BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0004.p (527 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA5078 [P] COG3131 Periplasmic glucans biosynthesis protein Pae ... 633 0.0 mdoG [P] COG3131 Periplasmic glucans biosynthesis protein Eco Es... 613 e-175 ZmdoG [P] COG3131 Periplasmic glucans biosynthesis protein EcZ E... 613 e-175 ECs1426 [P] COG3131 Periplasmic glucans biosynthesis protein Ecs... 613 e-175 STM1150 [P] COG3131 Periplasmic glucans biosynthesis protein Sty... 613 e-175 >PA5078 [P] COG3131 Periplasmic glucans biosynthesis protein Pae Pseudomonas aeruginosa Length = 525 Score = 633 bits (1632), Expect = 0.0, Method: Compositional matrix adjust. Identities = 301/509 (59%), Positives = 379/509 (74%), Gaps = 2/509 (0%) Query: 11 LQGLVLSASLLAASVQAQSAQGFDLNQAVARAKELAAKPYQKPVSNLSPTFAAMQFADYM 70 ++ L+L+ S A V A F ++ ++AK+LA Y P SNL F+ M+FADY Sbjct: 15 VRTLLLAGSTALAFVAA-PVWAFSIDDVASKAKDLAGDKYSAPTSNLPSEFSEMKFADYQ 73 Query: 71 KIQPKSEKFEWRDQKTPFKLAFYHQGMQFNAPVAIHEIIDGRVQDVGYSTDRFNFGDLAL 130 +I+ +E+ W KTPFKL+FYHQGM F+ PV I+E+ V+ + Y +F+FG L Sbjct: 74 QIRFINERAYWGKLKTPFKLSFYHQGMHFDTPVKINEVTATTVKPIKYDRTKFDFGSLKF 133 Query: 131 AKDSTAHLGYAGFRVVYPLNRDDKEDEVMSVLGASYFRVIGKGQVYGLSARGLAIDTAMM 190 +++T LGYAGFRV+YP+N+ DK+DE+ + LGASYFRV+GKGQVYGLSARGLAIDTA+ Sbjct: 134 DENATKDLGYAGFRVLYPINKADKQDEIATFLGASYFRVVGKGQVYGLSARGLAIDTALP 193 Query: 191 SGEEFPHFTEFWIQRPAPGEKQLTFYALLDSPRATGAYKFTLTPGKDALLDVQARVFLRA 250 SGEEFP F EFWI+RP +KQL YALLDSPRATGAY+F L PGKDA++DVQARVFLR Sbjct: 194 SGEEFPRFREFWIERPKAQDKQLVIYALLDSPRATGAYRFVLRPGKDAVMDVQARVFLRD 253 Query: 251 EVGRLGIAPLTSMFLFGPNQQSSRRNFRPAIHDSNGLAIHTGNGEWLWRPLNDPQNVEVS 310 +V +LG+APLTSM+LFG NQ S + NFRP +HDS+GL IH GNGEWLWRPLN+P+++ VS Sbjct: 254 KVSKLGLAPLTSMYLFGSNQPSEQHNFRPELHDSSGLQIHAGNGEWLWRPLNNPKHLSVS 313 Query: 311 SFEVSNPRGFGLLQRGREFSSYEDLKDRYDLRPSAWIEPKGDWGKGAVQLVEIPTADETN 370 +F V NP+GFGLLQRGREFS YEDL DRYDLRPSAWIEPKGDWGKG V+LVEIPT DETN Sbjct: 314 TFSVENPKGFGLLQRGREFSRYEDLDDRYDLRPSAWIEPKGDWGKGTVELVEIPTPDETN 373 Query: 371 DNIVAYWVPAQQPARGTPLAYDYRIHWTMDEPAILNNEVGWVKQTFHTDGELTQANLIRA 430 DNIVA+W P QP G PL + YR+HWTMDE + + + WVKQT + G++ Q NLIR Sbjct: 374 DNIVAFWNPETQPEVGKPLDFAYRLHWTMDEDELHDPKSSWVKQTMRSVGDVKQKNLIRQ 433 Query: 431 FDGTTALLVDFTGGPLGSLPAGTAVQPQVNVSNNGELIDAQLQPNPAINGWRLTLRVKIR 490 DG+TAL+VDF G L L V QV+ +N E+++ L+ NP + GWRLTLR+K++ Sbjct: 434 QDGSTALVVDFEGPALKDLAPDAPVTTQVSTDSNAEVVENSLRYNPVLKGWRLTLRIKVK 493 Query: 491 NVAQAVELRAALTANG-KPLTETWSYQLP 518 + + VE+RAAL KPL+ETWSYQLP Sbjct: 494 DPKKPVEMRAALVDEAQKPLSETWSYQLP 522 >mdoG [P] COG3131 Periplasmic glucans biosynthesis protein Eco Escherichia coli K12 Length = 511 Score = 613 bits (1581), Expect = e-175, Method: Compositional matrix adjust. Identities = 283/503 (56%), Positives = 374/503 (74%), Gaps = 1/503 (0%) Query: 16 LSASLLAASVQAQSAQGFDLNQAVARAKELAAKPYQKPVSNLSPTFAAMQFADYMKIQPK 75 LSA+++ ++ S+ F ++ +A+ LA K Y+ P SNL F M++ADY +IQ Sbjct: 7 LSAAVML-TLYTSSSWAFSIDDVAKQAQSLAGKGYETPKSNLPSVFRDMKYADYQQIQFN 65 Query: 76 SEKFEWRDQKTPFKLAFYHQGMQFNAPVAIHEIIDGRVQDVGYSTDRFNFGDLALAKDST 135 +K W + KTPFKL FYHQGM F+ PV I+E+ V+ + YS D F FGD+ KD+ Sbjct: 66 HDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATAVKRIKYSPDYFTFGDVQHDKDTV 125 Query: 136 AHLGYAGFRVVYPLNRDDKEDEVMSVLGASYFRVIGKGQVYGLSARGLAIDTAMMSGEEF 195 LG+AGF+V+YP+N DK DE++S+LGASYFRVIG GQVYGLSARGLAIDTA+ SGEEF Sbjct: 126 KDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSGEEF 185 Query: 196 PHFTEFWIQRPAPGEKQLTFYALLDSPRATGAYKFTLTPGKDALLDVQARVFLRAEVGRL 255 P F EFWI+RP P +K+LT YALLDSPRATGAYKF + PG+D ++DVQ++++LR +VG+L Sbjct: 186 PRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQSKIYLRDKVGKL 245 Query: 256 GIAPLTSMFLFGPNQQSSRRNFRPAIHDSNGLAIHTGNGEWLWRPLNDPQNVEVSSFEVS 315 G+APLTSMFLFGPNQ S N+RP +HDSNGL+IH GNGEW+WRPLN+P+++ VSSF + Sbjct: 246 GVAPLTSMFLFGPNQPSPANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSME 305 Query: 316 NPRGFGLLQRGREFSSYEDLKDRYDLRPSAWIEPKGDWGKGAVQLVEIPTADETNDNIVA 375 NP+GFGLLQRGR+FS +EDL DRYDLRPSAW+ PKG+WGKG+V+LVEIPT DETNDNIVA Sbjct: 306 NPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGEWGKGSVELVEIPTNDETNDNIVA 365 Query: 376 YWVPAQQPARGTPLAYDYRIHWTMDEPAILNNEVGWVKQTFHTDGELTQANLIRAFDGTT 435 YW P Q P G + + Y I ++ DE + + WV+QT + G++ Q+NLIR DGT Sbjct: 366 YWTPDQLPEPGKEMNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTI 425 Query: 436 ALLVDFTGGPLGSLPAGTAVQPQVNVSNNGELIDAQLQPNPAINGWRLTLRVKIRNVAQA 495 A +VDFTG + LP T V Q ++ +NGE++++ ++ NP GWRL +RVK+++ + Sbjct: 426 AFVVDFTGAEMKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKT 485 Query: 496 VELRAALTANGKPLTETWSYQLP 518 E+RAAL + L+ETWSYQLP Sbjct: 486 TEMRAALVNADQTLSETWSYQLP 508 >ZmdoG [P] COG3131 Periplasmic glucans biosynthesis protein EcZ Escherichia coli O157:H7 EDL933 Length = 511 Score = 613 bits (1580), Expect = e-175, Method: Compositional matrix adjust. Identities = 283/503 (56%), Positives = 374/503 (74%), Gaps = 1/503 (0%) Query: 16 LSASLLAASVQAQSAQGFDLNQAVARAKELAAKPYQKPVSNLSPTFAAMQFADYMKIQPK 75 LSA+++ ++ S+ F ++ +A+ LA K Y+ P SNL F M++ADY +IQ Sbjct: 7 LSAAVML-TLYTSSSWAFSIDDVAKQAQSLAGKGYEAPKSNLPSVFRDMKYADYQQIQFN 65 Query: 76 SEKFEWRDQKTPFKLAFYHQGMQFNAPVAIHEIIDGRVQDVGYSTDRFNFGDLALAKDST 135 +K W + KTPFKL FYHQGM F+ PV I+E+ V+ + YS D F FGD+ KD+ Sbjct: 66 HDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATAVKRIKYSPDYFTFGDVQHDKDTV 125 Query: 136 AHLGYAGFRVVYPLNRDDKEDEVMSVLGASYFRVIGKGQVYGLSARGLAIDTAMMSGEEF 195 LG+AGF+V+YP+N DK DE++S+LGASYFRVIG