BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0203.p         (203 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1224_1 [T] COG2202 FOG Rso Ralstonia solanacearum                  157   1e-38
RSp0255_1 [T] COG2202 FOG Rso Ralstonia solanacearum                  156   3e-38
VC0512_1 [T] COG2202 FOG Vch Vibrio cholerae                          153   3e-37
PA1561_1 [T] COG2202 FOG Pae Pseudomonas aeruginosa                   153   3e-37
YPO1644_1 [T] COG2202 FOG Ype Yersinia pestis                         152   5e-37

>RSp1224_1 [T] COG2202 FOG Rso Ralstonia solanacearum
          Length = 133

 Score =  157 bits (398), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 72/120 (60%), Positives = 88/120 (73%)

Query: 1   MRLNLPVTQQEREIEAYASIVSKTDIKGRITYVNPTFIHISGFTEEELIGAPQNIVRHPD 60
           MR+N PVTQ+E E    A+++S TD +  I Y N  F+ +SGF+ EE+ G P NIVRHPD
Sbjct: 1   MRVNEPVTQREYEFPDNATLMSTTDTQSYIAYANAAFVDVSGFSREEIEGQPHNIVRHPD 60

Query: 61  MPELAFADLWSTLKAGLPWTGLVKNRCKNGDFYWVKANVTPIWERGKCTGYMSVRTKPTR 120
           MP  AFAD+W+TLK G PW+ LVKNR KNGD YWV+AN TP+   G+  GYMSVRTKPTR
Sbjct: 61  MPPEAFADMWATLKGGEPWSALVKNRRKNGDHYWVRANATPVVRNGRPAGYMSVRTKPTR 120


>RSp0255_1 [T] COG2202 FOG Rso Ralstonia solanacearum
          Length = 227

 Score =  156 bits (395), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 87/119 (73%)

Query: 1   MRLNLPVTQQEREIEAYASIVSKTDIKGRITYVNPTFIHISGFTEEELIGAPQNIVRHPD 60
           MR NLPVT  E  +     ++S+TD  GRI + NP F+ ISGFTE ELIGAP N+VRHPD
Sbjct: 1   MRNNLPVTDAETTLAPADYLISRTDPAGRIVFANPAFVRISGFTEAELIGAPHNVVRHPD 60

Query: 61  MPELAFADLWSTLKAGLPWTGLVKNRCKNGDFYWVKANVTPIWERGKCTGYMSVRTKPT 119
           MPE AFADLW+TL++G  W GLVKNR K+G FYWV+ANVTP+ + G   GY SVR+  T
Sbjct: 61  MPEAAFADLWATLRSGQSWRGLVKNRRKDGGFYWVQANVTPVLQDGAIAGYTSVRSMAT 119


>VC0512_1 [T] COG2202 FOG Vch Vibrio cholerae
          Length = 130

 Score =  153 bits (386), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 73/118 (61%), Positives = 82/118 (69%)

Query: 1   MRLNLPVTQQEREIEAYASIVSKTDIKGRITYVNPTFIHISGFTEEELIGAPQNIVRHPD 60
           MR NLPVT    E+ +  +I+S T     ITYVNP F+ ISGF EEELIG P N+VRHPD
Sbjct: 5   MRKNLPVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPD 64

Query: 61  MPELAFADLWSTLKAGLPWTGLVKNRCKNGDFYWVKANVTPIWERGKCTGYMSVRTKP 118
           MP  AFA +WSTLK+G  W GLVKNRCKNGD YWV A   PI + GK   Y SVRTKP
Sbjct: 65  MPPAAFAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKP 122


>PA1561_1 [T] COG2202 FOG Pae Pseudomonas aeruginosa
          Length = 195

 Score =  153 bits (386), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 76/139 (54%), Positives = 95/139 (68%), Gaps = 1/139 (0%)

Query: 1   MRLNLPVTQQEREIEAYASIVSKTDIKGRITYVNPTFIHISGFTEEELIGAPQNIVRHPD 60
           MR N P+TQ ER   A   +++ T++KG ITY N  FI ISGF+ EEL+ AP N++RHPD
Sbjct: 1   MRNNQPITQHERVYPAEQRLITTTNLKGIITYCNEAFIDISGFSREELMSAPHNLIRHPD 60

Query: 61  MPELAFADLWSTLKAGLPWTGLVKNRCKNGDFYWVKANVTPIWERGKCTGYMSVRTKPTR 120
           +P   FA +W+TLKAG PW G+VKNRCKNGD YWV A VTPI+++G   GY SVR KPT 
Sbjct: 61  VPPAVFAHMWTTLKAGRPWMGIVKNRCKNGDHYWVSAYVTPIYDQGAVVGYESVRVKPTA 120

Query: 121 TXTRSPFSKGRRHLCAGLP 139
              +   +  RR L AG P
Sbjct: 121 EQIQRAEALYRR-LGAGKP 138


>YPO1644_1 [T] COG2202 FOG Ype Yersinia pestis
          Length = 127

 Score =  152 bits (384), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 86/124 (69%)

Query: 1   MRLNLPVTQQEREIEAYASIVSKTDIKGRITYVNPTFIHISGFTEEELIGAPQNIVRHPD 60
           MR+N PV++QE  IE   ++ S TDI G I Y N  F+  SGF  +EL G P N+VRHPD
Sbjct: 1   MRVNKPVSRQEYPIERDITLQSTTDIHGNIAYANAAFVRASGFEYQELQGQPHNMVRHPD 60

Query: 61  MPELAFADLWSTLKAGLPWTGLVKNRCKNGDFYWVKANVTPIWERGKCTGYMSVRTKPTR 120
           MP  AFAD+W TL AGL W+ LVKNR KNGD+YWV+AN TP+   G+ TGY+SVR  PTR
Sbjct: 61  MPPAAFADMWQTLNAGLSWSSLVKNRRKNGDYYWVRANATPLRHNGRLTGYISVRIAPTR 120

Query: 121 TXTR 124
              +
Sbjct: 121 DEVK 124