BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0156.p (354 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1114 [MU] COG1538 Outer membrane protein Rso Ralstonia solana... 357 3e-98 PA2525 [MU] COG1538 Outer membrane protein Pae Pseudomonas aerug... 233 6e-61 RSp1200 [MU] COG1538 Outer membrane protein Rso Ralstonia solana... 209 8e-54 PA2837 [MU] COG1538 Outer membrane protein Pae Pseudomonas aerug... 175 1e-43 RSp1599 [MU] COG1538 Outer membrane protein Rso Ralstonia solana... 167 4e-41 >RSp1114 [MU] COG1538 Outer membrane protein Rso Ralstonia solanacearum Length = 508 Score = 357 bits (915), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 195/303 (64%), Positives = 240/303 (79%) Query: 1 VNVSYEVDLFGRVASTVDAATADAQRSEALFHSVLLALQADVAQQYFQVRELDAAAELYR 60 VSYE DLFGRV ++V+AA ADA+R EAL+ + L+LQADVAQ YF +R LDA L Sbjct: 162 TTVSYEADLFGRVRNSVNAADADAERVEALYRAARLSLQADVAQTYFSLRTLDAEEALLA 221 Query: 61 GTVELRQESLRLVQRRFDEGDISEVDVARARSELASAQSEALGIARQRATAEHALAILLG 120 TV R+E+L+LVQRRF GDI E+DVARA +ELA+A+S+ L +AR+RA EHALA LLG Sbjct: 222 RTVVGREEALKLVQRRFSTGDIGELDVARADAELATARSDRLDVARRRALLEHALATLLG 281 Query: 121 RTPAEFSLPPQPLTRLSVSVPAGLPSTLLERRPDIAAAERAMAAANARVGVAKSAFFPAL 180 + P+ F+L PL +V VP GLPS LLERRPD+AAAERAMAAANAR+GVA++AFFP L Sbjct: 282 KAPSGFTLGADPLQAANVRVPPGLPSALLERRPDVAAAERAMAAANARIGVARAAFFPQL 341 Query: 181 NLTGGLGYESAQLGDLFNWSSRTFLLGPLVGTALSMPLFDGGRRQAGVDRARASYEEQVA 240 LTGG G+ES +GDL WSSRT+LLGPLVGTALS+P+FDGG R AGV +ARA+YEE VA Sbjct: 342 QLTGGFGFESHDIGDLLKWSSRTWLLGPLVGTALSLPIFDGGARSAGVKQARAAYEENVA 401 Query: 241 TYRGTVLNAFREVEDNLANLRILDDQNRAQDEAVAASSRAAKLSHTQYREGAVSYFSVID 300 YR VL AFREVEDNL++LR+L DQ++ QD+AV AS+RAA+LS T+Y G+V+Y VID Sbjct: 402 NYREAVLVAFREVEDNLSDLRLLADQSKVQDDAVRASTRAAQLSRTRYNAGSVNYLDVID 461 Query: 301 ADR 303 A+R Sbjct: 462 AER 464 >PA2525 [MU] COG1538 Outer membrane protein Pae Pseudomonas aeruginosa Length = 498 Score = 233 bits (593), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 125/299 (41%), Positives = 192/299 (64%), Gaps = 4/299 (1%) Query: 1 VNVSYEVDLFGRVASTVDAATADAQRSEALFHSVLLALQADVAQQYFQVRELDAAAELYR 60 ++VS+EVDL+G++ ++A A S A +V L+ Q+ +AQ Y Q+R +D L Sbjct: 146 LSVSWEVDLWGKLRRQLEANQASLHASAADLAAVRLSQQSQLAQNYLQLRVMDEQIRLLN 205 Query: 61 GTVELRQESLRLVQRRFDEGDISEVDVARARSELASAQSEALGIARQRATAEHALAILLG 120 