GQVYGLSARGLAIDTA+ SGEEF Sbjct: 126 KDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSGEEF 185 Query: 196 PHFTEFWIQRPAPGEKQLTFYALLDSPRATGAYKFTLTPGKDALLDVQARVFLRAEVGRL 255 P F EFWI+RP P +K+LT YALLDSPRATGAYKF + PG+D ++DVQ++++LR +VG+L Sbjct: 186 PRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQSKIYLRDKVGKL 245 Query: 256 GIAPLTSMFLFGPNQQSSRRNFRPAIHDSNGLAIHTGNGEWLWRPLNDPQNVEVSSFEVS 315 G+APLTSMFLFGPNQ S N+RP +HDSNGL+IH GNGEW+WRPLN+P+++ VSSF + Sbjct: 246 GVAPLTSMFLFGPNQPSPANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSME 305 Query: 316 NPRGFGLLQRGREFSSYEDLKDRYDLRPSAWIEPKGDWGKGAVQLVEIPTADETNDNIVA 375 NP+GFGLLQRGR+FS +EDL DRYDLRPSAW+ PKG+WGKG+V+LVEIPT DETNDNIVA Sbjct: 306 NPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGEWGKGSVELVEIPTNDETNDNIVA 365 Query: 376 YWVPAQQPARGTPLAYDYRIHWTMDEPAILNNEVGWVKQTFHTDGELTQANLIRAFDGTT 435 YW P Q P G + + Y I ++ DE + + WV+QT + G++ Q+NLIR DGT Sbjct: 366 YWTPDQLPEPGKEMNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTI 425 Query: 436 ALLVDFTGGPLGSLPAGTAVQPQVNVSNNGELIDAQLQPNPAINGWRLTLRVKIRNVAQA 495 A +VDFTG + LP T V Q ++ +NGE++++ ++ NP GWRL +RVK+++ + Sbjct: 426 AFVVDFTGAEMKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKT 485 Query: 496 VELRAALTANGKPLTETWSYQLP 518 E+RAAL + L+ETWSYQLP Sbjct: 486 TEMRAALVNADQTLSETWSYQLP 508 >ECs1426 [P] COG3131 Periplasmic glucans biosynthesis protein Ecs Escherichia coli O157:H7 Length = 511 Score = 613 bits (1580), Expect = e-175, Method: Compositional matrix adjust. Identities = 283/503 (56%), Positives = 374/503 (74%), Gaps = 1/503 (0%) Query: 16 LSASLLAASVQAQSAQGFDLNQAVARAKELAAKPYQKPVSNLSPTFAAMQFADYMKIQPK 75 LSA+++ ++ S+ F ++ +A+ LA K Y+ P SNL F M++ADY +IQ Sbjct: 7 LSAAVML-TLYTSSSWAFSIDDVAKQAQSLAGKGYEAPKSNLPSVFRDMKYADYQQIQFN 65 Query: 76 SEKFEWRDQKTPFKLAFYHQGMQFNAPVAIHEIIDGRVQDVGYSTDRFNFGDLALAKDST 135 +K W + KTPFKL FYHQGM F+ PV I+E+ V+ + YS D F FGD+ KD+ Sbjct: 66 HDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATAVKRIKYSPDYFTFGDVQHDKDTV 125 Query: 136 AHLGYAGFRVVYPLNRDDKEDEVMSVLGASYFRVIGKGQVYGLSARGLAIDTAMMSGEEF 195 LG+AGF+V+YP+N DK DE++S+LGASYFRVIG GQVYGLSARGLAIDTA+ SGEEF Sbjct: 126 KDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSGEEF 185 Query: 196 PHFTEFWIQRPAPGEKQLTFYALLDSPRATGAYKFTLTPGKDALLDVQARVFLRAEVGRL 255 P F EFWI+RP P +K+LT YALLDSPRATGAYKF + PG+D ++DVQ++++LR +VG+L Sbjct: 186 PRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQSKIYLRDKVGKL 245 Query: 256 GIAPLTSMFLFGPNQQSSRRNFRPAIHDSNGLAIHTGNGEWLWRPLNDPQNVEVSSFEVS 315 G+APLTSMFLFGPNQ S N+RP +HDSNGL+IH GNGEW+WRPLN+P+++ VSSF + Sbjct: 246 GVAPLTSMFLFGPNQPSPANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSME 305 Query: 316 NPRGFGLLQRGREFSSYEDLKDRYDLRPSAWIEPKGDWGKGAVQLVEIPTADETNDNIVA 