BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0165.p (1312 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0077 [S] COG3523 Uncharacterized protein conserved in bacteria... 182 4e-45 AGl1062 [S] COG3523 Uncharacterized protein conserved in bacteri... 161 8e-39 mlr2360 Non COG 155 7e-37 RSp0763 [S] COG3523 Uncharacterized protein conserved in bacteri... 151 1e-35 mlr2349 Non COG 144 1e-33 >PA0077 [S] COG3523 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 1101 Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 140/417 (33%), Positives = 209/417 (50%), Gaps = 27/417 (6%) Query: 52 MRSRSKLAQQDVATRSSVAQAASPEALLRRKWKEAVATLR----GSSLRRRGNPLYVLPW 107 M+S ++++ D A+ ++ + A+ L+++ EA+A L+ G S RR LY LPW Sbjct: 1 MQSLAEVSAPDAASVATAEELAT----LKQRMDEALALLKRAKLGGSERRN---LYELPW 53 Query: 108 YIVVGKSGTGKTTALTRARLSSPIQRVRQSGPVEQ---TQNYDWWYFDQAVVIDSAGRYV 164 Y+++G G+GKTTAL + L P+ +G + T+N DWW+ D+AV++D+AGRY Sbjct: 54 YVIIGPPGSGKTTALMNSGLDFPLAAQMGAGAIRGVGGTRNCDWWFTDEAVLLDTAGRYT 113 Query: 165 DAQDSEA--DRREWELGLDLLARYRPREGIDGLVLAIGTDRLANVSRDELAEEGRVVRAR 222 QDS A D+ W LDLL R R IDG +AI L S E A + +RAR Sbjct: 114 -TQDSHAQVDKAAWLGFLDLLKTQRKRRPIDGAFIAISLSDLLLGSDAERAAHAQAIRAR 172 Query: 223 IEQLIQMFGKRFPIYVLVTKCDQLYGMEEWAKRMPENTLEQAMGYLSDEIVGDRSAAQFL 282 I++L Q G RFPIYV++TK D + G E+ + N E+A + + D +A+ Sbjct: 173 IQELYQQLGVRFPIYVMLTKFDLVPGFMEFFDSL--NREERAQVWGMTFALDDGKSAEGP 230 Query: 283 QGAFDSIGARLQQ-LRIALVARMAGAAGEAASPELLLFPNELQNLRPKLELFLNACLADN 341 FDS A L+Q L LV R+ A + FP + LR L FLN N Sbjct: 231 LAVFDSEFALLEQRLTARLVERLQQERDPARRDLVYGFPQQFAALRECLGEFLNGVFKPN 290 Query: 342 PYLERPFLRGLFFSSGLQEGGAVSSLLGQVLPP-------VASHPNTHAGLFLHDFFGRI 394 PY ERP LRGL+F+SG QEG + L+G + +A T F+ F + Sbjct: 291 PYEERPLLRGLYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIERLFREV 350 Query: 395 LPQDRFVSRPAELVNRWRQVTRNLGVVAWILIASAVGIMITVSFVSNMETLSLVREK 451 +R + V R R+ + A L+ AV + S+ +N ++ V ++ Sbjct: 351 AFGERGLVGTNPKVERRRKWLTIGALSATALVVLAVTAVWIASYRANQSYIAAVDQR 407 >AGl1062 [S] COG3523 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 1159 Score = 161 bits (408), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 135/459 (29%), Positives = 219/459 (47%), Gaps = 33/459 (7%) Query: 1 LLWLV-LLVLLALGCWGAALYMAWPLWVALA--LFCGVIGVYFLSKFLRRVYIVMRSRSK 57 LLW++ L V++ + AL PL A + G+I +L + +Y + + Sbjct: 28 LLWVIALCVVVWFYGYLIALGDFKPLGTVQARLIAIGIIVAVWLVYIIVTIYRGRKQDKE 87 Query: 58 LAQQDVATRSSVAQAASPEALLRRKWKEAVATLRGSSLRRRGNPLYVLPWYIVVGKSGTG 117 L D R ++A + ++ + KEA+A LR + +R G +Y LPWY++ G G+G Sbjct: 88 LV--DSIEREALANRQAEIGEIQTRLKEALALLRRVTKKRFGY-IYDLPWYVIFGAPGSG 144 Query: 