BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0098.p (219 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value alr3187_2 [E] COG0765 ABC-type amino acid transport system, perm... 157 1e-38 sll1270_2 [E] COG0765 ABC-type amino acid transport system, perm... 156 4e-38 CAC0111_2 [E] COG0765 ABC-type amino acid transport system, perm... 148 9e-36 glnP [E] COG0765 ABC-type amino acid transport system, permease ... 145 1e-34 ZglnP [E] COG0765 ABC-type amino acid transport system, permease... 145 1e-34 >alr3187_2 [E] COG0765 ABC-type amino acid transport system, permease component Nos Nostoc sp. PCC 7120 Length = 240 Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 84/217 (38%), Positives = 126/217 (58%), Gaps = 5/217 (2%) Query: 3 SWDFGMLWQYRGIIVSGVITTVLFTAVVVITGLLVGVLVGLGRVSSNRTLCGVLRGYVEV 62 S ++ Q+ ++ G + T+ T + + GL+ G L+ L R+S R YV+ Sbjct: 9 SGSINLILQFLPTLLQGALVTIQLTILSTVLGLICGTLIALTRLSQFTPARLFARAYVDF 68 Query: 63 FRCTPVLVQLIWFYYALPVL-----LGIELSPWMAAALALTLYGGAFYSEIVRGGIVSID 117 FR TP+LVQ+ Y+ +P L W+A +AL++ A+ +EIVR GI SI+ Sbjct: 69 FRGTPLLVQIFMIYFGIPALAQQLGFTFNFDRWVAGVIALSVNAAAYIAEIVRAGIQSIE 128 Query: 118 AGQTEAGQAIGMTRWQVMRRLILPQAFRRMTPPLVSQSIMQLKNTSLLSVLAVPDLVYQG 177 GQTEA +++G+ W MR +I PQAFRRM PPL ++ I LK+TSL++V+ +L +G Sbjct: 129 TGQTEAAKSLGLNPWLTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKG 188 Query: 178 QLIAHDTYRPLEIYTLVAVLYFIILFPATVVAKRLEL 214 QLI D YR EIY VA++Y + A+ V RLE+ Sbjct: 189 QLIVADNYRAFEIYAAVAIVYLCLTLLASQVLSRLEM 225 >sll1270_2 [E] COG0765 ABC-type amino acid transport system, permease component Syn Synechocystis Length = 255 Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 90/203 (44%), Positives = 127/203 (62%), Gaps = 5/203 (2%) Query: 16 IVSGVITTVLFTAVVVITGLLVGVLVGLGRVSSNRTLCGVLRGYVEVFRCTPVLVQLIWF 75 + G I TVL TA V GL+ G V + +S + L + R YVE FR TP+LVQL Sbjct: 35 LFKGSILTVLLTAFSVFFGLIGGTGVAIALISDIKPLQLIFRIYVEFFRGTPMLVQLFII 94 Query: 76 YYALPVL-----LGIELSPWMAAALALTLYGGAFYSEIVRGGIVSIDAGQTEAGQAIGMT 130 Y+ LP L LGI + + AA +AL+L A+ +EI+RGGI SID GQ EA +++GM+ Sbjct: 95 YFGLPALFKEIGLGITIDRFPAAIIALSLNVAAYLAEIIRGGIQSIDQGQWEACESLGMS 154 Query: 131 RWQVMRRLILPQAFRRMTPPLVSQSIMQLKNTSLLSVLAVPDLVYQGQLIAHDTYRPLEI 190 WQ M+ +I PQAFRR+ PPL ++ I +K+TSL +V+ +L +GQLI TYR E+ Sbjct: 155 PWQTMKEVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELFREGQLIVATTYRAFEV 214 Query: 191 YTLVAVLYFIILFPATVVAKRLE 213 Y VA++Y ++ ++ V K LE Sbjct: 215 YIAVALVYLLLTTISSFVFKWLE 237 >CAC0111_2 [E] COG0765 ABC-type amino acid transport system, permease component Cac Clostridium acetobutylicum Length = 214 Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 