BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0015.p         (118 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0552 [R] COG2137 Uncharacterized protein conserved in bacteri...    65   4e-11

>RSc0552 [R] COG2137 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 159

 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 6/101 (5%)

Query: 10  WSSRVFFPRNVFPNRWCIAARXARYGNQRIISELHGHGIEGEAIAELKADLAAGEGERAA 69
           W S   F  +V      +  R +RYG  R++ EL  H +  +A+ E+KA L A E  RA 
Sbjct: 54  WLSNTRFAESV------VHRRASRYGTARLMQELKTHELGDDALGEVKAQLQASEMARAK 107

Query: 70  QVLRRKYAAPPEDAETRAKQMRFLQQRGFSHRSIREAFQTA 110
            V  R++  PP D   RAKQ+RF+  RGFS   +    Q A
Sbjct: 108 AVWERRFGRPPADMAERAKQVRFMVARGFSRAVVSRIIQGA 148