BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0153.p (435 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1710 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomeras... 559 e-159 NMA1526 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomeras... 449 e-126 NMB1313 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomeras... 447 e-125 PA1800 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase... 340 4e-93 VC1923 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase... 328 1e-89 >RSc1710 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Rso Ralstonia solanacearum Length = 449 Score = 559 bits (1441), Expect = e-159, Method: Compositional matrix adjust. Identities = 280/434 (64%), Positives = 342/434 (78%), Gaps = 3/434 (0%) Query: 1 MTLSFPLADVQAEVEKRLKVRARTAKAPGFRPGKVPMKMVAAQFGYQVETEVLNDKVGRA 60 +TL+ P A+V+ E + RL ++T K GFRPGKVPMKMV Q+G QVE EV DK R Sbjct: 15 VTLAVPKAEVEQEKQSRLARLSKTVKMSGFRPGKVPMKMVEKQYGQQVEMEVRFDKAARQ 74 Query: 61 FNDAAVENNLRVAGFPRIEPKTSEEAGEGKLAFDATFEVYPEVTLGDLSGAEVEKTTAAV 120 F D E ++VAG PR E K SE + + AFDATFEVYPEV +GDL+GAE+ +T + Sbjct: 75 FFDITNEQGVKVAGQPRFELK-SEGVADDQFAFDATFEVYPEVKIGDLAGAELTRTKTEI 133 Query: 121 SDAEIDKTIDILRKQRVHYHVKGEQGAHGDGGADQSAQNGDRVTVDFVGKIDGVEFQGGK 180 +DAEIDKTIDILRKQRVHYH +GE G HGDGG + AQNGDRVTVDFVG IDGVEF GGK Sbjct: 134 TDAEIDKTIDILRKQRVHYHPRGEAGDHGDGG-EAVAQNGDRVTVDFVGTIDGVEFAGGK 192 Query: 181 ADAFPFVLGEGRMLPEFEAATIGLKVGESKSFPLAFPEDYHGKDVAGKTAEFTITVKKIE 240 A+ F FVLGEGRMLPEFE AT+GLK GESK FPLAFP DYHGKDVAGKTAEFT+T+K++E Sbjct: 193 AEGFGFVLGEGRMLPEFEQATLGLKQGESKVFPLAFPADYHGKDVAGKTAEFTVTLKQVE 252 Query: 241 WAHMPEVDAVFAQSLGIEDGDLTKMREDIKKNLEREVTARTKAKTKDSVMNALIKASELD 300 WAH+PE++ FAQSLGI DG L KMR DI++NLEREV RT A KD VM+AL+K +ELD Sbjct: 253 WAHLPEINGAFAQSLGIADGSLDKMRADIRENLEREVKRRTHALLKDQVMDALLKVAELD 312 Query: 301 VPQALIDQDVERLSEMARQDMAQRGM-DPKVMQLPKELFTAQAERRVRLGLILAEVVKQN 359 VP++LI+QD ERL EMAR+D+ RGM + K M +P E+F QAERRV+LGL+LAEVVK N Sbjct: 313 VPKSLIEQDQERLVEMARRDLEARGMPNVKNMPIPAEMFAQQAERRVKLGLVLAEVVKVN 372 Query: 360 KLEATEEQVKAQIEDFAQSYEDPQQVLKYYFSDRRRLAEVEALVLEENVVNYVLGKAKVS 419 LEA EQ+KA+IE+FA+SYEDP++V+++Y+ D++RLAE+EA VLE NVVN+V KAKV+ Sbjct: 373 ALEAKPEQIKAEIEEFAKSYEDPKEVIRWYYGDQQRLAEMEAYVLENNVVNFVCDKAKVA 432 Query: 420 EKPVSFDELMGNQA 433 +K +SF+EL Q Sbjct: 433 DKAMSFEELTATQG 446 >NMA1526 