCDTRYGL 900 Query: 896 CAKCYGRDLGRGDXMNRG 913 CAKCYGRDLGRG +N G Sbjct: 901 CAKCYGRDLGRGVLVNSG 918 Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/474 (86%), Positives = 436/474 (91%) Query: 978 GRMVQTGPSVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVR 1037 GR + G VNSGEAVGV+AAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAK+ GTVR Sbjct: 906 GRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKATGTVR 965 Query: 1038 FTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKAGTALA 1097 FTATMRYVTN KGEQIVISRSGE LITDD GRERERHK+PYGATL+V DG +IKAGT LA Sbjct: 966 FTATMRYVTNAKGEQIVISRSGEALITDDHGRERERHKIPYGATLLVHDGQSIKAGTQLA 1025 Query: 1098 TWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGPSSKVMRPQV 1157 TWDPLTRPII+EYSGT+KFENVEEG TVAKQ+DEVTGLSTLVVIDAKRR +SK +RPQV Sbjct: 1026 TWDPLTRPIISEYSGTIKFENVEEGVTVAKQMDEVTGLSTLVVIDAKRRTSASKGIRPQV 1085 Query: 1158 KLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGGL 1217 KLL+ G EVKI GT+HSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGGL Sbjct: 1086 KLLDSSGAEVKIPGTDHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGGL 1145 Query: 1218 PRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTKHEFLITKDKQVLVH 1277 PRVAELFEARSPKDA +LAEVTGT +FGK+TKGKQRL ITD++G HEFLI K+KQVLVH Sbjct: 1146 PRVAELFEARSPKDAAVLAEVTGTTSFGKDTKGKQRLVITDLDGNAHEFLIAKEKQVLVH 1205 Query: 1278 DGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVRQ 1337 DGQVVNKGEMIV+GPADP DILRL G+E LA YIVDEVQDVYRLQGVKINDKHIEVIVRQ Sbjct: 1206 DGQVVNKGEMIVEGPADPHDILRLKGVEELATYIVDEVQDVYRLQGVKINDKHIEVIVRQ 1265 Query: 1338 MLRRVQVVEPGDTNYITGEQVERSELLDENDRVTAEGKIPATYENVLLGITKASLSTDSF 1397 MLRRVQ+V+ GDT +I GEQVERSELLDEND+V AEGK PATYEN+LLGITKASLSTDSF Sbjct: 1266 MLRRVQIVDVGDTKFIPGEQVERSELLDENDKVIAEGKRPATYENLLLGITKASLSTDSF 1325 Query: 1398 ISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKD 1451 ISAASFQETTRVLTEAAIMGK D LRGLKENVIVGRLIPAGTGLA+HRARK K+ Sbjct: 1326 ISAASFQETTRVLTEAAIMGKVDDLRGLKENVIVGRLIPAGTGLAYHRARKAKE 1379 >NMA0141 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit NmA Neisseria meningitidis Z2491 Length = 1391 Score = 1489 bits (3854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 717/913 (78%), Positives = 803/913 (87%), Gaps = 4/913 (0%) Query: 4 LLDLFKQVQ---QNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 LL+LF +Q E+FDAIKIG+ASP+ IRSWS+GEVKKPETINYRTFKPERDGLFCAK Sbjct: 3 LLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFCAK 62 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGP+KDYECLCGKYKRLK +GV CEKCGVEVTL+KVRRERMGHIELA+P AHIWFLKSL Sbjct: 63 IFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLKSL 122 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFIAFM 180 PSRLGMVLDMTLRDIERVLYFEA+VVTDPGMTPL++ Q+++EDDY K +EYGDDF A M Sbjct: 123 PSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDAKM 182 Query: 181 GAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPDWMIME 240 GAEGIRELLR++++ E E LRQEL+ + S+ KIKK AKRLKVLEAF RSG+K +WMIM+ Sbjct: 183 GAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMIMD 242 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL+EL AP+II RNEKRMLQ Sbjct: 243 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRMLQ 302 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 EAVDSLLDNGRRGKAMTGANKRPLKSLA+MIKGKGGRFRQNLLGKRVDYSGRSVI VGP Sbjct: 303 EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPY 362 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREHP 420 L+LHQCGLPK MALELFKPFIF+KLE GL++T+KAAKKLVE + P VWDILEEVIREHP Sbjct: 363 LRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIREHP 422 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 +MLNRAPTLHRLGIQAFEP+LIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLS+EAQMEA Sbjct: 423 IMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA 482 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDNK 540 