BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0261.p         (259 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0912 Non COG                                                       121   2e-27
NMB0339 [G] COG2956 Predicted N-acetylglucosaminyl transferase N...   102   7e-22
NMA2148 [G] COG2956 Predicted N-acetylglucosaminyl transferase N...   101   2e-21
yciM [G] COG2956 Predicted N-acetylglucosaminyl transferase Eco ...   100   2e-21
ZyciM [G] COG2956 Predicted N-acetylglucosaminyl transferase EcZ...   100   2e-21

>RSc0912 Non COG
          Length = 425

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 84/124 (67%)

Query: 8   PDLPAEHQGHALYELGQDYLKAGLLDRAEETFNKLIDTPYSAQAGRALLEIYQREKEWER 67
           PDLPA  + HALYELGQD+L+AGLLDRAEE+   L++  ++  A R LLE+Y+ EKEW +
Sbjct: 100 PDLPANERDHALYELGQDFLRAGLLDRAEESLRMLMEGVFAEPAKRVLLELYEVEKEWRK 159

Query: 68  AISAAEILQATGAGGRQREIAQFYCELAADELVRTNTDAAMALLDKALAADRKSVRATML 127
           AI AA  LQ         +IAQF CELA + L R +  AA+  L++AL  + K+VRAT+ 
Sbjct: 160 AIDAARELQTLQGQDYSVQIAQFCCELAQESLQRKDVSAAVEWLERALQENPKNVRATIQ 219

Query: 128 IGDA 131
           +GD 
Sbjct: 220 LGDV 223


>NMB0339 [G] COG2956 Predicted N-acetylglucosaminyl transferase Nme
           Neisseria meningitidis MC58
          Length = 389

 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 78/124 (62%), Gaps = 1/124 (0%)

Query: 7   TPDLPAEHQGHALYELGQDYLKAGLLDRAEETFNKLIDTPYSAQAGRALLEIYQREKEWE 66
           +PD   E +   L+EL Q+Y  AGL+DRAE+ F  L D   + +A + LL IYQ++++WE
Sbjct: 103 SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRDWE 162

Query: 67  RAISAAEILQATGAGGRQREIAQFYCELAADELVRTNTDAAMALLDKALAADRKSVRATM 126
           +A+  A +L +      Q EIAQFYCELA   L ++N D A   + KAL A++K  RA M
Sbjct: 163 KAVETARLL-SHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANM 221

Query: 127 LIGD 130
           ++GD
Sbjct: 222 ILGD 225


>NMA2148 [G] COG2956 Predicted N-acetylglucosaminyl transferase NmA
           Neisseria meningitidis Z2491
          Length = 389

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 78/124 (62%), Gaps = 1/124 (0%)

Query: 7   TPDLPAEHQGHALYELGQDYLKAGLLDRAEETFNKLIDTPYSAQAGRALLEIYQREKEWE 66
           +PD     +   L+EL Q+Y  AGL+DRAE+ F  L D   + +A + LL IYQ++++WE
Sbjct: 103 SPDTTGAKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRDWE 162

Query: 67  RAISAAEILQATGAGGRQREIAQFYCELAADELVRTNTDAAMALLDKALAADRKSVRATM 126
           +A+  A +L +      Q EIAQFYCELA   L ++N DAA   + KAL A++K  RA M
Sbjct: 163 KAVETARLL-SHDDQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANM 221

Query: 127 LIGD 130
           ++GD
Sbjct: 222 ILGD 225


>yciM [G] COG2956 Predicted N-acetylglucosaminyl transferase Eco
           Escherichia coli K12
          Length = 389

 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 1/130 (0%)

Query: 7   TPDLPAEHQGHALYELGQDYLKAGLLDRAEETFNKLID-TPYSAQAGRALLEIYQREKEW 65
           +  L  E +  A+ +LG+DY+ AGL DRAE+ FN+L D T +   A + LL+IYQ   EW
Sbjct: 98  SASLTYEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEW 157

Query: 66  ERAISAAEILQATGAGGRQREIAQFYCELAADELVRTNTDAAMALLDKALAADRKSVRAT 125
           ++AI  AE L   G   ++ EIA FYCELA   +   + D AM LL K  AAD+ S R +
Sbjct: 158 QKAIDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVS 217

Query: 126 MLIGDALRAR 135
           +++G    A+
Sbjct: 218 IMMGRVFMAK 227


>ZyciM [G] COG2956 Predicted N-acetylglucosaminyl transferase EcZ
           Escherichia coli O157:H7 EDL933
          Length = 389

 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 1/130 (0%)

Query: 7   TPDLPAEHQGHALYELGQDYLKAGLLDRAEETFNKLID-TPYSAQAGRALLEIYQREKEW 65
           +  L  E +  A+ +LG+DY+ AGL DRAE+ FN+L D T +   A + LL+IYQ   EW
Sbjct: 98  SASLTYEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEW 157

Query: 66  ERAISAAEILQATGAGGRQREIAQFYCELAADELVRTNTDAAMALLDKALAADRKSVRAT 125
           ++AI  AE L   G   ++ EIA FYCELA   +   + D AM LL K  AAD+ S R +
Sbjct: 158 QKAIDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVS 217

Query: 126 MLIGDALRAR 135
           +++G    A+
Sbjct: 218 IMMGRVFMAK 227