BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0162.p (227 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGpT15 [TK] COG0745 Response regulators consisting of a CheY-lik... 189 4e-48 mlr2740 [TK] COG0745 Response regulators consisting of a CheY-li... 180 2e-45 BMEII0791 [TK] COG0745 Response regulators consisting of a CheY-... 171 1e-42 mlr1334 [TK] COG0745 Response regulators consisting of a CheY-li... 163 4e-40 PM1376 [TK] COG0745 Response regulators consisting of a CheY-lik... 152 6e-37 >AGpT15 [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 253 Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 108/229 (47%), Positives = 145/229 (63%), Gaps = 7/229 (3%) Query: 1 MRQLLVEYLAGHGLPADSAINAAEANAALAARSYDLVLLDLGLPDADGAELARLWRRESN 60 MR L+VEYL H + ++ + N L + + D+V++DL L DG E+ R +S+ Sbjct: 25 MRHLIVEYLTIHAFKVTAVADSKQFNRVLCSETVDVVVVDLNLGREDGLEIVRSLATKSD 84 Query: 61 MSIICVTG-RDEEADLVMGLELGADDYITKPFSLREVLARVRAVLRRTGQVAQTPVTRGK 119 + II ++G R EEAD V+ LELGA D+I KPF RE LAR+R LR VA+T K Sbjct: 85 VPIIIISGARLEEADKVIALELGATDFIAKPFGTREFLARIRVALRVRPSVART-----K 139 Query: 120 HPRAYQFAGWNLNLNTRRLTAPDQRSVALTNAEFNLLVVFLSAPGRIISREQLIEGTRAF 179 R++ FA W LNL RRL + + V LT EFNLLV FL P ++SREQL+ +R Sbjct: 140 DRRSFSFADWTLNLRRRRLISEEGSEVKLTAGEFNLLVAFLEKPRDVLSREQLLIASRVR 199 Query: 180 DD-VYDRAIDVQILRLRRKLEADPKNPALLRTERGAGYFLDTEIETLWG 227 ++ VYDR+IDV ILRLRRKLE DP P L++T RGAGYF D +++ +G Sbjct: 200 EEEVYDRSIDVLILRLRRKLEGDPTTPQLIKTARGAGYFFDADVDVSYG 248 >mlr2740 [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Mlo Mesorhizobium loti Length = 238 Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 101/217 (46%), Positives = 133/217 (61%), Gaps = 4/217 (1%) Query: 1 MRQLLVEYLAGHGLPADSAINAAEANAALAARSYDLVLLDLGLPDADGAELARLWRRESN 60 +R LL E+ GL A + E A L DL++LD+ LP G EL R R + + Sbjct: 16 IRDLLQEFFQKRGLHTSVAADGTEMEAVLRRAQVDLIVLDVMLPGKSGLELCRDLRAQYS 75 Query: 61 MSIICVTGRDEEADLVMGLELGADDYITKPFSLREVLARVRAVLRRTGQVAQTPVTRGKH 120 II +T E D V+GLE+GADDY+ KPF RE+LAR+RAVLRR G A P R Sbjct: 76 TPIIMLTAVTETTDRVVGLEMGADDYVPKPFDPRELLARIRAVLRRNG--AAEP-KRATA 132 Query: 121 PRAYQFAGWNLNLNTRRLTAPDQRSVALTNAEFNLLVVFLSAPGRIISREQLIEGTRAFD 180 + Y+FAGW ++ + RRLTAPD V LT AEFNLL F+ + R+++R+QLIE + Sbjct: 133 KQIYRFAGWTMDCSRRRLTAPDDVRVELTMAEFNLLQTFVKSAQRVLTRDQLIELSGGDS 192 Query: 181 DV-YDRAIDVQILRLRRKLEADPKNPALLRTERGAGY 216 D +DR+ID+ + RLRRK+E DPK P L+ T R GY Sbjct: 193 DYSFDRSIDILVSRLRRKMEDDPKTPKLILTVRSGGY 229 >BMEII0791 [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Bme Brucella melitensis Length = 238 Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 103/227 (45%), Positives = 137/227 (60%), Gaps = 10/227 (4%) Query: 1 