BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0213.p (555 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr3215_2 [T] COG0642 Signal transduction histidine kinase Mlo M... 171 3e-42 VC2453_1 [T] COG0642 Signal transduction histidine kinase Vch Vi... 171 4e-42 mll3725_2 [T] COG0642 Signal transduction histidine kinase Mlo M... 171 5e-42 VCA0709_1 [T] COG0642 Signal transduction histidine kinase Vch V... 166 1e-40 mlr3786_1 [T] COG0642 Signal transduction histidine kinase Mlo M... 162 2e-39 >mlr3215_2 [T] COG0642 Signal transduction histidine kinase Mlo Mesorhizobium loti Length = 382 Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 97/229 (42%), Positives = 137/229 (59%), Gaps = 6/229 (2%) Query: 330 AKSRFLSNMSHEFRTPLNGVLGYSDALREELGESPLAQ-YATAIHDSGNRLLELVESILE 388 AKSRFL+ +SHE RTP+NG++G + L + SP Q Y AI S + LL L+E +L+ Sbjct: 1 AKSRFLATVSHEIRTPMNGIMGMARLL-ADTSLSPEQQTYVGAISTSASALLALIEDLLD 59 Query: 389 VTALEDRRVAVHREPENIRELVSQAIARHYQAAQTKGLQLECRISDDVPQIIVCDQRKVL 448 + +E R +P ++RE+ I A K + L C + DVPQ+I D +V Sbjct: 60 YSKIEAGRFDPEPQPMSVREIADNIIELLAARAFAKDIGLGCHVEPDVPQLITADPGRVR 119 Query: 449 RVLENLIGNAVRYTDAGRVLVEVDR----SSDQLAIRIKDTGIGIPAGQLDTIFEKFTQA 504 +VL NLIGNA+++TD G VLV + R +SD++ I DTG G+ ++ IFE+F QA Sbjct: 120 QVLLNLIGNAIKFTDGGGVLVSIARARSETSDRICFTITDTGPGLREEDMERIFEEFEQA 179 Query: 505 DDSERRAKDGAGLGLTIAQRLVTLMGGQLMLQSKQHQGSTFSFTLPLQE 553 D + RA GAGLGL I++RLV MGG + + S+ QGS F F +P E Sbjct: 180 DGTSTRAHGGAGLGLAISKRLVAAMGGTISVSSRLGQGSEFVFEIPATE 228 >VC2453_1 [T] COG0642 Signal transduction histidine kinase Vch Vibrio cholerae Length = 516 Score = 171 bits (433), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 93/238 (39%), Positives = 147/238 (61%), Gaps = 7/238 (2%) Query: 320 SRQEAMQASQAKSRFLSNMSHEFRTPLNGVLGYS-DALREELGESPLAQYATAIHDSGNR 378 +++ A +A++ KS FL+NMSHE RTPLNGV+G++ L+ +L S A Y I S N Sbjct: 280 AKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQ-ADYLQTIEKSANN 338 Query: 379 LLELVESILEVTALEDRRVAVHREPENIRELVSQAIARHYQAAQTKGLQLECRISDDVPQ 438 LL ++ IL+ + LE ++A+ P +E++ + + +A KGL++ +I +P+ Sbjct: 339 LLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPR 398 Query: 439 IIVCDQRKVLRVLENLIGNAVRYTDAGRVLVEVDRSSDQ-----LAIRIKDTGIGIPAGQ 493 +V D ++ +VL NL+GN++++T+ G + V V+ + + L ++DTGIGI Q Sbjct: 399 GVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQ 458 Query: 494 LDTIFEKFTQADDSERRAKDGAGLGLTIAQRLVTLMGGQLMLQSKQHQGSTFSFTLPL 551 +F+ F+QAD S R G GLGL I Q+LV+ MGG++ L S+ HQGSTF FTL L Sbjct: 459 QAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRL 516 >mll3725_2 [T] COG0642 Signal transduction histidine kinase Mlo Mesorhizobium loti Length = 328 Score = 171 bits (433), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 94/239 (39%), Positives = 142/239 (59%), Gaps = 4/239 (1%) Query: 317 