TV + SL++ + ++ G ++ DVA+AR++L S Q++A+ + QRA EHA+A+L+G Sbjct: 206 DTVTAYERSLKVAENKYRAGIVTRADVAQARTQLKSTQAQAIDLKYQRAQLEHAIAVLVG 265 Query: 121 RTPAEFSLPPQPLTRLSVSVPAGLPSTLLERRPDIAAAERAMAAANARVGVAKSAFFPAL 180 PA+F+LPP +PA +PS LLERRPDIA+AER + +ANA++GVAK+A+FP L Sbjct: 266 LPPAQFNLPPVASVPKLPDLPAVVPSQLLERRPDIASAERKVISANAQIGVAKAAYFPDL 325 Query: 181 NLTGGLGYESAQLGDLFNWSSRTFLLGPLVGTALSMPLFDGGRRQAGVDRARASYEEQVA 240 L+ GY S L + + +R + +GP +M LFDGG + VD+A A+Y++ VA Sbjct: 326 TLSAAGGYRSGSLSNWISTPNRFWSIGP----QFAMTLFDGGLIGSQVDQAEATYDQTVA 381 Query: 241 TYRGTVLNAFREVEDNLANLRILDDQNRAQDEAVAASSRAAKLSHTQYREGAVSYFSVI 299 TYR TVL+ FREVED L L +LD+++ Q EA+ ++ A +L+ QY+ G V Y V+ Sbjct: 382 TYRQTVLDGFREVEDYLVQLSVLDEESGVQREALESAREALRLAENQYKAGTVDYTDVV 440 >RSp1200 [MU] COG1538 Outer membrane protein Rso Ralstonia solanacearum Length = 508 Score = 209 bits (532), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 128/307 (41%), Positives = 182/307 (59%), Gaps = 11/307 (3%) Query: 1 VNVSYEVDLFGRVASTVDAATADAQRSEALFHSVLLALQADVAQQYFQVRELDAAAELYR 60 ++ S+E+DL+GR+ TV++ A A+ S S LL+ QA +AQ YFQ+R D + R Sbjct: 152 LDASWELDLWGRIRRTVESNKASAEASAGDLASALLSAQATLAQDYFQLRVTDTQKAVLR 211 Query: 61 GTVELRQESLRLVQRRFDEGDISEVDVARARSELASAQSEALGIARQRATAEHALAILLG 120 TV + L+L Q ++ G DV A+++L Q+ L RA EHA+A+L+G Sbjct: 212 RTVADYERFLQLTQNQYAVGVAQRSDVLTAQTQLKQTQALLLDAEVTRAQLEHAIAVLIG 271 Query: 121 RTPAEFSLPP------QPLTRLSVSVPAGLPSTLLERRPDIAAAERAMAAANARVGVAKS 174 ++P+ FSL P Q L L +P +PST+LERRPDIAAAER +A ANA +GVAK+ Sbjct: 272 KSPSAFSLAPVSAATAQELPPLP-DIPLEIPSTVLERRPDIAAAERRVAQANANIGVAKA 330 Query: 175 AFFPALNLTGGLGYESAQLGDLFNWSSRTFLLGPLVGTALSMPLFDGGRRQAGVDRARAS 234 A+FP L L G + L L SR + +GP L+ LF+GG A V++A A+ Sbjct: 331 AYFPTLTLGASAGLSANTLSRLATLPSRIWSIGP----TLAATLFEGGALNAAVNKAGAA 386 Query: 235 YEEQVATYRGTVLNAFREVEDNLANLRILDDQNRAQDEAVAASSRAAKLSHTQYREGAVS 294 Y+ V TYR TVL AF++VEDNLA LR + Q++AV ++ AA+L +YR G +S Sbjct: 387 YDAAVGTYRQTVLGAFQDVEDNLAALRWQAQEFDVQNDAVQSAQEAAQLDLNRYRAGTIS 446 Query: 295 YFSVIDA 301 + VI A Sbjct: 447 FLEVITA 453 >PA2837 [MU] COG1538 Outer membrane protein Pae Pseudomonas aeruginosa Length = 479 Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 110/306 (35%), Positives = 174/306 (56%), Gaps = 9/306 (2%) Query: 2 NVSYEVDLFGRVASTVDAATADAQRSEALFHSVLLALQADVAQQYFQVRELDAAAELYRG 