375 NP+GFGLLQRGR+FS +EDL DRYDLRPSAW+ PKG+WGKG+V+LVEIPT DETNDNIVA Sbjct: 306 NPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGEWGKGSVELVEIPTNDETNDNIVA 365 Query: 376 YWVPAQQPARGTPLAYDYRIHWTMDEPAILNNEVGWVKQTFHTDGELTQANLIRAFDGTT 435 YW P Q P G + + Y I ++ DE + + WV+QT + G++ Q+NLIR DGT Sbjct: 366 YWTPDQLPEPGKEMNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTI 425 Query: 436 ALLVDFTGGPLGSLPAGTAVQPQVNVSNNGELIDAQLQPNPAINGWRLTLRVKIRNVAQA 495 A +VDFTG + LP T V Q ++ +NGE++++ ++ NP GWRL +RVK+++ + Sbjct: 426 AFVVDFTGAEMKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKT 485 Query: 496 VELRAALTANGKPLTETWSYQLP 518 E+RAAL + L+ETWSYQLP Sbjct: 486 TEMRAALVNADQTLSETWSYQLP 508 >STM1150 [P] COG3131 Periplasmic glucans biosynthesis protein Sty Salmonella typhimurium LT2 Length = 511 Score = 613 bits (1580), Expect = e-175, Method: Compositional matrix adjust. Identities = 284/498 (57%), Positives = 369/498 (74%) Query: 21 LAASVQAQSAQGFDLNQAVARAKELAAKPYQKPVSNLSPTFAAMQFADYMKIQPKSEKFE 80 + ++ A S+ F ++ +A+ LA K Y+ P SNL F M++ADY +IQ S+K Sbjct: 11 IMLTLYASSSWAFSIDDVAKQAQSLAGKGYEAPKSNLPSVFRDMKYADYQQIQFNSDKAY 70 Query: 81 WRDQKTPFKLAFYHQGMQFNAPVAIHEIIDGRVQDVGYSTDRFNFGDLALAKDSTAHLGY 140 W + KTPFKL FYHQGM F+ PV I+E+ V+ + YS D FNFG++ KD+ LG+ Sbjct: 71 WNNLKTPFKLEFYHQGMYFDTPVKINEVTATTVKRIKYSPDYFNFGNVQHDKDTVKDLGF 130 Query: 141 AGFRVVYPLNRDDKEDEVMSVLGASYFRVIGKGQVYGLSARGLAIDTAMMSGEEFPHFTE 200 AGF+V+YP+N DK DE++S+LGASYFRVIG GQVYGLSARGLAIDTA+ SGEEFP F E Sbjct: 131 AGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSGEEFPRFRE 190 Query: 201 FWIQRPAPGEKQLTFYALLDSPRATGAYKFTLTPGKDALLDVQARVFLRAEVGRLGIAPL 260 FWI+RP P +K+LT YALLDSPRATGAY+F + PG+D ++DVQ++V+LR +VG+LG+APL Sbjct: 191 FWIERPKPTDKRLTVYALLDSPRATGAYRFVIIPGRDTVVDVQSKVYLRDKVGKLGVAPL 250 Query: 261 TSMFLFGPNQQSSRRNFRPAIHDSNGLAIHTGNGEWLWRPLNDPQNVEVSSFEVSNPRGF 320 TSMFLFGPNQ S N+RP +HDSNGL+IH GNGEW+WRPLN+P+++ VSS+ + NP+GF Sbjct: 251 TSMFLFGPNQPSPTTNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSYAMENPQGF 310 Query: 321 GLLQRGREFSSYEDLKDRYDLRPSAWIEPKGDWGKGAVQLVEIPTADETNDNIVAYWVPA 380 GLLQRGREFS +EDL DRYDLRPSAWI PKGDWGKG V+LVEIPT DETNDNIVAYW P Sbjct: 311 GLLQRGREFSRFEDLDDRYDLRPSAWITPKGDWGKGKVELVEIPTNDETNDNIVAYWTPD 370 Query: 381 QQPARGTPLAYDYRIHWTMDEPAILNNEVGWVKQTFHTDGELTQANLIRAFDGTTALLVD 440 Q P G + + Y + ++ DE + + WV QT + G++ Q+NLIR DGT A +VD Sbjct: 371 QLPEPGKEMNFKYTLTFSRDEDKLHAPDNAWVLQTRRSTGDVKQSNLIRQPDGTIAFVVD 430 Query: 441 FTGGPLGSLPAGTAVQPQVNVSNNGELIDAQLQPNPAINGWRLTLRVKIRNVAQAVELRA 500 F G + LP T V Q ++ +NGE++D+ ++ NP GWRL LRVK+++ + E+RA Sbjct: 431 FVGADMKKLPPDTPVAAQTSIGDNGEIVDSNVRYNPVTKGWRLMLRVKVKDAKKTTEMRA 490 Query: 501 ALTANGKPLTETWSYQLP 518 AL + L+ETWSYQLP Sbjct: 491 ALVNADQTLSETWSYQLP 508