BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0008.p (297 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3448 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 308 1e-83 AGl1398 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 201 2e-51 YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 194 2e-49 PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 194 2e-49 mll4557 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 193 3e-49 >PA3448 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 274 Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 166/247 (67%), Positives = 200/247 (80%), Gaps = 1/247 (0%) Query: 42 PGRFTGWIVPLLFLLAVEAGARLDWIPARLLPPPSELAHTLWTLAQRGELLPHIAASLAR 101 PG + W +PLL L + EA RL W+PA +P PS + TL LA RGEL H+ ASLAR Sbjct: 22 PGAWRAWALPLLALSSWEALVRLGWLPAYQMPAPSGILLTLVELA-RGELWGHVGASLAR 80 Query: 102 VASGFVIGSVLAVALGLLVGISRRAEALLEPSFQALRAIPSLAWIPLLLLWLGIDETPKV 161 VA+GF IGS LA+ +G VG+SRRAEA LEPSFQALRAIPSLAW+PLLLLW GIDETPK+ Sbjct: 81 VAAGFAIGSGLALVVGTWVGLSRRAEAYLEPSFQALRAIPSLAWVPLLLLWFGIDETPKI 140 Query: 162 VLIAIGAFFPVYLNLVAGIRDIDHKLIEVGTSSGLSTGELIRHILLPASLPYLFAGLRGG 221 VLIA+GAFFPVYL LVAG+R +D K +E+G LS L+R ILLPA+LP LF GLRG Sbjct: 141 VLIALGAFFPVYLALVAGVRGVDRKWVELGRLYRLSRFALVRRILLPAALPNLFTGLRGA 200 Query: 222 LSLAWMFLVAAELIAATKGVGYLLSDGRESSRPDLVLSAILILALLGKVSDSLLRTVEQK 281 LSL+WMFLVAAELIAAT+G+GYLLSDGRE+SRPDLV++AIL+LA LGK+SD LLR++E++ Sbjct: 201 LSLSWMFLVAAELIAATQGLGYLLSDGRETSRPDLVIAAILVLAALGKLSDGLLRSLERR 260 Query: 282 SLGWRDA 288 +L WRD+ Sbjct: 261 ALRWRDS 267 >AGl1398 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 260 Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 104/246 (42%), Positives = 154/246 (62%) Query: 46 TGWIVPLLFLLAVEAGARLDWIPARLLPPPSELAHTLWTLAQRGELLPHIAASLARVASG 105 TGW++P L L E AR+ I A +LP PS +A W L GEL+ +I S AR +G Sbjct: 14 TGWLLPALILAGWEVAARVGLISANVLPAPSAVAEAFWRLLLSGELIANIGVSSARALAG 73 Query: 106 FVIGSVLAVALGLLVGISRRAEALLEPSFQALRAIPSLAWIPLLLLWLGIDETPKVVLIA 165 F IG + GL G+SR + + + + Q +R IP LA IPL++LW GIDE K+ L+A Sbjct: 74 FAIGGSIGFIFGLANGLSRFSRSFTDTTLQMIRNIPHLALIPLVILWFGIDEEAKLFLVA 133 Query: 166 IGAFFPVYLNLVAGIRDIDHKLIEVGTSSGLSTGELIRHILLPASLPYLFAGLRGGLSLA 225 +G FFP+Y+N + GI+ +D +L+E+G + G+S L R ++LP +LP +F GLR L + Sbjct: 134 LGVFFPIYINTLLGIQGVDPQLVEMGRTYGMSPFTLFRRVILPGALPSIFTGLRYALGIM 193 Query: 226 WMFLVAAELIAATKGVGYLLSDGRESSRPDLVLSAILILALLGKVSDSLLRTVEQKSLGW 285 W+ L+ AE I+++ G+GY+ RE D+V+ +ILI ALLGK++DS R +E L W Sbjct: 194 WLTLIVAETISSSSGLGYMAMQAREFLLIDVVVLSILIYALLGKLADSFARFLESIFLQW 253 Query: 286 RDARRR 291 A ++ Sbjct: 254 HPAFKK 259 >YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Ype Yersinia pestis Length = 265 Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 99/252 (39%), Positives = 151/252 (59%) Query: 44 RFTGWIVPLLFLLAVEAGARLDWIPARLLPPPSELAHTLWTLAQRGELLPHIAASLARVA 103 R WI+P+ ++ + W+ R+LP