BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0059.p         (85 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1114 [C] COG1146 Ferredoxin Rso Ralstonia solanacearum             147   8e-36
XF2601 [C] COG1146 Ferredoxin Xfa Xylella fastidiosa 9a5c             120   7e-28
PA3621 [C] COG1146 Ferredoxin Pae Pseudomonas aeruginosa              110   1e-24
RSp0807 [C] COG1146 Ferredoxin Rso Ralstonia solanacearum             103   1e-22
PA2715 [C] COG1146 Ferredoxin Pae Pseudomonas aeruginosa               89   2e-18

>RSc1114 [C] COG1146 Ferredoxin Rso Ralstonia solanacearum
          Length = 108

 Score =  147 bits (370), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 71/86 (82%), Positives = 81/86 (94%), Gaps = 1/86 (1%)

Query: 1   VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNADLSRS-WPS 59
           VDCFREGPNFL IDPDECIDCAVCVAECPVNAIYAEEDVPADQQ++IA+NA+L+++ WPS
Sbjct: 23  VDCFREGPNFLTIDPDECIDCAVCVAECPVNAIYAEEDVPADQQKWIAINAELAQAGWPS 82

Query: 60  ITKTKAPLPEAEEWKDKTDKLQYLQR 85
           ITKTK+PLP+AEEWKD  DK QYL+R
Sbjct: 83  ITKTKSPLPDAEEWKDVKDKEQYLER 108


>XF2601 [C] COG1146 Ferredoxin Xfa Xylella fastidiosa 9a5c
          Length = 107

 Score =  120 bits (301), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 66/85 (77%)

Query: 1   VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNADLSRSWPSI 60
           VDCF EGPNFL IDPDECIDC +C  ECP NAIY EEDVP +Q+Q IALNA+L+++WP +
Sbjct: 23  VDCFHEGPNFLVIDPDECIDCTLCEPECPANAIYPEEDVPTEQKQCIALNAELAKAWPVV 82

Query: 61  TKTKAPLPEAEEWKDKTDKLQYLQR 85
           T  + P+P+A EW  K DKL  LQR
Sbjct: 83  TVRREPMPDAAEWDGKPDKLALLQR 107


>PA3621 [C] COG1146 Ferredoxin Pae Pseudomonas aeruginosa
          Length = 107

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/85 (57%), Positives = 65/85 (76%)

Query: 1   VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNADLSRSWPSI 60
           VDCF EGPNFL I PDECIDCA+C  ECP  AI++E++VP + Q++I LN++L+  WP+I
Sbjct: 23  VDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPENMQEFIELNSELAEVWPNI 82

Query: 61  TKTKAPLPEAEEWKDKTDKLQYLQR 85
           T+ K  LP+AEEW     KLQ+L+R
Sbjct: 83  TEKKDALPDAEEWDGVAGKLQHLER 107


>RSp0807 [C] COG1146 Ferredoxin Rso Ralstonia solanacearum
          Length = 112

 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 5/85 (5%)

Query: 1   VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNADLSRS--WP 58
           +DCF  GPNFL IDPD CIDC++C  ECPV AI+AE DVPADQ+++IALNA LSR   WP
Sbjct: 23  MDCFHAGPNFLVIDPDTCIDCSICAPECPVGAIHAEADVPADQREFIALNAQLSRRADWP 82

Query: 59  SITKTKAPLPEAEEW---KDKTDKL 80
            +T+ + PL +   W   KDK D L
Sbjct: 83  RLTQVQPPLADHARWAQVKDKRDAL 107


>PA2715 [C] COG1146 Ferredoxin Pae Pseudomonas aeruginosa
          Length = 112

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 2/87 (2%)

Query: 1   VDCFREGPNFLAIDPDECIDCAVCVAECPVNAIYAEEDVPADQQQYIALNADLSR--SWP 58
           VDCF EGPNFL I PDECIDCA+C  ECPV AI AE++VP  Q+Q+IALN +L+   +W 
Sbjct: 23  VDCFYEGPNFLVIHPDECIDCALCEPECPVAAIRAEDEVPLGQRQFIALNGELAAHPNWT 82

Query: 59  SITKTKAPLPEAEEWKDKTDKLQYLQR 85
            IT+ K    + + W     KL  L R
Sbjct: 83  QITRKKPAPDDHDAWFGLPGKLAELDR 109