BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0099.p (278 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value TM0593 [ET] COG0834 ABC-type amino acid transport/signal transdu... 75 2e-13 AF0231 [ET] COG0834 ABC-type amino acid transport/signal transdu... 72 1e-12 BS_glnH [ET] COG0834 ABC-type amino acid transport/signal transd... 70 7e-12 AGl669 [ET] COG0834 ABC-type amino acid transport/signal transdu... 69 1e-11 SMa0495 [ET] COG0834 ABC-type amino acid transport/signal transd... 69 1e-11 >TM0593 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Tma Thermotoga maritima Length = 246 Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 9/189 (4%) Query: 65 GFCADFGRDLARYLKAEVEWVETTWGNAVLDVQTNKIDAQLA-MAPTPQRREVVDFSNPL 123 GF D +++AR L E++ V+ T+ + + T KID ++ M T +R++VV FS+P Sbjct: 52 GFDVDLAKEIARRLGVELKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAFSDPY 111 Query: 124 YNNINTVVARKGLEF--KAWEDLNKPEIKVAVDVGSSHDQLVTRILPKATILRFETSAAA 181 ++ +V RK +F K +EDL VAV +G++ D V++ ++RF+ A Sbjct: 112 FDAGQVIVVRKDSDFRPKTYEDLVGK--TVAVQIGTTGDIEVSK-YDGIKVVRFDKFTDA 168 Query: 182 TMALQSGRADCQVLVVLLSTSLLVKLPNIGHIVFPTPDETAPTNIGIRKQADQSFVTAVN 241 + L+ GRAD VL + + + K P++ ++ + I +RK+ D + +N Sbjct: 169 FLELKRGRADAVVLDSATARAFVAKNPDL--VISSGVLSSEQYGIAVRKE-DTDLLEFIN 225 Query: 242 GWLEESRKA 250 L E +K+ Sbjct: 226 SVLRELKKS 234 >AF0231 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Afu Archaeoglobus fulgidus Length = 264 Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 11/237 (4%) Query: 27 QDIESTMARVKRTGKLRLGAINGAIPYFNKDLVTQEWKGFCADFGRDLARYLKAEVEWVE 86 Q E ++ G L +G+ P+ D T E+ GF D +++A+ + E ++V Sbjct: 25 QKEEKAQIKLVEPGYLTVGSDIAYPPFEFTDEKTGEYAGFDIDLMKEIAKRMGLEAKFVN 84 Query: 87 TTWGNAVLDVQTNKIDAQL-AMAPTPQRREVVDFSNPLYNNINTVVARKG-LEFKAWEDL 144 T W + + +K D AM T +R + VDFS+P + ++ R + + EDL Sbjct: 85 TAWDGIIPGLLAHKYDVICSAMTITEERAKQVDFSDPYFEAKQVIITRADETDIQDVEDL 144 Query: 145 NKPEIKVAVDVGSSHDQLVTRILPKA----TILRFETSAAATMALQSGRADCQVLVVLLS 200 N VAV G++ D R+ + I RFE + A MA+Q G AD ++ ++ Sbjct: 145 NGK--VVAVQQGTTGDFAAQRLKDEKGIQLEIKRFEGTPEALMAVQKGDADAAIIDNFVA 202 Query: 201 TSLLVKLPNIGHIVFPTPDETAPTNIGIRKQADQ-SFVTAVNGWLEESRKAGRIREI 256 + P + IV DE AP GI D + + +N L+E ++ G +I Sbjct: 203 YIAAKENPGLYRIV--ESDEFAPEYYGIAVNKDNPALLEKINEVLKEIKEDGTYDKI 257 >BS_glnH [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Bsu Bacillus subtilis Length = 273 Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 8/229 (3%) Query: 32 TMARVKRTGKLRLGAINGAIPYFNKDLVTQEWKGFCADFGRDLARYL---KAEVEWVETT 88 T+A +K K+ G + K+ + E +GF D + +A+ + + + ++ E T Sbjct: 38 TLAAIKDNDKIVFGVKTDTRLFGLKNPSSGEIEGFDIDIAKQIAKDILGDEKKAQFKEVT 97 Query: 89 WGNAVLDVQTNKIDAQLA-MAPTPQRREVVDFSNPLYNNINTVVARKGLEFKAWEDLNKP 147 + +Q IDA +A M T +R++ VDFS+ + +++ +KG + K+ E+L K Sbjct: 98 SKTRIPMLQNGDIDAIVATMTITEERKKEVDFSDVYFEAGQSLLVKKGSKIKSVENLGKG 157 Query: 148 EIKVAVDVGSSHDQLVTRILPKATILRFETSAAATMALQSGRADCQVLVVLLSTSLLVKL 207 +AV GS+ Q + P+A++L FE A A AL+SG+ D + + + Sbjct: 158 SKVLAVK-GSTSSQNIREKAPEASVLEFENYAEAFTALKSGQGDALTTDNAILYGMADEN 216 Query: 208 PNIGHIVFPTPDETAPTNIGIRKQADQSFVTAVNGWLEESRKAGRIREI 256 N P DE P I ++K + +N L++ + GR EI Sbjct: 217 KNYQLTGKPFTDE--PYGIAVKK-GQSALAKEINASLKKMKSDGRYDEI 262 >AGl669 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 278 Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 14/248 (5%) Query: 32 TMARVKRTGKLRLGAINGAIPY-FNKDLVTQEWKGFCADFGRDLARYLKAEVEWVETTWG 90 T+ K +GK+ +G P+ F QE G+ AD R A YL +VE+V Sbjct: 34 TLEEAKSSGKIVIGIQGDNAPWGFINSSGVQE--GYDADLARGFADYLGLKVEFVPLAVA 91 Query: 91 NAVLDVQTNKIDAQLA-MAPTPQRREVVDFSNPLYNNINTVVARKGLEFKAWEDLNKPEI 149 N + ++T K+DA A M TP+R + V ++ P +N+ +V A K + ++DL + Sbjct: 92 NRIPSLRTGKVDALFASMGMTPERAKNVQYAQPYAHNVMSVYATKDKKIANFDDLTG--M 149 Query: 150 KVAVDVGSSHDQLVTR-ILPKATILRFETSAAATMALQSGRADCQVLVVLLSTSLLVKLP 208 V S D +T KA ILRF+ AA A+ SG+ + L Sbjct: 150 TVGAPKSSPMDTALTAGAGTKANILRFDDDAATIQAILSGQIEAIGGNQFYGDRLAAAGG 209 Query: 209 NIGHIVFPTPDETAPTNIGIRKQADQSFVTAVNGWLEESRKAGRIREIIVANMQNLAKVP 268 + F D N + ++ + A+N WL++++ G + ++ M K P Sbjct: 210 KDYEVKF---DLVTLYNSAATRPGEKDWNEALNAWLDKAKANGDLAKVYAKWM----KRP 262 Query: 269 PTAFPPQL 276 FP L Sbjct: 263 VPDFPASL 270 >SMa0495 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Sme Sinorhizobium meliloti Length = 272 Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/206 (23%), Positives = 98/206 (47%), Gaps = 14/206 (6%) Query: 42 LRLGAINGAIPYFNKDLVTQEWKGFCADFGRDLARYLKAEVEWVETTWGNAVLDVQTNKI 101 LR+G P FN + +G+ D + ++ + + E+V W + + NK Sbjct: 30 LRVGMECTYAP-FNYRTSDGKLEGYDVDVAKGISEIIGVDFEYVCQEWDGMIPALLANKF 88 Query: 102 DAQLA-MAPTPQRREVVDFSNPLYNNINTVVARKGLEFKAWEDLNKP------EIKVAVD 154 D +A M+ T +R+E +DFS+P N++ +V G + K ++D +P +++ V+ Sbjct: 89 DLIIASMSITDKRKEQIDFSSPYRNSVGRIVGPVGKDLKLFDDKGQPVVGNFDGLRIGVE 148 Query: 155 VGSSHDQLVTRILPKATILRFETSAAATMALQSGRADCQVLVVLLSTSLLVKLPNIGHIV 214 S++ + + LPKA ++ ++++ A + L++GR D + + + + G Sbjct: 149 RASTYFEWFSAKLPKADLVLYDSNEAMYLDLKNGRVDVIMTNPMKAHLSFLSGEGKGKYE 208 Query: 215 FPTPDETAP------TNIGIRKQADQ 234 F P+ P +G+RK D+ Sbjct: 209 FIGPEVNEPKFFGPGVGVGLRKGNDE 234