137/207 (66%) Query: 7 GMLWQYRGIIVSGVITTVLFTAVVVITGLLVGVLVGLGRVSSNRTLCGVLRGYVEVFRCT 66 ++ QY ++ G+ T+ T + +I L +G + G +S+++ L + R +V++ R T Sbjct: 3 NLVKQYAPQLLKGLGMTLFITVIAMIIALFIGAIFGFFSISTSKVLNTLARWFVDIIRGT 62 Query: 67 PVLVQLIWFYYALPVLLGIELSPWMAAALALTLYGGAFYSEIVRGGIVSIDAGQTEAGQA 126 P+LVQ + ++ +P L G++++P +A +A++L GA+ SEI RGGI+SI+ GQ EA ++ Sbjct: 63 PLLVQAFFIFFGIPGLSGLKINPVVAGIIAVSLNAGAYMSEIFRGGILSINQGQMEAARS 122 Query: 127 IGMTRWQVMRRLILPQAFRRMTPPLVSQSIMQLKNTSLLSVLAVPDLVYQGQLIAHDTYR 186 +G+ M +++ PQA + M P +V+Q I+ LK+TS+LSV+ + +L GQ+I T++ Sbjct: 123 LGIPYRTAMLKIVFPQAVKVMIPSIVNQFIISLKDTSILSVIGIQELTNTGQIIIGATFK 182 Query: 187 PLEIYTLVAVLYFIILFPATVVAKRLE 213 +I+ +VA++YFI++ +++++++E Sbjct: 183 AFQIWLIVAIMYFIVIKLLSILSRKIE 209 >glnP [E] COG0765 ABC-type amino acid transport system, permease component Eco Escherichia coli K12 Length = 219 Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 127/210 (60%), Gaps = 1/210 (0%) Query: 5 DFGMLWQYRGIIVSGVITTVLFTAVVVITGLLVGVLVGLGRVSSNRTLCGVLRGYVEVFR 64 D+ +W +++ G T+ + + + GL++G+L G R V ++EV R Sbjct: 4 DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIR 63 Query: 65 CTPVLVQLIWFYYALPVLLG-IELSPWMAAALALTLYGGAFYSEIVRGGIVSIDAGQTEA 123 TP++VQ+++ Y+ALP+ + + P+ AA + + + GA+ +EI RG ++SI G EA Sbjct: 64 GTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREA 123 Query: 124 GQAIGMTRWQVMRRLILPQAFRRMTPPLVSQSIMQLKNTSLLSVLAVPDLVYQGQLIAHD 183 G A+G++RW+ +R +ILP A RRM PPL +Q I+ +K+TSL V+ V +L QGQ I Sbjct: 124 GLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAG 183 Query: 184 TYRPLEIYTLVAVLYFIILFPATVVAKRLE 213 +R LEI++ VAV Y II + + +RLE Sbjct: 184 NFRALEIWSAVAVFYLIITLVLSFILRRLE 213 >ZglnP [E] COG0765 ABC-type amino acid transport system, permease component EcZ Escherichia coli O157:H7 EDL933 Length = 219 Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 127/210 (60%), Gaps = 1/210 (0%) Query: 5 DFGMLWQYRGIIVSGVITTVLFTAVVVITGLLVGVLVGLGRVSSNRTLCGVLRGYVEVFR 64 D+ +W +++ G T+ + + + GL++G+L G R V ++EV R Sbjct: 4 DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIR 63 Query: 65 CTPVLVQLIWFYYALPVLLG-IELSPWMAAALALTLYGGAFYSEIVRGGIVSIDAGQTEA 123 TP++VQ+++ Y+ALP+ + + P+ AA + + + GA+ +EI RG ++SI G EA Sbjct: 64 GTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREA 123 Query: 124 GQAIGMTRWQVMRRLILPQAFRRMTPPLVSQSIMQLKNTSLLSVLAVPDLVYQGQLIAHD 183 G A+G++RW+ +R +ILP A RRM PPL +Q I+ +K+TSL V+ V +L QGQ I Sbjct: 124 GLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAG 183 Query: 184 TYRPLEIYTLVAVLYFIILFPATVVAKRLE 213 +R LEI++ VAV Y II + + +RLE Sbjct: 184 NFRALEIWSAVAVFYLIITLVLSFILRRLE 213