BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0079.p (192 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1117 [M] COG4591 ABC-type transport system, involved in lipop... 256 1e-68 PA2986 [M] COG4591 ABC-type transport system, involved in lipopr... 174 7e-44 NMA1403 [M] COG4591 ABC-type transport system, involved in lipop... 170 1e-42 NMB1235 [M] COG4591 ABC-type transport system, involved in lipop... 169 3e-42 XF1076 [M] COG4591 ABC-type transport system, involved in lipopr... 164 1e-40 >RSc1117 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Rso Ralstonia solanacearum Length = 416 Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 124/180 (68%), Positives = 145/180 (80%), Gaps = 1/180 (0%) Query: 6 NLPFEWLVGIRYTRAGKRSGRNSFISFISLISMAGIALGVAALIVVLSVMNGFQKEVRDR 65 P+EW +G RYTRA KR+ RNSFISFISLISM GIALGVAALIVVLSVMNGFQKEVRDR Sbjct: 2 KFPYEWQIGWRYTRASKRASRNSFISFISLISMLGIALGVAALIVVLSVMNGFQKEVRDR 61 Query: 66 MLSVLAHIEVFDASGSMKDWQAVAKQTFQNPEVLGAAPYVSGQAMMTRDDNLRGVLVRGV 125 MLSVL+HIE+ A GS+ DWQ A + QN EV+GAAPYV QAM+TRDD +RGVL+RGV Sbjct: 62 MLSVLSHIEIM-APGSLPDWQRTANEAMQNKEVVGAAPYVGAQAMITRDDAVRGVLLRGV 120 Query: 126 LPEEEPKVSDVAKQVKQGSFDSLKPGEFNIVIGGELARGMRVGLGDKVTVIVPQGQVTPA 185 P +EPKVSD+AK K G+ D L+PGEF I +G E+ARG+ V GDKVT++ PQG +TPA Sbjct: 121 SPADEPKVSDIAKDFKSGTIDDLRPGEFGIALGAEMARGLGVRQGDKVTLVAPQGTITPA 180 >PA2986 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Pae Pseudomonas aeruginosa Length = 433 Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 89/177 (50%), Positives = 120/177 (67%), Gaps = 4/177 (2%) Query: 8 PFEWLVGIRYTRAGKRSGRNSFISFISLISMAGIALGVAALIVVLSVMNGFQKEVRDRML 67 P + +G+RYTRA +R N +ISFISL SM G+ALGV A+I+VLSVMNGFQKE+R R+L Sbjct: 23 PLPFFIGLRYTRAKRR---NHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 79 Query: 68 SVLAHIEVFDASGSMKDWQAVAKQTFQNPEVLGAAPYVSGQAMMTRDDNLRGVLVRGVLP 127 ++ H + A+ + DWQ VA ++ EV+GAAP+ Q M++ N+ VLV G+ P Sbjct: 80 GMVPHATI-SAAQPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDP 138 Query: 128 EEEPKVSDVAKQVKQGSFDSLKPGEFNIVIGGELARGMRVGLGDKVTVIVPQGQVTP 184 +EE KVS V + + QGS D LKPGEF IV+G AR V +GDK+T+IVP+ P Sbjct: 139 QEERKVSIVGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAP 195 >NMA1403 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component NmA Neisseria meningitidis Z2491 Length = 415 Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 87/177 (49%), Positives = 121/177 (68%), Gaps = 3/177 (1%) Query: 9 FEWLVGIRYTRAGKRSGRNSFISFISLISMAGIALGVAALIVVLSVMNGFQKEVRDRMLS 68 E +G+RY RA KR+G F+SFI+++S+AGIALGV ALIVVLSVMNGFQKE+R ++L+ Sbjct: 4 LEAWIGLRYLRAKKRNG---FMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLLN 60 Query: 69 VLAHIEVFDASGSMKDWQAVAKQTFQNPEVLGAAPYVSGQAMMTRDDNLRGVLVRGVLPE 128 V H E+ + DW+ + + T +L AAPYVS QA++ +RGV +RG+LP Sbjct: 61 VAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQIRGILPS 120 Query: 129 EEPKVSDVAKQVKQGSFDSLKPGEFNIVIGGELARGMRVGLGDKVTVIVPQGQVTPA 185 EE KV + ++ G F+ L PGEF+I++G LA + +G+KVTVI P+G VTPA Sbjct: 121 EERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPA 177 >NMB1235 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Nme Neisseria meningitidis MC58 Length = 415 Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 87/177 (49%), Positives = 121/177 (68%), Gaps = 3/177 (1%) Query: 9 FEWLVGIRYTRAGKRSGRNSFISFISLISMAGIALGVAALIVVLSVMNGFQKEVRDRMLS 68 E +G+RY RA KR+G F+SFI+++S+AGIALGV ALIVVLSVMNGFQKE+R ++L+ Sbjct: 4 LEAWIGLRYLRAKKRNG---FMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLLN 60 Query: 69 VLAHIEVFDASGSMKDWQAVAKQTFQNPEVLGAAPYVSGQAMMTRDDNLRGVLVRGVLPE 128 V H E+ + DW+ + + T +L AAPYVS QA++ +RGV +RG+LP Sbjct: 61 VAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILPS 120 Query: 129 EEPKVSDVAKQVKQGSFDSLKPGEFNIVIGGELARGMRVGLGDKVTVIVPQGQVTPA 185 EE KV + ++ G F+ L PGEF+I++G LA + +G+KVTVI P+G VTPA Sbjct: 121 EERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPA 177 >XF1076 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Xfa Xylella fastidiosa 9a5c Length = 413 Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 83/177 (46%), Positives = 118/177 (66%), Gaps = 4/177 (2%) Query: 8 PFEWLVGIRYTRAGKRSGRNSFISFISLISMAGIALGVAALIVVLSVMNGFQKEVRDRML 67 P +G+RY RA +R+G FISFIS+ S+ GIALGV LI L+VM+GFQKE+RDR+L Sbjct: 4 PLSVAIGLRYLRAKRRNG---FISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60 Query: 68 SVLAHIEVFDASGSMKDWQAVAKQTFQNPEVLGAAPYVSGQAMMTRDDNLRGVLVRGVLP 127 + AH V M DWQ +P V GAAPY+ +A++ + + + ++RG++P Sbjct: 61 QMAAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALL-QGERHQPAMMRGIVP 119 Query: 128 EEEPKVSDVAKQVKQGSFDSLKPGEFNIVIGGELARGMRVGLGDKVTVIVPQGQVTP 184 +E KVS +A+++K GS DSLKPGE+NI++G ELA + V +GD V V++ Q Q TP Sbjct: 120 NQEDKVSVLAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQTQTTP 176