118 KTTALTRARLSSPIQRVRQSGPVEQ---TQNYDWWYFDQAVVIDSAGRYVDAQDSEADRR 174 KTTALT + L P+ V+ T+N +WW+ D+A++ID+AGRY D + + Sbjct: 145 KTTALTNSGLQFPLGDALGENAVKGIGGTRNCNWWFADEAILIDTAGRYTTQDDLDGSSK 204 Query: 175 E-WELGLDLLARYRPREGIDGLVLAIGTDRLANVSRDELAEEGRVVRARIEQLIQMFGKR 233 WE L LL RYR + I+G ++ + L N +E +E R +R R+ +L + R Sbjct: 205 AGWEGFLGLLRRYRRSQPINGALVTLSIPDLLNRDPEEQRQELRSIRQRLSELDEYLHAR 264 Query: 234 FPIYVLVTKCDQLYGMEEWAKRMPENTLEQAMG--YLSDEIVGDRSAAQFLQGAFDSIGA 291 P+Y+++TK D L+G E+ + +Q G + DE + Q L F+ + Sbjct: 265 VPVYIVLTKADLLHGFVEFFDGFNKTDRQQVWGTTFKLDESYSAENLPQRLTEEFELLQQ 324 Query: 292 RLQQLRIALVARMAGAAGEAASPELLLFPNELQNLRPKLELFLNACLADNPYLERPFLRG 351 R+ + L+ R+ + FP EL L+ +L L A +P +E P LRG Sbjct: 325 RVDAM---LIERLQQEQNAEIRGRIFRFPAELARLKDRLHEALAELCASSPLIEAPLLRG 381 Query: 352 LFFSSGLQEGGAVSSLLGQVLPPVASHPNTHAGLFLHDFFGR-ILPQDRFVSRPAELVNR 410 ++F+SG Q S P AS T FL F I P+ V+R L R Sbjct: 382 VYFASGTQPETEKS--------PAASR--TRRSYFLSRLFKDVIFPEAALVTRDKRLSRR 431 Query: 411 WRQVTRNLGVVAWILIASAVGIMIT---VSFVSNMETLS 446 V R +A+ + A+AV I+ T ++ +N + L+ Sbjct: 432 QLLVRR----IAYAVSATAVAIVFTGWIFTYFANTQALA 466 >mlr2360 Non COG Length = 1176 Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 123/426 (28%), Positives = 197/426 (46%), Gaps = 39/426 (9%) Query: 3 WLV-LLVLLALGCWGAALYMAWPL------------WV---ALALFCGVIGVYFLSKFLR 46 W++ + +LAL + AA++ A PL W+ + L V+ +++ F + Sbjct: 3 WMLRIFSVLALAGFSAAVWYAGPLLRFADTRPLGSVWLRALIIGLTVAVLALFYGIGFWQ 62 Query: 47 RVYIVMRSRSKLAQQDVATRSSVAQAASPEALLRRKWKEAVATLRGSSLRRRGNPLYVLP 106 R + + + D R+ AQ +L + EA+ATL+ +S +R N LY +P Sbjct: 63 RRKAQKALEAAIVRSD--ERNDDAQ------VLEARMSEAIATLKRTSGKR--NFLYDIP 112 Query: 107 WYIVVGKSGTGKTTALTRARLSSPIQRVRQSGPVEQ---TQNYDWWYFDQAVVIDSAGRY 163 WYI++G G GKTTAL + L P+ + PV T++ DWW+ D+AV+ID+AGRY Sbjct: 113 WYIIIGPPGAGKTTALVNSGLKFPLAGSGNAQPVAGVGGTRSCDWWFTDEAVLIDTAGRY 172 Query: 164 VDAQ-DSEADRREWELGLDLLARYRPREGIDGLVLAIGTDRLANVSRDELAEEGRVVRAR 222 + D E D+ W L LL + R R+ I+G++LAI L + + +R+R Sbjct: 173 TTQESDRERDKASWLAFLGLLKKNRVRQPINGVILAISLADLIGLDDQHIEAHVTEIRSR 232 Query: 223 IEQLIQMFGKRFPIYVLVTKCDQLYGMEEWAKRMPENTLEQAMGYLSDEIVGDRSAAQFL 282 + +L + +FP+Y+L TK D + G ++ + E + G R+ A Sbjct: 233 LRELHETLKIQFPVYLLFTKADLVSGFMDYFGQFDEARRRKVWGATFQTADRTRNMAGEA 292 Query: 283 QGAFDSIGARLQQLRIALVARMAGAAGEAASPELLLFPNELQNLRPKLELFLNACLADNP 342 FD + RL + R+ A A + FP + LR ++ F+ + + Sbjct: 293 PAEFDGLAKRLAD---EIADRLQEEADPVARIAIFGFPAQFGALRNRIAHFIASLFDASR 349 Query: 343 YLERPFLRGLFFSSGLQEGGAVSSLLGQVLPPVASHPNTH-----AGLFLHDFFGR-ILP 396 LRGL+FSSG QEG +LG + S H FLHD I P Sbjct: 350 SQVNVSLRGLYFSSGTQEGTPFDQVLGAIGRSFGSTSQAHFSGTGKSFFLHDLLTNVIFP 