BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0193.p         (240 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DR2498 [T] COG2199 FOG Dra Deinococcus radiodurans                    125   1e-28
STM1987_2 [T] COG2199 FOG Sty Salmonella typhimurium LT2              117   3e-26
yedQ_2 [T] COG2199 FOG Eco Escherichia coli K12                       114   3e-25
ECs2694_2 [T] COG2199 FOG Ecs Escherichia coli O157:H7                113   3e-25
Z3047_2 [T] COG2199 FOG EcZ Escherichia coli O157:H7 EDL933           112   8e-25

>DR2498 [T] COG2199 FOG Dra Deinococcus radiodurans
          Length = 356

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 100/167 (59%), Gaps = 9/167 (5%)

Query: 71  QQLSDELDYKARHDNLTGALNRGAVFEQAHQIL-----QQSPMSLVVLDIDFFKRINDEF 125
           +Q S EL   AR D LTG   R A+  +  + L       SP+S+++ DID FK++ND  
Sbjct: 193 EQTSGELQ-AARLDALTGVAGRAALESELQRALDTARRTNSPLSVILADIDHFKQVNDVH 251

Query: 126 GHPAGDAVIRELVARLRTTLAGNGVIGRVGGEEFTILLSGVALEQAVILAGRIRQAIAGD 185
           GH AGD V+R    RLR  + G G++GR GGEEF  +L GVA + A+ LA R+RQA++  
Sbjct: 252 GHGAGDDVLRAFAKRLRRNVGGAGMVGRWGGEEFMAVLPGVARDDALALAERLRQAVSDT 311

Query: 186 RFQCLPARPVTSSFGVAWAAAGSDFEEAYARADQALYQAKRGGRNRV 232
               L   PVT+SFGVA      D  + ++RAD+ LY AK GGRN V
Sbjct: 312 EIAGL---PVTASFGVAALRPDDDLNQLFSRADERLYDAKNGGRNTV 355


>STM1987_2 [T] COG2199 FOG Sty Salmonella typhimurium LT2
          Length = 180

 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 99/167 (59%), Gaps = 9/167 (5%)

Query: 75  DELDYKARHDNLTGALNRGAVFEQAHQILQQ-----SPMSLVVLDIDFFKRINDEFGHPA 129
           + L ++A HD LT   NRGA+FE+A ++ ++      P S++ LD+D+FK +ND FGH A
Sbjct: 2   NSLQWQAWHDPLTRLYNRGALFEKASRLAKRYREARQPFSVIQLDLDYFKSVNDRFGHQA 61

Query: 130 GDAVIRELVARLRTTLAGNGVIGRVGGEEFTILLSGVALEQAVILAGRIRQAIAGDRFQC 189
           GD V+      + +T+  + + GRVGGEEF I+L G    QA+ +A RIRQ I       
Sbjct: 62  GDRVLSHAAGLIGSTIRAHDIAGRVGGEEFCIVLPGATKAQALQIAERIRQRINDKEILV 121

Query: 190 LPARP--VTSSFGVAWAA--AGSDFEEAYARADQALYQAKRGGRNRV 232
             +    +++S G++ A      DFE+  + AD+ LY AK+ GRNR+
Sbjct: 122 TKSTTLRISASMGISSAEEYGDYDFEQLQSLADKRLYYAKQSGRNRI 168


>yedQ_2 [T] COG2199 FOG Eco Escherichia coli K12
          Length = 179

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 98/171 (57%), Gaps = 13/171 (7%)

Query: 73  LSDELDYKARHDNLTGALNRGAVFEQAHQI-----LQQSPMSLVVLDIDFFKRINDEFGH 127
           L   L ++A HD LT   NRGA+FE+A  +       Q P S++ +D+D FK IND FGH
Sbjct: 5   LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 64

Query: 128 PAGDAVIRELVARLRTTLAGNGVIGRVGGEEFTILLSGVALEQAVILAGRIRQAIAGDRF 187
            AGD V+      + ++L    V GRVGGEEF ++L G +L +A  +A RIR  +  +  
Sbjct: 65  QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL--NEK 122

Query: 188 QCLPARPVT----SSFGVAWA--AAGSDFEEAYARADQALYQAKRGGRNRV 232
           + L A+  T    +S GV+ +      DFE+  + AD+ LY AK+ GRNRV
Sbjct: 123 EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 173


>ECs2694_2 [T] COG2199 FOG Ecs Escherichia coli O157:H7
          Length = 178

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 99/171 (57%), Gaps = 13/171 (7%)

Query: 73  LSDELDYKARHDNLTGALNRGAVFEQAHQILQ-----QSPMSLVVLDIDFFKRINDEFGH 127
           L   L ++A HD LT   NRGA+FE+A  + +     Q P S++ +D+D FK IND FGH
Sbjct: 4   LQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGH 63

Query: 128 PAGDAVIRELVARLRTTLAGNGVIGRVGGEEFTILLSGVALEQAVILAGRIRQAIAGDRF 187
            AGD V+      + ++L    V GRVGGEEF ++L G +L +A  +A RIR  +  +  
Sbjct: 64  QAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL--NEK 121

Query: 188 QCLPARPVT----SSFGVAWA--AAGSDFEEAYARADQALYQAKRGGRNRV 232
           + L A+  T    +S GV+ +      DFE+  + AD+ LY AK+ GRNRV
Sbjct: 122 EMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 172


>Z3047_2 [T] COG2199 FOG EcZ Escherichia coli O157:H7 EDL933
          Length = 174

 Score =  112 bits (280), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 13/167 (7%)

Query: 77  LDYKARHDNLTGALNRGAVFEQAHQI-----LQQSPMSLVVLDIDFFKRINDEFGHPAGD 131
           L ++A HB LT   NRGA+FE+A  +       Q P S++ +D+D FK IND FGH AGD
Sbjct: 4   LQWQAWHBTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGD 63

Query: 132 AVIRELVARLRTTLAGNGVIGRVGGEEFTILLSGVALEQAVILAGRIRQAIAGDRFQCLP 191
            V+      + ++L    V GRVGGEEF ++L G +L +A  +A RIR  +  +  + L 
Sbjct: 64  RVLSHAAGLIXSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKL--NEKEMLI 121

Query: 192 ARPVT----SSFGVAWA--AAGSDFEEAYARADQALYQAKRGGRNRV 232
           A+  T    +S GV+ +      DFE+  + AD+ LY AK+ GRNRV
Sbjct: 122 AKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRV 168