BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0075.p (268 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1119 [L] COG0084 Mg-dependent DNase Rso Ralstonia solanacearum 247 2e-65 yjjVm [L] COG0084 Mg-dependent DNase Eco Escherichia coli K12 177 3e-44 PA3564 [L] COG0084 Mg-dependent DNase Pae Pseudomonas aeruginosa 163 5e-40 STM4564 [L] COG0084 Mg-dependent DNase Sty Salmonella typhimuriu... 158 1e-38 XF0177 [L] COG0084 Mg-dependent DNase Xfa Xylella fastidiosa 9a5c 155 1e-37 >RSc1119 [L] COG0084 Mg-dependent DNase Rso Ralstonia solanacearum Length = 271 Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 141/270 (52%), Positives = 171/270 (63%), Gaps = 12/270 (4%) Query: 1 MWVDTHCHLDAGEFGDRSAAVAAEAAQAGVRAIVIPAIAKVNFKEVGRLAREVGNAVYAL 60 MW+DTHCHLDA EF AV +A AGVR IV+PAIA+ NF V LA YAL Sbjct: 1 MWIDTHCHLDAREFDADRDAVIEQARVAGVRHIVVPAIARWNFDVVRALAHRQAGCCYAL 60 Query: 61 GIHPLYVPTAKESDLEILRTAIGEALDDPFFVGIGEIGLDFFVPALKEAPLREKQEFFFA 120 GIHPL A + DL LR + ++DDP FV IGEIGLDFF+P P E+Q + Sbjct: 61 GIHPLCAAQASDDDLIELRRQVAASMDDPRFVAIGEIGLDFFIPD----PQVERQNAVYQ 116 Query: 121 EQLKLARDFDLPVLLHVRRSQDIILKYLRRIRVPGGIAHAFNGSDQQARTFMELGLHLGF 180 QLK+AR+FDLPVLLHVR+SQD + R V GIAHAFNGSD QAR ++E G LGF Sbjct: 117 AQLKIAREFDLPVLLHVRKSQDQVRSAAARAGVRRGIAHAFNGSDDQARHYIETGFKLGF 176 Query: 181 GGAMTFPRSLQIRRLATELPLSSIVLETDAPDISPAW-------RHPGI-NTPDQIPRIG 232 GG +TF R+ +IRRLA E+PL SIVLETDAPD++PAW G N P ++ I Sbjct: 177 GGVLTFSRAHRIRRLAAEMPLESIVLETDAPDLAPAWLADDQFSEQVGTRNAPAEVAGIA 236 Query: 233 EVLAELRQLPLQEIAAATTANARAALPRLA 262 LA LR + + +AA N+ A+PRLA Sbjct: 237 AALAALRGIAVDTLAAQARRNSVEAIPRLA 266 >yjjVm [L] COG0084 Mg-dependent DNase Eco Escherichia coli K12 Length = 259 Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 104/254 (40%), Positives = 144/254 (56%), Gaps = 7/254 (2%) Query: 2 WVDTHCHLDAGEFGDRSAAVAAEAAQAGVRAIVIPAIAKVNFKEVGRLAREVGNAVYALG 61 ++DTHCH D F A AAQAGV I++PA NF V LA ALG Sbjct: 5 FIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALG 64 Query: 62 IHPLYVPTAKESDLEILRTAIGEALDDPFFVGIGEIGLDFFVPALKEAPLREKQEFFFAE 121 +HP + + LE L+ A+ V +GEIGLD F + P E+Q++ E Sbjct: 65 LHPGMLEKHSDVSLEQLQQALERRPAK--VVAVGEIGLDLF----GDDPQFERQQWLLDE 118 Query: 122 QLKLARDFDLPVLLHVRRSQDIILKYLRRIRVP-GGIAHAFNGSDQQARTFMELGLHLGF 180 QLKLA+ +DLPV+LH RR+ D + +L+R +P G+ H F+GS QQA F++LG +G Sbjct: 119 QLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGV 178 Query: 181 GGAMTFPRSLQIRRLATELPLSSIVLETDAPDISPAWRHPGINTPDQIPRIGEVLAELRQ 240 GG +T+PR+ + R + +LPL+S++LETDAPD+ N P+Q R+ VL ELR+ Sbjct: 179 GGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRR 238 Query: 241 LPLQEIAAATTANA 254 P EIA A N Sbjct: 239 EPADEIAQALLNNT 252 >PA3564 [L] COG0084 Mg-dependent DNase Pae Pseudomonas aeruginosa Length = 225 Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 141/223 (63%), Gaps = 7/223 (3%) Query: 34 