BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0242.p         (179 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1385 [S] COG0762 Predicted integral membrane protein Rso Rals...   114   1e-25
yggT [S] COG0762 Predicted integral membrane protein Eco Escheri...    79   5e-15
ZyggT [S] COG0762 Predicted integral membrane protein EcZ Escher...    79   5e-15
ECs3828 [S] COG0762 Predicted integral membrane protein Ecs Esch...    79   5e-15
VC0459 [S] COG0762 Predicted integral membrane protein Vch Vibri...    74   1e-13

>RSp1385 [S] COG0762 Predicted integral membrane protein Rso Ralstonia
           solanacearum
          Length = 183

 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 95/158 (60%), Gaps = 4/158 (2%)

Query: 4   SIFTMIVNAVASILAGVLLLRFWMQVVRVRPPQSVGQFVYQLSDWLVLPLRRVMPG-GRH 62
            I   +++ + ++    LLLR W Q VR+ P   + Q ++QL+ WLV PLRR++P  G  
Sbjct: 4   DITRFLLDTLFTLFGAALLLRAWTQAVRLSPRNPLSQSIFQLTGWLVHPLRRIIPATGYI 63

Query: 63  DWASLLGAFLIVLLSIIAILGFQSGFDFKLI---FLVALERFFEWICYGFMATLIIEAVF 119
           DW+SL+ A+L  L  ++ ++  +      L+   FL AL    +W     +   I+ A+ 
Sbjct: 64  DWSSLVAAYLTALAYLVLLVAARGASPLGLLPFGFLAALFTVLKWGFNVLVWITIVSAIL 123

Query: 120 SWVNPHAPLAPFVRALNDPLLRPLRKIIPPLGGVDLSP 157
           SWV PHAP+A  +  L DPLLRP+R+++PP+GG+DLSP
Sbjct: 124 SWVAPHAPMAAVLNTLIDPLLRPIRRVLPPMGGLDLSP 161


>yggT [S] COG0762 Predicted integral membrane protein Eco Escherichia
           coli K12
          Length = 188

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 94/165 (56%), Gaps = 4/165 (2%)

Query: 4   SIFTMIVNAVASILAGVLLLRFWMQVVRVRPPQSVGQFVYQLSDWLVLPLRRVMPG-GRH 62
           +  T +++ V  +   VLLLR WMQ           QFV +++  ++ PLRRV+P  G  
Sbjct: 2   NTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGPI 61

Query: 63  DWASLLGAFLIVLLSIIAILGFQSGFDFKLIFLVALERFFEWICYGFMATLIIEAVFSWV 122
           D ASLL A+++  +   AI+ F+      +I++  L    + I       L++ A+ SWV
Sbjct: 62  DSASLLVAYILSFIK--AIVLFKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWV 119

Query: 123 NP-HAPLAPFVRALNDPLLRPLRKIIPPLGGVDLSPLVLLILLQI 166
           +   +P+   +  L DPLLRP+R+++P +GG+D SP++L++LL +
Sbjct: 120 SQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYV 164


>ZyggT [S] COG0762 Predicted integral membrane protein EcZ Escherichia
           coli O157:H7 EDL933
          Length = 188

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 94/165 (56%), Gaps = 4/165 (2%)

Query: 4   SIFTMIVNAVASILAGVLLLRFWMQVVRVRPPQSVGQFVYQLSDWLVLPLRRVMPG-GRH 62
           +  T +++ V  +   VLLLR WMQ           QFV +++  ++ PLRRV+P  G  
Sbjct: 2   NTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGPI 61

Query: 63  DWASLLGAFLIVLLSIIAILGFQSGFDFKLIFLVALERFFEWICYGFMATLIIEAVFSWV 122
           D ASLL A+++  +   AI+ F+      +I++  L    + I       L++ A+ SWV
Sbjct: 62  DSASLLVAYILSFIK--AIVLFKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWV 119

Query: 123 NP-HAPLAPFVRALNDPLLRPLRKIIPPLGGVDLSPLVLLILLQI 166
           +   +P+   +  L DPLLRP+R+++P +GG+D SP++L++LL +
Sbjct: 120 SQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYV 164


>ECs3828 [S] COG0762 Predicted integral membrane protein Ecs Escherichia
           coli O157:H7
          Length = 188

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 94/165 (56%), Gaps = 4/165 (2%)

Query: 4   SIFTMIVNAVASILAGVLLLRFWMQVVRVRPPQSVGQFVYQLSDWLVLPLRRVMPG-GRH 62
           +  T +++ V  +   VLLLR WMQ           QFV +++  ++ PLRRV+P  G  
Sbjct: 2   NTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGPI 61

Query: 63  DWASLLGAFLIVLLSIIAILGFQSGFDFKLIFLVALERFFEWICYGFMATLIIEAVFSWV 122
           D ASLL A+++  +   AI+ F+      +I++  L    + I       L++ A+ SWV
Sbjct: 62  DSASLLVAYILSFIK--AIVLFKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWV 119

Query: 123 NP-HAPLAPFVRALNDPLLRPLRKIIPPLGGVDLSPLVLLILLQI 166
           +   +P+   +  L DPLLRP+R+++P +GG+D SP++L++LL +
Sbjct: 120 SQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYV 164


>VC0459 [S] COG0762 Predicted integral membrane protein Vch Vibrio cholerae
          Length = 185

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 94/169 (55%), Gaps = 11/169 (6%)

Query: 7   TMIVNAVASILAGVLLLRFWMQVVRVRPPQSVGQFVYQLSDWLVLPLRRVMPG-GRHDWA 65
           + ++N +  +   V++LR W+Q  R        QF+ + +  +V PLRRV+P  G  D A
Sbjct: 5   SFLINTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIPSIGSIDLA 64

Query: 66  SLLGAFLIVLLSIIAILGFQS------GFDFKLIFLVALERFFEWICYGFMATLIIEAVF 119
           +++ A+++ +L  +A++   S        DF  + L++L +    + +     L+I A+ 
Sbjct: 65  TIVFAYVLCVLKFMALVLIASSGSVSFSADFLFLGLLSLIKAAGGLLFW---VLLIRAIL 121

Query: 120 SWVNP-HAPLAPFVRALNDPLLRPLRKIIPPLGGVDLSPLVLLILLQIA 167
           SWV+   +P+      L +P+L P+R+IIP +GG DLS LVL I+LQ A
Sbjct: 122 SWVSQGRSPIEYVFHQLTEPMLAPIRRIIPVMGGFDLSVLVLFIVLQFA 170