BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0078.p (206 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1117 [M] COG4591 ABC-type transport system, involved in lipop... 296 3e-80 XF1076 [M] COG4591 ABC-type transport system, involved in lipopr... 217 1e-56 PA2988 [M] COG4591 ABC-type transport system, involved in lipopr... 209 3e-54 NMB1235 [M] COG4591 ABC-type transport system, involved in lipop... 197 1e-50 NMA1403 [M] COG4591 ABC-type transport system, involved in lipop... 196 3e-50 >RSc1117 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Rso Ralstonia solanacearum Length = 416 Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 142/206 (68%), Positives = 173/206 (83%) Query: 1 LQDAETLFRMDAPTGVRLRIRDMLQAPEVTQQLARTLSGDLYLRDWSQQNSNWFAAVKTE 60 ++DAE LFR+ PTGVRL++ DM +AP+V + L+RTL+G+LY+RDWS+QN NWFAAV+TE Sbjct: 211 MEDAERLFRLTGPTGVRLKLVDMQRAPQVAEALSRTLTGELYIRDWSRQNKNWFAAVQTE 270 Query: 61 KRMMFIILALIIAVAAFNLVSTLVMTVTDKQADIAILRTLGASPASIMKIFVIQGALVGL 120 K+MMFIIL LIIAVAAFNLVSTLVMTVTDKQADIAILRT+GA P SIMKIF++QG +G Sbjct: 271 KKMMFIILTLIIAVAAFNLVSTLVMTVTDKQADIAILRTMGAQPGSIMKIFIVQGVAIGF 330 Query: 121 VGTAIGVGLGVVVALNIDVLVPAIERAFHVQFLPKSIYVISELPSELIWSDVYTIGGLAV 180 +GT +GV G ++A NIDV+VPAIE F VQFLPK IY ISELPS+ +D+ TIG ++ Sbjct: 331 IGTLLGVLFGTLIAYNIDVIVPAIEHLFGVQFLPKDIYFISELPSDPRVNDIATIGLISF 390 Query: 181 VLAFLATLYPSWAAARVKPAEALRYE 206 VLA +ATLYPSW A+RV PAEALRYE Sbjct: 391 VLASVATLYPSWHASRVNPAEALRYE 416 >XF1076 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Xfa Xylella fastidiosa 9a5c Length = 413 Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 103/206 (50%), Positives = 157/206 (76%) Query: 1 LQDAETLFRMDAPTGVRLRIRDMLQAPEVTQQLARTLSGDLYLRDWSQQNSNWFAAVKTE 60 ++D + + RMD TGVRL++ DM A +V + LA L+G + DW+++N+N ++++K E Sbjct: 208 MEDMQKVMRMDGVTGVRLKLHDMDHAWDVARDLAVRLNGPYLVSDWTRENANLYSSLKME 267 Query: 61 KRMMFIILALIIAVAAFNLVSTLVMTVTDKQADIAILRTLGASPASIMKIFVIQGALVGL 120 K +M I+L+LIIA+ AFNLVS+ VM VTDKQADIAILRTLG SPA +M++F++QG+L+G+ Sbjct: 268 KTVMGILLSLIIAMGAFNLVSSQVMLVTDKQADIAILRTLGLSPAGVMRVFMVQGSLIGI 327 Query: 121 VGTAIGVGLGVVVALNIDVLVPAIERAFHVQFLPKSIYVISELPSELIWSDVYTIGGLAV 180 +GT GV GVV+ N++ ++ IE F++ LP+ +Y I+ LP+++ + DV I +A+ Sbjct: 328 IGTLSGVIGGVVLTWNLERILKLIESTFNITLLPEDVYYITGLPTDMQFPDVVVITLMAL 387 Query: 181 VLAFLATLYPSWAAARVKPAEALRYE 206 V++F+ATLYP+W AAR++PAEALRYE Sbjct: 388 VMSFIATLYPAWRAARIQPAEALRYE 413 >PA2988 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Pae Pseudomonas aeruginosa Length = 416 Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 106/209 (50%), Positives = 151/209 (72%), Gaps = 3/209 (1%) Query: 1 LQDAETL--FRMDAPTGVRLRIRDMLQAPEVTQQLARTLS-GDLYLRDWSQQNSNWFAAV 