BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0153.p         (56 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGpT15 [TK] COG0745 Response regulators consisting of a CheY-lik...    66   2e-11

>AGpT15 [TK] COG0745 Response regulators consisting of a CheY-like receiver
           domain and a winged-helix DNA-binding domain Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 253

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 37/48 (77%)

Query: 9   DEVYDRAIDVQILRLRRKLEADPKHPTLLRTERGAGYLLDTEIEVIWS 56
           +EVYDR+IDV ILRLRRKLE DP  P L++T RGAGY  D +++V + 
Sbjct: 201 EEVYDRSIDVLILRLRRKLEGDPTTPQLIKTARGAGYFFDADVDVSYG 248