BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0157.p         (105 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VCA0110 [S] COG3519 Uncharacterized protein conserved in bacteri...    78   4e-15
Z0260 [S] COG3519 Uncharacterized protein conserved in bacteria ...    70   2e-12
ECs0229 [S] COG3519 Uncharacterized protein conserved in bacteri...    70   2e-12
mlr2342 Non COG                                                        64   1e-10
YPO1485 [S] COG3519 Uncharacterized protein conserved in bacteri...    62   3e-10

>VCA0110 [S] COG3519 Uncharacterized protein conserved in bacteria Vch
           Vibrio cholerae
          Length = 589

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 1/104 (0%)

Query: 3   NRYYEDELNKLKGLAVEFAQNNPALAPMLSGSSADPDVERLLEGVAFLTGLTRQKLDDEF 62
           ++Y+ +EL  LK    EF + +P L+  L G + DPDVERLLEG AFLT   R+K++DEF
Sbjct: 4   DKYFREELAFLKEQGKEFTEIHPQLSRFLHGRTTDPDVERLLEGFAFLTARLREKVEDEF 63

Query: 63  PEFVQELANLLFXEARRRIPRICAGTGKP-FPVHAIRRIPRDRE 105
           PE    + N+L+    R IP +     +P   V   + IPR+ +
Sbjct: 64  PELTHSIINMLWPNYLRPIPSMSVVAFEPDKSVSEKQVIPRNTQ 107


>Z0260 [S] COG3519 Uncharacterized protein conserved in bacteria EcZ
          Escherichia coli O157:H7 EDL933
          Length = 616

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 46/73 (63%)

Query: 10 LNKLKGLAVEFAQNNPALAPMLSGSSADPDVERLLEGVAFLTGLTRQKLDDEFPEFVQEL 69
          L+ L+ L+   A   P LA  L+   ADPD+ERLLEGVAFLTG  RQK++DEFPE    L
Sbjct: 12 LDYLRQLSKLLATEKPHLARFLAEKDADPDIERLLEGVAFLTGNLRQKIEDEFPELTHGL 71

Query: 70 ANLLFXEARRRIP 82
            +L+    R +P
Sbjct: 72 IKMLWPNYLRPVP 84


>ECs0229 [S] COG3519 Uncharacterized protein conserved in bacteria Ecs
          Escherichia coli O157:H7
          Length = 616

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 46/73 (63%)

Query: 10 LNKLKGLAVEFAQNNPALAPMLSGSSADPDVERLLEGVAFLTGLTRQKLDDEFPEFVQEL 69
          L+ L+ L+   A   P LA  L+   ADPD+ERLLEGVAFLTG  RQK++DEFPE    L
Sbjct: 12 LDYLRQLSKLLATEKPHLARFLAEKDADPDIERLLEGVAFLTGNLRQKIEDEFPELTHGL 71

Query: 70 ANLLFXEARRRIP 82
            +L+    R +P
Sbjct: 72 IKMLWPNYLRPVP 84


>mlr2342 Non COG
          Length = 624

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 3/94 (3%)

Query: 1  MFNRYYEDELNKLKGLAVEFAQNNPALAPMLSGSSA---DPDVERLLEGVAFLTGLTRQK 57
          +F  YYE+EL  ++ LA EFA  +PA+A  LS  +    DP VERLL+GVAFL   TR K
Sbjct: 4  VFVEYYEEELTHIRALAAEFADMHPAVARNLSLDTVPCPDPYVERLLDGVAFLAARTRLK 63

Query: 58 LDDEFPEFVQELANLLFXEARRRIPRICAGTGKP 91
          +D E   F + + ++L+ +     P       KP
Sbjct: 64 VDAERSRFSRAVLDVLYPDLVTPAPATAMAVLKP 97


>YPO1485 [S] COG3519 Uncharacterized protein conserved in bacteria Ype
          Yersinia pestis
          Length = 587

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 3/85 (3%)

Query: 4  RYYEDELNKLKGLAVEFAQNNPALAPMLSGSSA---DPDVERLLEGVAFLTGLTRQKLDD 60
          RY++ E+  L+    EFA+ +P  A  L+   A   DP VERL EG AFL G  R+KLDD
Sbjct: 7  RYFDAEMRYLREAGEEFARAHPDRAAGLNLDKAGARDPYVERLFEGFAFLMGRLREKLDD 66

Query: 61 EFPEFVQELANLLFXEARRRIPRIC 85
          + PE  + L +LL+    R IP + 
Sbjct: 67 DLPELTEGLVSLLWPHYLRTIPSLS 91