409 Query: 397 QDRFVS 402 + +VS Sbjct: 410 ESGWVS 415 >RSp0763 [S] COG3523 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 1313 Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 107/338 (31%), Positives = 165/338 (48%), Gaps = 26/338 (7%) Query: 79 LRRKWKEAVATLRGSSLRRRGN--PLYVLPWYIVVGKSGTGKTTALTRARLSSPIQRVRQ 136 LR + EAV T++ S L + LY LPWYIV+G GK+TA+ + L P + Sbjct: 92 LRVRLAEAVKTIKRSKLGQLSGDAALYELPWYIVIGNPAAGKSTAVLNSGLQFPF--ADK 149 Query: 137 SGPVEQ----TQNYDWWYFDQAVVIDSAGRYVDAQDSEADRREWELGLDLLARYRPREGI 192 G V Q T+N DW++ + +++D+AGRY E DRREW LDLL RYRP+ I Sbjct: 150 GGAVIQGIGGTRNCDWFFTTEGILLDTAGRY---SVHEEDRREWLGFLDLLKRYRPKAPI 206 Query: 193 DGLVLAIGTDRLANVSRDELA-EEGRVVRARIEQLIQMFGKRFPIYVLVTKCDQLYGMEE 251 +G+V+ + L +R E A + +R R+++L + P+YV+ TK D + G E Sbjct: 207 NGIVVTVSVSELTQ-NRPEFAINLAKNLRQRVQELTERLEVFAPVYVMFTKADLITGFTE 265 Query: 252 WAKRMPENTLEQAMG-YLSDEIVGDRSAAQFLQGAFDSIGARLQQLRIALVARMAGAAGE 310 + + ++ G L E A FD + L+++ VA+++ Sbjct: 266 FFGDSEKQERDRVWGASLPFEPDAKPDVAALFDQRFDELCDGLKEIS---VAQISLHQKN 322 Query: 311 AASPELLLFPNELQNLRPKLELFLNACLADNPYLERPFLRGLFFSSGLQEGGAVSSLLGQ 370 SP LL FP E +++P L FL +NP+ +P RG +F+S LQEG S+ + Sbjct: 323 KLSPGLLSFPLEFASIKPALRAFLVTLFDENPFQYKPVFRGFYFTSALQEGATNSASAER 382 Query: 371 VLPPVASHPNTHA---------GLFLHDFFGRILPQDR 399 + + A G FL D F +++ DR Sbjct: 383 IARRFGLSTDGAARSREVFSKNGFFLRDLFSKVIFSDR 420 >mlr2349 Non COG Length = 1180 Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/323 (30%), Positives = 163/323 (50%), Gaps = 16/323 (4%) Query: 82 KWKEAVATLRGSSLRRRGNPLYVLPWYIVVGKSGTGKTTALTRARLSSPIQRVRQSGPVE 141 K+ E +A L+ L R L +PWY++VG TGKTTAL ++ L+ PI V Sbjct: 105 KFGEVMAELKRRKLGGR-KFLREMPWYVIVGPPATGKTTALRQSGLNFPIDLTDDLQGVG 163 Query: 142 QTQNYDWWYFDQAVVIDSAGRYVDAQDS-EADRREWELGLDLLARYRPREGIDGLVLAIG 200 T+N DW++ + AV+ID+AGRYV + + D EW LDLL ++R R ++G+++A+ Sbjct: 164 GTRNCDWFFSENAVLIDTAGRYVQQESQPDVDAAEWLGFLDLLKKHRGRRALNGVIVALS 223 Query: 201 TDRLANVSRDELAEEGRVVRARIEQLIQMFGKRFPIYVLVTKCDQLYGMEEWAKRMPENT 260 D L+ + + GR +R R+ +L R P+Y+++TK D + G E + + + Sbjct: 224 IDALSE-GDEAIKAHGRKIRRRLAELNDRLEIRLPVYLMLTKADLIKGFEAFFGGLSTSA 282 Query: 261 LEQAMGYLSDEIVGDRSAAQFLQGAFDSIGARLQQLRIALVARMAGAAGEAASPELLLFP 320 EQ G + + R A ++ +G L++ LV R+ A+ E+ FP Sbjct: 283 REQVWG--TTFPLDARVNAGMIEAELARLGTELER---RLVPRLEDEDKLASRAEIFRFP 337 Query: 321 NELQNLRPKLELFLNACLADNPYLERPFLRGLFFSSGLQEGGAVSSLLGQV-----LPPV 375 +L +LR +++ + A ++ Y E +LRGL+ +S QEG + L + LPP Sbjct: 338 AQLASLRGPIQVLIEAMFGESRYEEAAWLRGLYLTSATQEGAPIDRLTAALSSSFGLPPR 397 Query: 376 ASHPNTHA---GLFLHDFFGRIL 395 + P FL + ++ Sbjct: 398 RAMPAARVEKRSFFLRNLLTEVI 420