RTLMLASNN+L P+NGEP IVPSQDIVLGLYY TR+ IN K EG +F DV EV RAY K Sbjct: 483 RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTK 542 Query: 541 EVELATRITVRIVEHPKDPVTGEFVRTVKRYETTIGRAILSEILPKGLPFSVLNRALKKK 600 +VEL T+ITVR+ E K+ GEF V RYETT+GRA+LSEILPKGLPF +N+ALKKK Sbjct: 543 QVELGTKITVRLREWVKNE-AGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKKK 601 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLIAAAES 660 EISKLIN SFR CGLR TV+FAD LM +GF A + GISI VDDM +P +KA L+A A + Sbjct: 602 EISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANA 661 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEDVITREGKKTTQESF 720 EVK+IE QY GLVT GERYNKVVDIWG+AGD++ KAMMD L + VI R+G + QESF Sbjct: 662 EVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQESF 721 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N+IYMMADSGARGSAAQI+QL+GMRGLMAKPDGSIIETPIT+NFREGL VLQYFI+THGA Sbjct: 722 NSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGA 781 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDVTQDLVV+EDDCGTS+G MKA+V+GG+VIEALRDRI Sbjct: 782 RKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRI 841 Query: 841 LGRVAATDIVNPEDQATLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGLCAKCY 900 LGRV A+D+V+P TL EAGTLL E V+ I++ G+DEVKVRTP+TC TR+GLCA CY Sbjct: 842 LGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCY 901 Query: 901 GRDLGRGDXMNRG 913 GRDL RG +N G Sbjct: 902 GRDLARGKLVNAG 914 Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/482 (73%), Positives = 410/482 (85%), Gaps = 3/482 (0%) Query: 978 GRMVQTGPSVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVR 1037 GR + G VN+GEAVGV+AAQSIGEPGTQLTMRTFHIGGAASRAA AS VEAKSNGT R Sbjct: 902 GRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTAR 961 Query: 1038 FTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKAGTALA 1097 F++ MRYV N KGE +VI RS EV+I DD+GRERERHKVPYGA L+V+DG+ IKAG LA Sbjct: 962 FSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLA 1021 Query: 1098 TWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGPS-SKVMRPQ 1156 TWDP TRP+ITE++G VKFENVEEG TVAKQ D+VTGLSTLVVID KRR S SK++RP Sbjct: 1022 TWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPT 1081 Query: 1157 VKLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGG 1216 VKLL+E G E+ I GT V++ F VGA+ITV++GQ++ G+VLARIP S KTRDITGG Sbjct: 1082 VKLLDENGVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGG 1141 Query: 1217 LPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTKHEFLITKDKQVLV 1276 LPRVAELFEAR PKDAGMLAE+TGTV+FGKETKGKQRL +TD++G +E LI+K+KQ+LV Sbjct: 1142 LPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILV 1201 Query: 1277 HDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVR 1336 HDGQVVN+GE IVDG DP DILRL GIEALARYIV EVQ+VYRLQGVKI+DKHIEVI+R Sbjct: 1202 HDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIR 1261 Query: 1337 QMLRRVQVVEPGDTNYITGEQVERSELLDENDRVTAEGKIPATYENVLLGITKASLSTDS 1396 QMLRRV + + G+T +ITGEQVER +++ N++ EGK PA YENVLLGITKASLSTDS Sbjct: 1262 QMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTDS 1321 Query: 1397 FISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEAE 1456 FISAASFQETTRVLTEAAIMGK+D LRGLKENVIVGRLIPAGTGL +HR+R ++ W+ Sbjct: 1322 FISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQ--WQGV 1379 Query: 1457 ER 1458 E+ Sbjct: 1380 EQ 1381 >NMB0133 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Nme Neisseria meningitidis MC58 Length = 1391 Score = 1488 bits (3851), Expect = 0.0, Method: Compositional matrix adjust. Identities = 717/913 (78%), Positives = 802/913 (87%), Gaps = 4/913 (0%) Query: 4 LLDLFKQVQ---QNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 LL+LF +Q E+FDAIKIG+ASP+ IRSWS+GEVKKPETINYRTFKPERDGLFCAK Sbjct: 3 LLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFCAK 62 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGP+KDYECLCGKYKRLK +GV