57 L+DA L ++ + G+RL++ D+ QAP V ++ARTL+ D Y RDW++ + N + A+ Sbjct: 208 LEDAARLQRWKTNQVQGLRLKLDDLFQAPRVAWEIARTLTDNDFYARDWTRSHGNLYQAI 267 Query: 58 KTEKRMMFIILALIIAVAAFNLVSTLVMTVTDKQADIAILRTLGASPASIMKIFVIQGAL 117 + EK M+ ++L LI+AVAAFN++STLVM VTDK++DIAILRTLGA+P IM F++QG + Sbjct: 268 RMEKTMIGLLLLLIVAVAAFNIISTLVMVVTDKKSDIAILRTLGATPGQIMATFMVQGTV 327 Query: 118 VGLVGTAIGVGLGVVVALNIDVLVPAIERAFHVQFLPKSIYVISELPSELIWSDVYTIGG 177 +G++GT +G LGVV ALN+ + A+E+ QFL +Y I LPS+L+ DV + G Sbjct: 328 IGVIGTLVGGVLGVVAALNVSAWISALEKLLGHQFLASDVYFIDYLPSQLMLDDVVLVCG 387 Query: 178 LAVVLAFLATLYPSWAAARVKPAEALRYE 206 A+VL+F ATLYP+W AAR +PAEALRYE Sbjct: 388 AALVLSFFATLYPAWRAARTQPAEALRYE 416 >NMB1235 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Nme Neisseria meningitidis MC58 Length = 415 Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 106/208 (50%), Positives = 141/208 (67%), Gaps = 2/208 (0%) Query: 1 LQDAETLFRMDAP-TGVRLRIRDMLQAPEVTQQLARTLSGD-LYLRDWSQQNSNWFAAVK 58 +QDA L+R+D G+RL++ D AP +T L D +++RDW+ N ++F AV+ Sbjct: 208 IQDARVLYRLDKEVAGLRLKLADPQNAPALTATLIPEAQRDAVWVRDWTYSNRSYFEAVE 267 Query: 59 TEKRMMFIILALIIAVAAFNLVSTLVMTVTDKQADIAILRTLGASPASIMKIFVIQGALV 118 EKRMMFIIL LIIAVAAFNLVS+LVM VT+KQADIAILRTLG SPA +MKIF++QGA Sbjct: 268 LEKRMMFIILTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPAGVMKIFMVQGAFS 327 Query: 119 GLVGTAIGVGLGVVVALNIDVLVPAIERAFHVQFLPKSIYVISELPSELIWSDVYTIGGL 178 G GT GV GV++ N+ +V E V + +Y I LPS++ DV I + Sbjct: 328 GFFGTLAGVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACI 387 Query: 179 AVVLAFLATLYPSWAAARVKPAEALRYE 206 ++ L+F+ATLYPS A++ +PAEALRYE Sbjct: 388 SLGLSFVATLYPSRRASKTQPAEALRYE 415 >NMA1403 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component NmA Neisseria meningitidis Z2491 Length = 415 Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 105/208 (50%), Positives = 141/208 (67%), Gaps = 2/208 (0%) Query: 1 LQDAETLFRMDAP-TGVRLRIRDMLQAPEVTQQLARTLSGD-LYLRDWSQQNSNWFAAVK 58 +QDA L+R+D G+RL++ D AP +T +L D +++RDW+ N ++F AV+ Sbjct: 208 IQDARVLYRLDKEVAGLRLKLADPQNAPALTAKLIPEAQRDTVWVRDWTFSNRSYFEAVE 267 Query: 59 TEKRMMFIILALIIAVAAFNLVSTLVMTVTDKQADIAILRTLGASPASIMKIFVIQGALV 118 EKRMMFIIL LIIAVAAFNLVS+LVM VT+KQADIAILRTLG SP +MKIF++QGA Sbjct: 268 LEKRMMFIILTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPGGVMKIFMVQGAFS 327 Query: 119 GLVGTAIGVGLGVVVALNIDVLVPAIERAFHVQFLPKSIYVISELPSELIWSDVYTIGGL 178 G GT GV GV++ N+ +V E V + +Y I LPS++ DV I + Sbjct: 328 GFFGTLAGVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACI 387 Query: 179 AVVLAFLATLYPSWAAARVKPAEALRYE 206 ++ L+F+ATLYPS A++ +PAEALRYE Sbjct: 388 SLGLSFVATLYPSRRASKTQPAEALRYE 415