BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0262.p         (89 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0912 Non COG                                                        86   2e-17
NMB0339 [G] COG2956 Predicted N-acetylglucosaminyl transferase N...    59   4e-09
NMA2148 [G] COG2956 Predicted N-acetylglucosaminyl transferase N...    59   4e-09

>RSc0912 Non COG
          Length = 425

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 58/116 (50%), Gaps = 30/116 (25%)

Query: 1   VLVSDELRRTPTLLGLDKFLEARMMSAPQTVRPE-------------------------- 34
            L+ +++RR P+L+ L + +EA    A + V  E                          
Sbjct: 303 ALMREQIRRQPSLMALTRLVEAEATRASEAVSHEAAAVAAPISDSALADPVEAGSNADIQ 362

Query: 35  ----LAVVKTLVHGYTQKLARYQCSHCGFKARQFYWQCPGCSQWETYPPRRTEELN 86
               L  ++ L+   T+ LARY C  CGF+AR FYWQCPGC++WETY PRRTE L 
Sbjct: 363 RAQDLGAIRDLLQSRTRNLARYTCQECGFRARLFYWQCPGCNRWETYAPRRTEALG 418


>NMB0339 [G] COG2956 Predicted N-acetylglucosaminyl transferase Nme
           Neisseria meningitidis MC58
          Length = 389

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 45/77 (58%)

Query: 7   LRRTPTLLGLDKFLEARMMSAPQTVRPELAVVKTLVHGYTQKLARYQCSHCGFKARQFYW 66
           +RR P L G+ + L  ++       + +  ++++++    Q+   Y+C +C FK++ F+W
Sbjct: 312 VRRKPDLNGVYRLLGLKLSDMNPAWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFW 371

Query: 67  QCPGCSQWETYPPRRTE 83
            CP C++W+T+ P + E
Sbjct: 372 HCPACNKWQTFTPNKIE 388


>NMA2148 [G] COG2956 Predicted N-acetylglucosaminyl transferase NmA
           Neisseria meningitidis Z2491
          Length = 389

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 45/77 (58%)

Query: 7   LRRTPTLLGLDKFLEARMMSAPQTVRPELAVVKTLVHGYTQKLARYQCSHCGFKARQFYW 66
           +RR P L G+ + L  ++       + +  ++++++    Q+   Y+C +C FK++ F+W
Sbjct: 312 VRRKPDLNGVYRLLGLKLSDLDPAWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFW 371

Query: 67  QCPGCSQWETYPPRRTE 83
            CP C++W+T+ P + E
Sbjct: 372 HCPACNKWQTFTPNKIE 388