61 + S+E+D +GRV ++AA A + SE V +++ A+ A+ Y Q+R A + R Sbjct: 139 DASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAARDYIQLRGEQNRAAIIRD 198 Query: 62 TVELRQESLRLVQRRFDEGDISEVDVARARSELASAQSEALGIARQRATAEHALAILLGR 121 +E + SL L + R G ++++VA+A +++AS ++ + + +A +AL L+G Sbjct: 199 NLETARRSLELTRTRLANGVATDLEVAQALAQVASMEARLPEVEKNQAHLVNALGYLVGA 258 Query: 122 TP----AEFSLPPQPLTRLSVSVPAGLPSTLLERRPDIAAAERAMAAANARVGVAKSAFF 177 +P AE P + + R SVP GLPS L +RRPDI AE + AA A +GVAK+ F+ Sbjct: 259 SPGSLLAELG-PARAIPRPPGSVPVGLPSELAQRRPDIRRAEARLHAATASIGVAKADFY 317 Query: 178 PALNLTGGLGYESAQLGDLFNWSSRTFLLGPLVGTALSMPLFDGGRRQAGVDRARASYEE 237 P + L G G+ES QL L +W R F +GP A S+P+F+GGR + ++ A +E Sbjct: 318 PRITLNGNFGFESLQLSSLGDWDHRQFAIGP----AFSLPIFEGGRLRGRLELREAQQQE 373 Query: 238 QVATYRGTVLNAFREVEDNLANLRILDDQNRAQDEAVAASSRAAKLSHTQYREGAVSYFS 297 Y+ TVL A++EV+D + + + EAVA + RA + + QYR GAV + S Sbjct: 374 AAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRALQSAREQYRAGAVDFLS 433 Query: 298 VIDADR 303 V+D+ R Sbjct: 434 VLDSQR 439 >RSp1599 [MU] COG1538 Outer membrane protein Rso Ralstonia solanacearum Length = 483 Score = 167 bits (423), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 115/303 (37%), Positives = 175/303 (57%), Gaps = 4/303 (1%) Query: 2 NVSYEVDLFGRVASTVDAATADAQRSEALFHSVLLALQADVAQQYFQVRELDAAAELYRG 61 +VSYE DLFGRV + A A +++ A +V L L A VA ++ +RE DA ++ + Sbjct: 144 DVSYEADLFGRVRGNIANAAASEEQAAANLENVRLLLAAQVATTWYSLRETDAEIDVVQQ 203 Query: 62 TVELRQESLRLVQRRFDEGDISEVDVARARSELASAQSEALGIARQRATAEHALAILLGR 121 + L++++L V R +G S +D+A+ ++ + S ++A + +QR EHALA L+G Sbjct: 204 GLALQRKALDFVASRHQDGVASGLDLAQQQALVDSTATQAELLQKQRTQYEHALATLIGT 263 Query: 122 TPAEFSLPPQPLTRLSVSVPAGLPSTLLERRPDIAAAERAMAAANARVGVAKSAFFPALN 181 F + P PL +P LPS ++ERRPD+AAAER AAANA VGVA++AFFP++ Sbjct: 264 PAPAFHIAPAPLAGQPPVIPVALPSDVIERRPDVAAAERGAAAANASVGVARAAFFPSIM 323 Query: 182 LTGGLGYESAQLGDLFNWSSRTFLLGPLVGTALSMPLFDGGRRQAGVDRARASYEEQVAT 241 L GG G+ES L LF+ S + GT ++ +FD GR +A VD A A Y+ +A Sbjct: 324 LNGGAGWESRDLALLFSAPSLLWSF----GTQIAQTVFDAGRTRARVDFANAGYQGAIAN 379 Query: 242 YRGTVLNAFREVEDNLANLRILDDQNRAQDEAVAASSRAAKLSHTQYREGAVSYFSVIDA 301 YR VL A +EVED L+ L+ LD +V ++ + ++ +Y G + VI A Sbjct: 380 YRQAVLGALQEVEDGLSGLQALDRAAAQARASVESARKVYDIASARYEGGLATSLDVIAA 439 Query: 302 DRA 304 ++ Sbjct: 440 QQS 442