CEKCGVEVTL+KVRRERMGHIELA+P AHIWFLKSL Sbjct: 63 IFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLKSL 122 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFIAFM 180 PSRLGMVLDMTLRDIERVLYFEA+VVTDPGMTPL++ Q+++EDDY K +EYGDDF A M Sbjct: 123 PSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDAKM 182 Query: 181 GAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPDWMIME 240 GAEGIRELLR++++ E E LRQEL+ + S+ KIKK AKRLKVLEAF RSG+K +WMIM+ Sbjct: 183 GAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMIMD 242 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL+EL AP+II RNEKRMLQ Sbjct: 243 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRMLQ 302 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 EAVDSLLDNGRRGKAMTGANKRPLKSLA+MIKGKGGRFRQNLLGKRVDYSGRSVI VGP Sbjct: 303 EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPY 362 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREHP 420 L+LHQCGLPK MALELFKPFIF+KLE GL++T+KAAKKLVE + P VWDILEEVIREHP Sbjct: 363 LRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIREHP 422 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 +MLNRAPTLHRLGIQAFEP+LIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLS+EAQMEA Sbjct: 423 IMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA 482 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDNK 540 RTLMLASNN+L P+NGEP IVPSQDIVLGLYY TR+ IN K EG +F DV EV RAY K Sbjct: 483 RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTK 542 Query: 541 EVELATRITVRIVEHPKDPVTGEFVRTVKRYETTIGRAILSEILPKGLPFSVLNRALKKK 600 +VEL T+ITVR+ E K+ GEF V RYETT+GRA+LSEILPKGLPF +N+ALKKK Sbjct: 543 QVELGTKITVRLREWVKNE-AGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKKK 601 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLIAAAES 660 EISKLIN SFR CGLR TV+FAD LM +GF A + GISI VDDM +P +KA L+A A + Sbjct: 602 EISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANA 661 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEDVITREGKKTTQESF 720 EVK+IE QY GLVT GERYNKVVDIWG+AGD++ KAMMD L + VI R G + QESF Sbjct: 662 EVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQESF 721 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N+IYMMADSGARGSAAQI+QL+GMRGLMAKPDGSIIETPIT+NFREGL VLQYFI+THGA Sbjct: 722 NSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGA 781 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDVTQDLVV+EDDCGTS+G MKA+V+GG+VIEALRDRI Sbjct: 782 RKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRI 841 Query: 841 LGRVAATDIVNPEDQATLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGLCAKCY 900 LGRV A+D+V+P TL EAGTLL E V+ I++ G+DEVKVRTP+TC TR+GLCA CY Sbjct: 842 LGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCY 901 Query: 901 GRDLGRGDXMNRG 913 GRDL RG +N G Sbjct: 902 GRDLARGKLVNAG 914 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/482 (73%), Positives = 410/482 (85%), Gaps = 3/482 (0%) Query: 978 GRMVQTGPSVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVR 1037 GR + G VN+GEAVGV+AAQSIGEPGTQLTMRTFHIGGAASRAA AS VEAKSNGT R Sbjct: 902 GRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTAR 961 Query: 1038 FTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKAGTALA 1097 F++ MRYV N KGE +VI RS EV+I DD+GRERERHKVPYGA L+V+DG+ IKAG LA Sbjct: 962 FSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLA 1021 Query: 1098 TWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGPS-SKVMRPQ 1156 TWDP TRP+ITE++G VKFENVEEG TVAKQ D+VTGLSTLVVID KRR S SK++RP Sbjct: 1022 TWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPT 1081 Query: 1157 VKLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGG 1216 VKLL+E G E+ I GT V++ F VGA+ITV++GQ++ G+VLARIP S KTRDITGG Sbjct: 1082 VKLLDENGVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGG 1141 Query: 1217 LPRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTKHEFLITKDKQVLV 1276 LPRVAELFEAR PKDAGMLAE+TGTV+FGKETKGKQRL +TD++G +E LI+K+KQ+LV Sbjct: 1142 LPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILV 1201 Query: 1277 HDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVR 1336 HDGQVVN+GE IVDG DP DILRL GIEALARYIV EVQ+VYRLQGVKI+DKHIEVI+R Sbjct: 1202 HDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIR 1261 Query: 1337 QMLRRVQVVEPGDTNYITGEQVERSELLDENDRVTAEGKIPATYENVLLGITKASLSTDS 1396 QMLRRV + + G+T +ITGEQVER +++ N++ EGK PA YENVLLGITKASLSTDS Sbjct: 1262 QMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTDS 1321 Query: 1397 FISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEAE 1456 FISAASFQETTRVLTEAAIMGK+D LRGLKENVIVGRLIPAGTGL +HR+R ++ W+ Sbjct: 1322 FISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQ--WQEV 1379 Query: 1457 ER 1458 E+ Sbjct: 1380 EQ 1381 >PA4269 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Pae Pseudomonas aeruginosa Length = 1399 Score = 1389 bits (3594), Expect = 0.0, Method: Compositional matrix adjust. Identities = 659/913 (72%), Positives = 769/913 (84%), Gaps = 1/913 (0%) Query: 1 MKALLDLFKQVQQNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 MK LL+L K Q E+FDAI+IGLASP+ IRSWSFGEVKKPETINYRTFKPERDGLFCAK Sbjct: 1 MKDLLNLLKNQGQIEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGP+KDYECLCGKYKRLKHRGVICEKCGVEV LAKVRRERMGHIELASP AHIWFLKSL Sbjct: 61 IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMGHIELASPVAHIWFLKSL 120 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFIAFM 180 PSR+G++LDMTLRDIERVLYFE+YVV DPGMT L+K Q+++++ Y EE+GDDF A M Sbjct: 121 PSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM 180 Query: 181 GAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPDWMIME 240 GAE + ELL +ID++ E LR+E+ + SE KIKK +KRLK++EAFQ SG KP+WM++ Sbjct: 181 GAEAVHELLNAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNKPEWMVLT 240 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL++L AP+II RNEKRMLQ Sbjct: 241 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ 300 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 EAVD+LLDNGRRG+A+TG+NKRPLKSLA+MIKGK GRFRQNLLGKRVDYSGRSVI VGP Sbjct: 301 EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT 360 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREHP 420 L+LHQCGLPK MALELFKPFIF KLE G++TTIKAAKK+VE + P VWD+L EVIREHP Sbjct: 361 LRLHQCGLPKKMALELFKPFIFGKLEGRGMATTIKAAKKMVERELPEVWDVLAEVIREHP 420 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 V+LNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAA+NADFDGDQMAVHVPL++EAQ+EA Sbjct: 421 VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA 480 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDNK 540 R LM+++NNIL P+NGEP IVPSQD+V+GLYY TREAIN K EGM F D+ EV RAY + Sbjct: 481 RALMMSTNNILSPANGEPIIVPSQDVVMGLYYMTREAINAKGEGMAFADLQEVDRAYRSG 540 Query: 541 EVELATRITVRIVEHPKDPVTGEFVRTVKRYETTIGRAILSEILPKGLPFSVLNRALKKK 600 + L R+ VRI E K G+ + +TT+GRA+L +++P GLPF V+N+++KKK Sbjct: 541 QASLHARVKVRINEKIKGE-DGQLTANTRIVDTTVGRALLFQVVPAGLPFDVVNQSMKKK 599 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLIAAAES 660 ISKLIN +R GL+ TV+FADQLM +GF +T +G+SI V+D ++P +KA +I AA Sbjct: 600 AISKLINHCYRVVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIINAATD 659 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEDVITREGKKTTQESF 720 EVK+IE QY+SGLVT GE+YNKV+D+W KA DEV KAMM L E V+ REGK+ QESF Sbjct: 660 EVKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVVDREGKEVDQESF 719 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N++YMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA Sbjct: 720 NSMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 779 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDV QDLVV E DCGT +G M +EGG+V+E L +R+ Sbjct: 780 RKGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTEHGLLMSPHIEGGDVVEPLGERV 839 Query: 841 LGRVAATDIVNPEDQATLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGLCAKCY 900 LGRV A D+ P + AGTL+DE V+ +E M +DEV VR+P+TC+TR+G+CA CY Sbjct: 840 LGRVIARDVFKPGSDEVIVPAGTLIDEKWVDFLEVMSVDEVVVRSPITCETRHGICAMCY 899 Query: 901 GRDLGRGDXMNRG 913 GRDL RG +N G Sbjct: 900 GRDLARGHRVNIG 912 Score = 568 bits (1465), Expect = e-161, Method: Compositional matrix adjust. Identities = 285/491 (58%), Positives = 374/491 (76%), Gaps = 2/491 (0%) Query: 978 GRMVQTGPSVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVR 1037 GR + G VN GEAVGV+AAQSIGEPGTQLTMRTFHIGGAASR + A +V+ K+ GT+R Sbjct: 900 GRDLARGHRVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADNVQVKNGGTIR 959 Query: 1038 FTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKAGTALA 1097 +++V G + +SRSGE+ + DD GRERER+K+PYGA + VK+G + G +A Sbjct: 960 LH-NLKHVVRADGALVAVSRSGELAVADDFGRERERYKLPYGAVISVKEGDKVDPGAIVA 1018 Query: 1098 TWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGPSSKVMRPQV 1157 WDP T PI+TE GTV F +EEG TV +Q DE+TGL+ + V+D K R + K +RP V Sbjct: 1019 KWDPHTHPIVTEVDGTVAFVGMEEGITVKRQTDELTGLTNIEVMDPKDRPAAGKDIRPAV 1078 Query: 1158 KLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGGL 1217 KL++ G+++ + GT+ AL+ + DG +V +G+V+ARIP E+ KTRDITGGL Sbjct: 1079 KLIDAAGKDLLLPGTDVPAQYFLPANALVNLTDGAKVSIGDVVARIPQETSKTRDITGGL 1138 Query: 1218 PRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTK-HEFLITKDKQVLV 1276 PRVA+LFEAR PK+ +LAE++GT++FGKETKGK+RL IT +G+ +E LI K + + V Sbjct: 1139 PRVADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPNDGSDPYEELIPKWRHLNV 1198 Query: 1277 HDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVR 1336 +G+ VN+GE+I DGP++P DILRLLG+ +LA+YIV+E+QDVYRLQGVKINDKHIE I+R Sbjct: 1199 FEGEQVNRGEVISDGPSNPHDILRLLGVSSLAKYIVNEIQDVYRLQGVKINDKHIETILR 1258 Query: 1337 QMLRRVQVVEPGDTNYITGEQVERSELLDENDRVTAEGKIPATYENVLLGITKASLSTDS 1396 QMLR+V+V E GD+++I G+QVE +++L+EN+++ E K PA YE VLLGITKASLST+S Sbjct: 1259 QMLRKVEVSESGDSSFIKGDQVELTQVLEENEQLGTEDKFPAKYERVLLGITKASLSTES 1318 Query: 1397 FISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEAE 1456 FISAASFQETTRVLTEAA+ GK+D LRGLKENV+VGRLIPAGTGLA+H RK + Sbjct: 1319 FISAASFQETTRVLTEAAVTGKRDFLRGLKENVVVGRLIPAGTGLAYHSERKRQRDLGKP 1378 Query: 1457 ERAALLEAERA 1467 +R + EAE A Sbjct: 1379 QRVSASEAEAA 1389 >STM4154 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit Sty Salmonella typhimurium LT2 Length = 1407 Score = 1376 bits (3562), Expect = 0.0, Method: Compositional matrix adjust. Identities = 655/913 (71%), Positives = 762/913 (83%), Gaps = 1/913 (0%) Query: 1 MKALLDLFKQVQQNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK 60 MK LL K + E+FDAIKI LASPD IRSWSFGEVKKPETINYRTFKPERDGLFCA+ Sbjct: 1 MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR 60 Query: 61 IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL 120 IFGP+KDYECLCGKYKRLKHRGVICEKCGVEVT KVRRERMGHIELASPTAHIWFLKSL Sbjct: 61 IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL 120 Query: 121 PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFIAFM 180 PSR+G++LDM LRDIERVLYFE+YVV + GMT L++ QI++E+ Y EE+GD+F A M Sbjct: 121 PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKM 180 Query: 181 GAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPDWMIME 240 GAE I+ LL+S+D+++E ETLR+EL ++ SE K KK KR+K+LEAF +SG KP+WMI+ Sbjct: 181 GAEAIQALLKSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT 240 Query: 241 VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ 300 VLPVLPP+LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRL++L AP+II RNEKRMLQ Sbjct: 241 VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ 300 Query: 301 EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ 360 EAVD+LLDNGRRG+A+TG+NKRPLKSLA+MIKGK GRFRQNLLGKRVDYSGRSVI VGP Sbjct: 301 EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY 360 Query: 361 LKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREHP 420 L+LHQCGLPK MALELFKPFI+ KLEL GL+TTIKAAKK+VE +E VVWDIL+EVIREHP Sbjct: 