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) NmA Neisseria meningitidis Z2491 Length = 437 Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust. Identities = 229/435 (52%), Positives = 306/435 (70%), Gaps = 15/435 (3%) Query: 1 MTLSFPLADVQAEVEKRLKVRARTAKAPGFRPGKVPMKMVAAQFGYQVETEVLNDKVGRA 60 + LS P +++ AE +K+LK R AK GFRPGK P+KM+A +G + +V+N+ V R Sbjct: 16 VVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGASAQNDVINELVQRR 75 Query: 61 FNDAAVENNLRVAGFPRIEPKTSEEAGEGKLAFDATFEVYPEVTLGDLSGAEVEKTTAAV 120 F+D AV L+VAGFPR E E+ + A FEV+PEV +GDLS EVEK TA+V Sbjct: 76 FHDVAVAQELKVAGFPRFE-GVEEQDDKESFKVAAIFEVFPEVVIGDLSAQEVEKVTASV 134 Query: 121 SDAEIDKTIDILRKQRVHY-HVKGEQGAHGDGGADQSAQNGDRVTVDFVGKIDGVEFQGG 179 DAE+D+T++ILRKQR + HV+ E A+NGDRV +DF GKIDG F GG Sbjct: 135 GDAEVDQTVEILRKQRTRFNHVERE------------ARNGDRVIIDFEGKIDGEPFAGG 182 Query: 180 KADAFPFVLGEGRMLPEFEAATIGLKVGESKSFPLAFPEDYHGKDVAGKTAEFTITVKKI 239 + + FVLG +MLPEFEA +G+K GESK + FPEDYHGKDVAGKTA FTIT+ + Sbjct: 183 ASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTAVFTITLNNV 242 Query: 240 EWAHMPEVDAVFAQSLGIEDGDLTKMREDIKKNLEREVTARTKAKTKDSVMNALIKASEL 299 A +PEVDA FA++LGI DGD+ KMRE++KKN+ REV R +TK+SVMNAL+KA EL Sbjct: 243 SEATLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVMNALLKAVEL 302 Query: 300 DVPQALIDQDVERLSEMARQDMAQRGM-DPKVMQLPKELFTAQAERRVRLGLILAEVVKQ 358 P AL++++ RL+ +Q+ +GM D + LP ++F QAERRV LGLILA++V + Sbjct: 303 KAPVALVNEEAARLANEMKQNFVNQGMADAANLDLPLDMFKEQAERRVSLGLILAKLVDE 362 Query: 359 NKLEATEEQVKAQIEDFAQSYEDPQQVLKYYFSDRRRLAEVEALVLEENVVNYVLGKAKV 418 NKLE TEEQ+KA + +FA+SYEDPQ+V+ +Y+++ RL +L +E NVV++VLGKAKV Sbjct: 363 NKLEPTEEQIKAVVANFAESYEDPQEVIDWYYAEPSRLQAPTSLAIESNVVDFVLGKAKV 422 Query: 419 SEKPVSFDELMGNQA 433 +EK +SFDE+MG QA Sbjct: 423 NEKALSFDEVMGAQA 437 >NMB1313 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Nme Neisseria meningitidis MC58 Length = 437 Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust. Identities = 229/435 (52%), Positives = 305/435 (70%), Gaps = 15/435 (3%) Query: 1 MTLSFPLADVQAEVEKRLKVRARTAKAPGFRPGKVPMKMVAAQFGYQVETEVLNDKVGRA 60 + LS P +++ AE +K+LK R AK GFRPGK P+KM+A +G + +V+N+ V R Sbjct: 16 VVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGASAQNDVINELVQRR 75 Query: 61 FNDAAVENNLRVAGFPRIEPKTSEEAGEGKLAFDATFEVYPEVTLGDLSGAEVEKTTAAV 120 F D AV L+VAGFPR E E+ + A FEV+PEV +GDLS