PS + W L + GEL H+ S R Sbjct: 12 RLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRAL 71 Query: 104 SGFVIGSVLAVALGLLVGISRRAEALLEPSFQALRAIPSLAWIPLLLLWLGIDETPKVVL 163 GF IG + + LG++ G+SR E LL S Q +R +P LA IPL++LW GIDE+ K+ L Sbjct: 72 IGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFL 131 Query: 164 IAIGAFFPVYLNLVAGIRDIDHKLIEVGTSSGLSTGELIRHILLPASLPYLFAGLRGGLS 223 +A+G FP+YLN GI++ID L+E+ S GLS L+ ++LP +LP + G+R L Sbjct: 132 VALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALG 191 Query: 224 LAWMFLVAAELIAATKGVGYLLSDGRESSRPDLVLSAILILALLGKVSDSLLRTVEQKSL 283 W+ L+ AE I+A G+GYL + RE + D+V+ AI++ ALLGK++D + +E+ L Sbjct: 192 FMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSAQLLERVWL 251 Query: 284 GWRDARRRSHGK 295 W A ++ G+ Sbjct: 252 RWHPAYQQKSGE 263 >PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 262 Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 103/251 (41%), Positives = 152/251 (60%) Query: 44 RFTGWIVPLLFLLAVEAGARLDWIPARLLPPPSELAHTLWTLAQRGELLPHIAASLARVA 103 R W +PL+ L +A W+ +R+LP PS + W L + GE+ H+A S R A Sbjct: 10 RLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWRAA 69 Query: 104 SGFVIGSVLAVALGLLVGISRRAEALLEPSFQALRAIPSLAWIPLLLLWLGIDETPKVVL 163 GF+IG + + LG + G+S+ E L+ S Q +R +P LA IPL++LW GIDE+ K+ L Sbjct: 70 IGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFL 129 Query: 164 IAIGAFFPVYLNLVAGIRDIDHKLIEVGTSSGLSTGELIRHILLPASLPYLFAGLRGGLS 223 +A+G FP+YLN GIR ID L+E+ S GLS L R ++LP +LP + G+R L Sbjct: 130 VALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGVRFALG 189 Query: 224 LAWMFLVAAELIAATKGVGYLLSDGRESSRPDLVLSAILILALLGKVSDSLLRTVEQKSL 283 W+ L+ AE I+A+ G+GYL + RE + D+V+ AIL+ A+LGK++D R +E+ L Sbjct: 190 FMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARGLERVWL 249 Query: 284 GWRDARRRSHG 294 W A + G Sbjct: 250 RWHPAYQVKGG 260 >mll4557 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 258 Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 107/245 (43%), Positives = 157/245 (64%) Query: 47 GWIVPLLFLLAVEAGARLDWIPARLLPPPSELAHTLWTLAQRGELLPHIAASLARVASGF 106 GW++P+L + EA +R +PA +LP PS +A W L GEL+ +I S AR +GF Sbjct: 13 GWVLPVLVIAGWEAASRAGLVPANVLPAPSAVAEAFWRLTLSGELIRNIGVSTARALAGF 72 Query: 107 VIGSVLAVALGLLVGISRRAEALLEPSFQALRAIPSLAWIPLLLLWLGIDETPKVVLIAI 166 IG + ALGL G+SR + L + + Q +R IP LA IPL++LW GIDE K+ L+A+ Sbjct: 73 GIGGSIGFALGLANGLSRLSRGLTDTTLQMVRNIPHLALIPLVILWFGIDEEAKLFLVAL 132 Query: 167 GAFFPVYLNLVAGIRDIDHKLIEVGTSSGLSTGELIRHILLPASLPYLFAGLRGGLSLAW 226 G FFP+Y+N + GI+ +D +L+E+G G+ L ++LP +LP +F GLR L + W Sbjct: 133 GVFFPIYVNTLLGIQSVDPQLVEMGRVYGMDRRALFFRVILPGALPAIFVGLRYALGIMW 192 Query: 227 MFLVAAELIAATKGVGYLLSDGRESSRPDLVLSAILILALLGKVSDSLLRTVEQKSLGWR 286 + L+ AE I+A+ G+GY+ RE D+V+ +ILI ALLGK++DSL R +E+ SLGW Sbjct: 193 LTLIVAETISASSGLGYMAMQAREFLLIDVVVLSILIYALLGKLADSLARLLERLSLGWH 252 Query: 287 DARRR 291 A + Sbjct: 253 PAFQN 257