MRQLLVEYLAGHGLPADSAINAAEANAALAARSYDLVLLDLGLPDADGAELARLWRRESN 60 +R LL E+L G+ A N E L+ DLV+LD+ LP G E+ + RR S Sbjct: 16 IRDLLHEFLKRRGMHVSIACNGDEMLDVLSRTPIDLVILDVMLPGKSGIEICQDVRRTSR 75 Query: 61 MSIICVTGRDEEADLVMGLELGADDYITKPFSLREVLARVRAVLRR--TGQVAQTPVTRG 118 + II +T + AD ++GLE+GADDYI KPF RE+LAR+RAVLRR + Q +T Sbjct: 76 VPIIMLTAIADAADKILGLEIGADDYIAKPFDPRELLARIRAVLRRFEGNRSPQRALT-- 133 Query: 119 KHPRAYQFAGWNLNLNTRRLTAPDQRSVALTNAEFNLLVVFLSAPGRIISREQLIE--GT 176 + Y+FAGW L+ RRLT+P V LT AEFNLL F+ + I+SR+QL+E G Sbjct: 134 ---QIYRFAGWTLDCARRRLTSPHDVRVELTTAEFNLLEAFVKSSQHILSRDQLMEMAGH 190 Query: 177 RAFDDVYDRAIDVQILRLRRKLEADPKNPALLRTERGAGYFLDTEIE 223 +A YDR++D+ I RLR+KLE DP P L+ T RG GY E+E Sbjct: 191 QAVYG-YDRSVDILISRLRKKLEDDPCAPKLILTIRGGGYQFGHEVE 236 >mlr1334 [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Mlo Mesorhizobium loti Length = 255 Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 91/222 (40%), Positives = 135/222 (60%), Gaps = 5/222 (2%) Query: 3 QLLVEYLAGHGLPADSAINAAEANAALAARSYDLVLLDLGLPDADGAELARLWRRESNMS 62 ++L E L +G+ + A N A NAAL + +DL++LD+ LP +G + R R +N+ Sbjct: 36 RMLGETLTENGMIVEIAGNGARMNAALRNQKFDLIVLDIMLPGENGLSICRRLRAHTNVP 95 Query: 63 IICVTGRDEEADLVMGLELGADDYITKPFSLREVLARVRAVLRRTGQVAQTPVTRGKHPR 122 I+ +T EE D + GLE+GADDY+TKPFS RE+ AR+RA+LRRT A P R + + Sbjct: 96 ILMLTALGEEIDRIFGLEIGADDYVTKPFSARELTARIRALLRRT---AYAPDERDR-TK 151 Query: 123 AYQFAGWNLNLNTRRLTAPDQRSVALTNAEFNLLVVFLSAPGRIISREQLIEGTRA-FDD 181 +F GW L+ R+L P VA T EF+LL+ F GR++SRE+L+ T A Sbjct: 152 VLRFNGWRLDPVRRQLHDPSNARVATTTHEFDLLLAFCRNAGRVLSREELLSVTHAGLAG 211 Query: 182 VYDRAIDVQILRLRRKLEADPKNPALLRTERGAGYFLDTEIE 223 +R++DV + R+R+K+E D ++P LL+T R GY +E Sbjct: 212 PIERSVDVHVSRIRQKIEKDARDPVLLKTVRLGGYIFTATVE 253 >PM1376 [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Pmu Pasteurella multocida Length = 243 Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 80/223 (35%), Positives = 127/223 (56%), Gaps = 5/223 (2%) Query: 3 QLLVEYLAGHGLPADSAINAAEANAALAAR-SYDLVLLDLGLPDADGAELARLWRRESNM 61 +LL + HG +A +A A L + + L+ LDL LPD +G L + + + Sbjct: 22 ELLTDIFEEHGYTVMTAQTGQQALALLQSTPHFSLIFLDLILPDVNGLILLQRLKSLTTA 81 Query: 62 SIICVTGRDEEADLVMGLELGADDYITKPFSLREVLARVRAVLRRTGQVAQTPVTRGKHP 121 +I ++G D E+D+V+GLE+GADDYI+KPF R V+AR + LRR P + Sbjct: 82 PVIMLSGLDSESDIVVGLEMGADDYISKPFYPRVVVARAKVALRRH---QPQPFSTSASH 138 Query: 122 RAYQFAGWNLNLNTRRLTAPDQRSVALTNAEFNLLVVFLSAPGRIISREQLIEGTRAFD- 180 + + F W L+ R+L +P + + LT E+ LL +S +++SRE+L+E T Sbjct: 139 QGFTFHHWVLDTQNRKLYSPQKVDIELTQGEYTLLHALVSHAQKVLSREKLLELTHTESL 198 Query: 181 DVYDRAIDVQILRLRRKLEADPKNPALLRTERGAGYFLDTEIE 223 +++DR +DV I+RLR+K+E +PK P ++T RG GY +E Sbjct: 199 EIFDRTVDVLIMRLRKKIEPNPKAPTYIQTVRGMGYLFAVAVE 241