BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0031.p         (122 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans...    90   1e-18
PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp...    84   1e-16
AGpT164 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans...    82   4e-16
AGl1398 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans...    75   3e-14
ssuC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transpor...    72   4e-13

>YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport
           system, permease component Ype Yersinia pestis
          Length = 265

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 59/74 (79%)

Query: 37  WLLPVLLLVWWEIAAQAGWLSSRILPEPFAVLKAAWNLSASGELWRHLAVSSGRAASGFA 96
           W+LPV L+V W++A +AGWLS+RILP P AV+ A W L+ SGELW+HL +SS RA  GF+
Sbjct: 16  WILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRALIGFS 75

Query: 97  VGAGLGLILGLLSG 110
           +G  +GL+LG+++G
Sbjct: 76  IGGSIGLVLGVITG 89


>PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport
           system, permease component Pae Pseudomonas aeruginosa
          Length = 262

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 55/74 (74%)

Query: 37  WLLPVLLLVWWEIAAQAGWLSSRILPEPFAVLKAAWNLSASGELWRHLAVSSGRAASGFA 96
           W LP++LL  W+ A + GWLSSRILP P AVL+A W L  SGE+W+HLA+S  RAA GF 
Sbjct: 14  WALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRAAIGFL 73

Query: 97  VGAGLGLILGLLSG 110
           +G  +GL+LG ++G
Sbjct: 74  IGGAIGLVLGFVTG 87


>AGpT164 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport
           system, permease component Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 266

 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 61/96 (63%)

Query: 21  KAAAKAARKPRGAWVGWLLPVLLLVWWEIAAQAGWLSSRILPEPFAVLKAAWNLSASGEL 80
           K    A R    A+  W  PV++++ W+IA+  G LS  ILP P AVL+AAW+L+ASGEL
Sbjct: 7   KTPTTAGRYLAQAFAPWAFPVIVVILWQIASSGGLLSQGILPSPLAVLEAAWSLAASGEL 66

Query: 81  WRHLAVSSGRAASGFAVGAGLGLILGLLSGSLRSAN 116
            +H+A S  RAA GF +G+ LGL  G ++G  R+  
Sbjct: 67  VQHMAASFWRAAVGFGIGSALGLFFGFVNGLWRTGE 102


>AGl1398 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport
           system, permease component Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 260

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 53/79 (67%)

Query: 32  GAWVGWLLPVLLLVWWEIAAQAGWLSSRILPEPFAVLKAAWNLSASGELWRHLAVSSGRA 91
           G   GWLLP L+L  WE+AA+ G +S+ +LP P AV +A W L  SGEL  ++ VSS RA
Sbjct: 11  GVATGWLLPALILAGWEVAARVGLISANVLPAPSAVAEAFWRLLLSGELIANIGVSSARA 70

Query: 92  ASGFAVGAGLGLILGLLSG 110
            +GFA+G  +G I GL +G
Sbjct: 71  LAGFAIGGSIGFIFGLANG 89


>ssuC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport
          system, permease component Eco Escherichia coli K12
          Length = 278

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/59 (59%), Positives = 44/59 (74%)

Query: 37 WLLPVLLLVWWEIAAQAGWLSSRILPEPFAVLKAAWNLSASGELWRHLAVSSGRAASGF 95
          W LPV ++  W++A+  GWLS+RILP P  V+ A W LSASGELW+HLA+SS RA  GF
Sbjct: 30 WFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGF 88