EVEK TA+V Sbjct: 76 FYDVAVAQELKVAGFPRFE-GVEEQDDKESFKVAAIFEVFPEVVIGDLSAQEVEKVTASV 134 Query: 121 SDAEIDKTIDILRKQRVHY-HVKGEQGAHGDGGADQSAQNGDRVTVDFVGKIDGVEFQGG 179 DAE+D+T++ILRKQR + HV+ E A+NGDRV +DF GKIDG F GG Sbjct: 135 GDAEVDQTVEILRKQRTRFNHVERE------------ARNGDRVIIDFEGKIDGEPFAGG 182 Query: 180 KADAFPFVLGEGRMLPEFEAATIGLKVGESKSFPLAFPEDYHGKDVAGKTAEFTITVKKI 239 + + FVLG +MLPEFEA +G+K GESK + FPEDYHGKDVAGKTA FTIT+ + Sbjct: 183 ASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTAVFTITLNNV 242 Query: 240 EWAHMPEVDAVFAQSLGIEDGDLTKMREDIKKNLEREVTARTKAKTKDSVMNALIKASEL 299 A +PEVDA FA++LGI DGD+ KMRE+++KN+ REV R +TK+SVMNAL+KA EL Sbjct: 243 SEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVMNALLKAVEL 302 Query: 300 DVPQALIDQDVERLSEMARQDMAQRGM-DPKVMQLPKELFTAQAERRVRLGLILAEVVKQ 358 P AL++++ RL+ +Q+ +GM D + LP ++F QAERRV LGLILA++V + Sbjct: 303 KAPVALVNEEAARLANEMKQNFVNQGMADAANLDLPLDMFKEQAERRVSLGLILAKLVDE 362 Query: 359 NKLEATEEQVKAQIEDFAQSYEDPQQVLKYYFSDRRRLAEVEALVLEENVVNYVLGKAKV 418 NKLE TEEQ+KA + +FA+SYEDPQ+V+ +Y++D RL +L +E NVV++VLGKAKV Sbjct: 363 NKLEPTEEQIKAVVANFAESYEDPQEVIDWYYADPSRLQAPTSLAVESNVVDFVLGKAKV 422 Query: 419 SEKPVSFDELMGNQA 433 +EK +SFDE+MG QA Sbjct: 423 NEKALSFDEVMGAQA 437 >PA1800 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Pae Pseudomonas aeruginosa Length = 436 Score = 340 bits (872), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 186/427 (43%), Positives = 267/427 (62%), Gaps = 16/427 (3%) Query: 1 MTLSFPLADVQAEVEKRLKVRARTAKAPGFRPGKVPMKMVAAQFGYQVETEVLNDKVGRA 60 MT+ P ++ EV KRL+ AR AK PGFRPGKVPM ++ ++ E + D + Sbjct: 15 MTVGVPAERIETEVNKRLQQTARRAKIPGFRPGKVPMSVIRQRYEASARQEAMGDLIQET 74 Query: 61 FNDAAVENNLRVAGFPRIEPKTSEEAGEGKLAFDATFEVYPEVTLGDLSGAEVEKTTAAV 120 F +A VE L AG P +EPK+ E+ + L + ATFEV+PE T+ L +VE+ A V Sbjct: 75 FYEAVVEQKLNPAGSPSVEPKSFEKGKD--LEYIATFEVFPEFTVSGLEDIKVERLQAEV 132 Query: 121 SDAEIDKTIDILRKQRVHYHVKGEQGAHGDGGADQSAQNGDRVTVDFVGKIDGVEFQGGK 180 SDA++D +D+LRKQ + V +++AQN D++ +DFVGKIDG F GG Sbjct: 133 SDADVDNMLDVLRKQNTRFEV-----------VERAAQNDDQLNIDFVGKIDGEAFAGGS 181 Query: 181 ADAFPFVLGEGRMLPEFEAATIGLKVGESKSFPLAFPEDYHGKDVAGKTAEFTITVKKIE 240 A VLG GRM+ FE +G K GE + L FPEDY D+A K AEFT+TV + Sbjct: 182 AKGTLLVLGSGRMIAGFEEGLVGAKAGEERVLNLTFPEDYQNLDLANKAAEFTVTVNSVA 241 Query: 241 WAHMPEVDAVFAQSLGIEDGDLTKMREDIKKNLEREVTARTKAKTKDSVMNALIKASELD 300 +PE++ F G+++ L R +++KN+ERE+ K+K K+ VM L++A+ ++ Sbjct: 242 EPKLPELNEEFFALFGVKETGLDGFRAEVQKNMERELRQAIKSKVKNQVMEGLLQANPIE 301 Query: 301 VPQALIDQDVERLSEMARQDMAQRGMDPKVMQLPKELFTAQAERRVRLGLILAEVVKQNK 360 VP+ALI +V RL A Q Q G + K QLP ELF QA+RRV LGLI+AEVVKQ++ Sbjct: 302 VPKALIGNEVNRLRVQAVQ---QFGGNIKPDQLPAELFEEQAKRRVVLGLIVAEVVKQHE 358 Query: 361 LEATEEQVKAQIEDFAQSYEDPQQVLKYYFSDRRRLAEVEALVLEENVVNYVLGKAKVSE 420 L+A E +V+ IE+ A +Y++P+QV+ +YF + +L EV ++VLEE VV+ VL KA V++ Sbjct: 359 LKADEGRVREMIEEMASAYQEPEQVVAWYFKNEPQLNEVRSVVLEEQVVDTVLQKATVTD 418 Query: 421 KPVSFDE 427 K VS++E Sbjct: 419 KQVSYEE 425 >VC1923 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Vch Vibrio cholerae Length = 433 Score = 328 bits (841), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 180/432 (41%), Positives = 266/432 (61%), Gaps = 21/432 (4%) Query: 1 MTLSFPLADVQAEVEKRLKVRARTAKAPGFRPGKVPMKMVAAQFGYQVETEVLNDKVGRA 60 + ++ P A+++ V L+ A+ + GFR GKVPMKMVA +G V +VL + + R Sbjct: 15 LNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGKAVRQDVLGEVMQRH 74 Query: 61 FNDAAVENNLRVAGFPRIEPKTSEEAGEGK-LAFDATFEVYPEVTLGDLSGAEVEKTTAA 119 F +A V+ + AG P P E GEGK L F ATFEVYPEV L L VEK A Sbjct: 75 FIEAIVKEKINPAGAPTFAPV---EIGEGKDLVFTATFEVYPEVELKGLENIAVEKPAAE 131 Query: 120 VSDAEIDKTIDILRKQRVHYHVKGEQGAHGDGGADQSAQNGDRVTVDFVGKIDGVEFQGG 179 V+DA++ + ++ LRKQ+ + D++A+NG RV++DFVG IDGVEF+GG Sbjct: 132 VTDADVAEMLETLRKQQATWK-----------EVDEAAENGKRVSIDFVGSIDGVEFEGG 180 Query: 180 KADAFPFVLGEGRMLPEFEAATIGLKVGESKSFPLAFPEDYHGKDVAGKTAEFTITVKKI 239 KA+ FP +G GRM+P FE +G G + FPEDYH +++ GK A+F I V K+ Sbjct: 181 KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAAKFAIKVNKV 240 Query: 240 EWAHMPEVDAVFAQSLGIEDGDLTKMREDIKKNLEREVTARTKAKTKDSVMNALIKASEL 299 E +PE++ F G+ +G + ++ +++KN+ERE+ KA+ K+ + L+K +E+ Sbjct: 241 EARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAIEGLVKENEI 300 Query: 300 DVPQALIDQDVERLSEMARQDMAQR--GMDPKVMQLPKELFTAQAERRVRLGLILAEVVK 357 VP ALIDQ++ L RQ AQR G QLP+ELF QA+RRV +GL+L EV++ Sbjct: 301 QVPSALIDQEINVL----RQQAAQRFGGNVEAAAQLPRELFEEQAKRRVVVGLLLGEVIR 356 Query: 358 QNKLEATEEQVKAQIEDFAQSYEDPQQVLKYYFSDRRRLAEVEALVLEENVVNYVLGKAK 417 ++L+A EE+VKA I + A +YEDP +V+ YY +++ + + + LEE V+ ++ KAK Sbjct: 357 THELKADEEKVKALITEMATAYEDPSEVVSYYEQNQQLMNNMRNVALEEQAVDAIIAKAK 416 Query: 418 VSEKPVSFDELM 429 V+EK +SF ELM Sbjct: 417 VTEKAISFSELM 428