LVRSRQEAMQASQAKSRFLSNMSHEFRTPLNGVLGYSDALREELGESPLAQYATAIHDSG 376 L +RQ A+ A +AKS FL+NMSHE RTP+NGVLG ++ L + + + I SG Sbjct: 72 LSEARQRAVLADRAKSEFLANMSHEIRTPMNGVLGMAELLAKSNLDPKQKTFTDIIVKSG 131 Query: 377 NRLLELVESILEVTALEDRRVAVHREPENIRELVSQAIARHYQAAQTKGLQLECRISDDV 436 N LL ++ IL+ + ++ ++ + P N+ E + A+ K L+L R+ + Sbjct: 132 NALLTIINDILDFSKIDAGQMVLDPAPFNLAEAIEDVATLVSTRAKEKDLELIVRVEPRL 191 Query: 437 PQIIVCDQRKVLRVLENLIGNAVRYTDAGRVLVEVD----RSSDQLAIRIKDTGIGIPAG 492 + V D ++ +++ NL+GNAV++TD G VLV+V + +L I + DTGIGIP Sbjct: 192 ESLFVGDVGRIRQIVTNLLGNAVKFTDEGHVLVDVTGERVPTGTRLTISVTDTGIGIPEE 251 Query: 493 QLDTIFEKFTQADDSERRAKDGAGLGLTIAQRLVTLMGGQLMLQSKQHQGSTFSFTLPL 551 +L +FEKF+Q D S R +G GLGL I RLV LMGG + ++S + +GSTF FT+ L Sbjct: 252 KLKLVFEKFSQVDTSSTRRHEGTGLGLAITSRLVELMGGTIGVESAEGKGSTFWFTVTL 310 >VCA0709_1 [T] COG0642 Signal transduction histidine kinase Vch Vibrio cholerae Length = 738 Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 96/235 (40%), Positives = 143/235 (60%), Gaps = 3/235 (1%) Query: 319 RSRQEAMQASQAKSRFLSNMSHEFRTPLNGVLGYSDALREELGESPLAQYATAIHDSGNR 378 ++RQ+A QAS+AKS FL+ MSHE RTP+NGVLG + L++ S Y I+ SG Sbjct: 494 KARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRS 553 Query: 379 LLELVESILEVTALEDRRVAVHREPENIRELVSQAIARHYQAAQTKGLQLECRISDDVPQ 438 LL ++ +L+ + +E + +H ++ LVS+ A+ KG+ L I +DV Q Sbjct: 554 LLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQ 613 Query: 439 IIVCDQRKVLRVLENLIGNAVRYTDAGRVLVEVDRSSDQLAIR--IKDTGIGIPAGQLDT 496 D+ ++ +VL NL+GN +++TD G V + + + D IR ++D+GIGI + T Sbjct: 614 YWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQGIRFAVEDSGIGIAEEEQAT 673 Query: 497 IFEKFTQADDSERRAKDGAGLGLTIAQRLVTLMGGQLMLQSKQHQGSTFSFTLPL 551 +F+ FTQA D+ RR G GLGL I+++LV MGG+L L S+ QGS F FTLPL Sbjct: 674 LFDAFTQA-DAGRRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPL 727 >mlr3786_1 [T] COG0642 Signal transduction histidine kinase Mlo Mesorhizobium loti Length = 478 Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/233 (39%), Positives = 137/233 (58%), Gaps = 4/233 (1%) Query: 323 EAMQASQAKSRFLSNMSHEFRTPLNGVLGYSDALREELGESPLAQYATAIHDSGNRLLEL 382 +A A +AKS FL+NMSHE RTP+NGVLG ++ L + + I SGN LL + Sbjct: 231 KAEAADRAKSEFLANMSHEIRTPMNGVLGMAELLAKTELTPRQKTFTDVIVKSGNALLTI 290 Query: 383 VESILEVTALEDRRVAVHREPENIRELVSQAIARHYQAAQTKGLQLECRISDDVPQIIVC 442 + IL+ + + ++ + P + E V K L+L R+ +P +V Sbjct: 291 INDILDFSKINAGQLTLDPAPFRLTEAVEDVATLVSARVAEKNLELIVRVDPRLPAHVVG 350 Query: 443 DQRKVLRVLENLIGNAVRYTDAGRVLVEV--DRSSD--QLAIRIKDTGIGIPAGQLDTIF 498 D + +++ NL+GNAV++T+ G VL++V + +D QL +R++DTGIGIPA +L +F Sbjct: 351 DAGRFRQIVTNLVGNAVKFTEKGHVLIDVGGETVNDVVQLRLRVEDTGIGIPAEKLQNVF 410 Query: 499 EKFTQADDSERRAKDGAGLGLTIAQRLVTLMGGQLMLQSKQHQGSTFSFTLPL 551 EKF Q D S R +G GLGL IA RLV LM G++ ++S+ +GS F F +PL Sbjct: 411 EKFAQVDGSSTRRHEGTGLGLAIAARLVDLMAGKIGVESEIGRGSVFWFAVPL 463