361 LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP 420 Query: 421 VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA 480 V+LNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAA+NADFDGDQMAVHVPL++EAQ+EA Sbjct: 421 VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA 480 Query: 481 RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDNK 540 R LM+++NNIL P+NGEP IVPSQD+VLGLYY TR+ +N K EGM+ E R Y Sbjct: 481 RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG 540 Query: 541 EVELATRITVRIVEHPKDPVTGEFVRTVKRYETTIGRAILSEILPKGLPFSVLNRALKKK 600 L R+ VRI E+ KD GEFV +TT+GRAIL I+PKGLPFS++N+AL KK Sbjct: 541 LASLHARVKVRITEYEKDE-NGEFVAHTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKK 599 Query: 601 EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLIAAAES 660 ISK++NT +R GL+ TV+FADQ M +GF A R+G S+ +DDM++P +K +I+ AE+ Sbjct: 600 AISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEA 659 Query: 661 EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEDVITREGKKTTQESF 720 EV +I++Q+ SGLVTAGERYNKV+DIW A D V KAMMD L+ E VI R+G++ Q SF Sbjct: 660 EVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEQQVSF 719 Query: 721 NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 780 N+IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA Sbjct: 720 NSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA 779 Query: 781 RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEALRDRI 840 RKGLADTALKTANSGYLTRRLVDV QDLVV EDDCGT G M ++EGG+V E LRDR+ Sbjct: 780 RKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGILMTPVIEGGDVKEPLRDRV 839 Query: 841 LGRVAATDIVNPEDQATLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGLCAKCY 900 LGRV A D++ P L TLL E + +E +D VKVR+ ++CDT +G+CA CY Sbjct: 840 LGRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEANSVDAVKVRSVVSCDTDFGVCAHCY 899 Query: 901 GRDLGRGDXMNRG 913 GRDL RG +N+G Sbjct: 900 GRDLARGHIINKG 912 Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust. Identities = 267/494 (54%), Positives = 358/494 (72%), Gaps = 2/494 (0%) Query: 978 GRMVQTGPSVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVR 1037 GR + G +N GEA+GV+AAQSIGEPGTQLTMRTFHIGGAASRAA SS++ K+ G+++ Sbjct: 900 GRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIK 959 Query: 1038 FTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKAGTALA 1097 + ++ V N G+ ++ SR+ E+ + D+ GR +E +KVPYGA + DG + G +A Sbjct: 960 LS-NVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVA 1018 Query: 1098 TWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGPSSKVMRPQV 1157 WDP T P+ITE SG ++F ++ +G T+ +Q DE+TGLS+LVV+D+ R K +RP + Sbjct: 1019 NWDPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPAL 1078 Query: 1158 KLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGGL 1217 K+++ QG +V I GT+ A++ ++DG Q+ G+ LARIP ES T+DITGGL Sbjct: 1079 KIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGL 1138 Query: 1218 PRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTK-HEFLITKDKQVLV 1276 PRVA+LFEAR PK+ +LAE+ G V+FGKETKGK+RL IT ++G+ +E +I K +Q+ V Sbjct: 1139 PRVADLFEARRPKEPAILAEIAGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNV 1198 Query: 1277 HDGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVR 1336 +G+ V +G++I DGP P DILRL G+ A+ RYIV+EVQDVYRLQGVKINDKHIEVIVR Sbjct: 1199 FEGERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVR 1258 Query: 1337 QMLRRVQVVEPGDTNYITGEQVERSELLDENDRVTAEGKIPATYENVLLGITKASLSTDS 1396 QMLR+ + G ++++ GEQVE S + N + A GK+ AT+ LLGITKASL+T+S Sbjct: 1259 QMLRKATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVGATFSRDLLGITKASLATES 1318 Query: 1397 FISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEAE 1456 FISAASFQETTRVLTEAA+ GK+D LRGLKENVIVGRLIPAGTG A+H+ R + A + Sbjct: 1319 FISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEQ 1378 Query: 1457 ERAALLEAERASRS 1470 + AE AS S Sbjct: 1379 PATPQVTAEDASAS 1392