VIPAIAKVNFKEVGRLAREVGNAVYALGIHPLYVPTAKESDLEILRTAIGEALDDPFFVG 93 ++ + + N++ V LA+ ALG+HP+Y+ + L+ LR + + Sbjct: 1 MVLGVYRENWQRVWDLAQAEDGLYAALGLHPVYLARHRPQHLDDLRQWLQRLRGETKLCA 60 Query: 94 IGEIGLDFFVPALKEAPLREKQEFFFAEQLKLARDFDLPVLLHVRRSQDIILKYLRRIRV 153 +GEIGLD+++ L R+ Q+ F QL+LA +F LP L+HVRR+ + L+RIR+ Sbjct: 61 VGEIGLDYYLEHLD----RDAQQALFEAQLRLAAEFRLPALIHVRRAHAATIATLKRIRL 116 Query: 154 PG-GIAHAFNGSDQQARTFMELGLHLGFGGAMTFPRSLQIRRLATELPLSSIVLETDAPD 212 GI HAF GS ++AR +++LG LG GGA T+P++ ++R++A ELP +IVLETDAPD Sbjct: 117 ERRGIIHAFAGSREEAREYLKLGFRLGLGGAPTWPQANRLRKVAAELPAEAIVLETDAPD 176 Query: 213 ISPAWRHPGI-NTPDQIPRIGEVLAELRQLPLQEIAAATTANA 254 ++P+ HPG N+P+ +P I LAELR + +E+AA+++ NA Sbjct: 177 MAPS-MHPGQRNSPEHLPDICRALAELRGVDAEELAASSSRNA 218 >STM4564 [L] COG0084 Mg-dependent DNase Sty Salmonella typhimurium LT2 Length = 257 Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/254 (37%), Positives = 140/254 (55%), Gaps = 8/254 (3%) Query: 2 WVDTHCHLDAGEFGDRSAAVAAEAAQAGVRAIVIPAIAKVNFKEVGRLAREVGNAVYALG 61 ++DTHCH D F A A +AGV I++PA +F V LA + ALG Sbjct: 5 FIDTHCHFDFPPFTGDERASIQRACEAGVEKIIVPATEAAHFPRVLALAARFPSLYAALG 64 Query: 62 IHPLYVPTAKESDLEILRTAIGEALDDPFFVGIGEIGLDFFVPALKEAPLREKQEFFFAE 121 +HP+ + + D + L+ A+ + + V +GEIGLD + ++ P +QE F Sbjct: 65 LHPIVIERHADDDSDKLQQALAQQQN---VVAVGEIGLDLY----RDDPQFARQERFLDA 117 Query: 122 QLKLARDFDLPVLLHVRRSQDIILKYLRRIRVP-GGIAHAFNGSDQQARTFMELGLHLGF 180 QL+LA+ +DLPV+LH RR+ D + +L+R +P G+ H F GS QQA F+ LG +G Sbjct: 118 QLQLAKRYDLPVILHSRRTHDKLAMHLKRQDLPRTGVVHGFAGSLQQAERFVRLGYKIGV 177 Query: 181 GGAMTFPRSLQIRRLATELPLSSIVLETDAPDISPAWRHPGINTPDQIPRIGEVLAELRQ 240 GG +T+PR+ + R + LPL +++LETDAPD+ N P+Q R+ + L ELR Sbjct: 178 GGTITYPRASKTRDVMARLPLDALLLETDAPDMPLKGFQGQPNRPEQAARVFDALCELRP 237 Query: 241 LPLQEIAAATTANA 254 P + IA N Sbjct: 238 EPAEVIADTLYRNT 251 >XF0177 [L] COG0084 Mg-dependent DNase Xfa Xylella fastidiosa 9a5c Length = 260 Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 87/252 (34%), Positives = 138/252 (54%), Gaps = 8/252 (3%) Query: 3 VDTHCHLDAGEFGDRSAAVAAEAAQAGVRAIVIPAIAKVNFKEVGRLAREVGNAVYALGI 62 +D+HCHLDA F A + A A AG+ A VIPA+ + ++ + + A G+ Sbjct: 6 IDSHCHLDADAFDGDRAEIIARAQAAGIIAQVIPAVTAAKWPKLRTICTQTSGLYPAYGL 65 Query: 63 HPLYVPTAKESDLEILRTAIGEALDDPFFVGIGEIGLDFFVPALKEAPLREKQEFFFAEQ 122 HP+++ + L LR + L+ IGE GLDF++ L RE Q +F Q Sbjct: 66 HPMFLTEHHPTHLHALR----DWLEHERPCAIGECGLDFYLEGLN----REMQHTYFIRQ 117 Query: 123 LKLARDFDLPVLLHVRRSQDIILKYLRRIRVPGGIAHAFNGSDQQARTFMELGLHLGFGG 182 L LAR++ LPV++H R + + ++ ++ + G+ H+F+GS +QAR +LG + GG Sbjct: 118 LMLAREYALPVIVHARHAVEEVIASIKTVGTLRGVVHSFSGSLEQARQLWKLGFMISLGG 177 Query: 183 AMTFPRSLQIRRLATELPLSSIVLETDAPDISPAWRHPGINTPDQIPRIGEVLAELRQLP 242 AMT+PR+ ++ +LA E PL ++LETDAP + N P ++ I + +A LR+ Sbjct: 178 AMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQD 237 Query: 243 LQEIAAATTANA 254 EI+ T AN Sbjct: 238 RTEISKVTRANT 249