BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0106.p         (187 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XF2096 [S] COG1469 Uncharacterized conserved protein Xfa Xylella...   135   7e-32
PA5539 [S] COG1469 Uncharacterized conserved protein Pae Pseudom...   109   3e-24

>XF2096 [S] COG1469 Uncharacterized conserved protein Xfa Xylella
           fastidiosa 9a5c
          Length = 299

 Score =  135 bits (339), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/161 (47%), Positives = 101/161 (62%), Gaps = 4/161 (2%)

Query: 8   NSLPDVARDEPASIALPLQWVGMCGIALPLRL--ADGTQ-LPASAEVAVDLPDPQAKGIH 64
            S+PDVA  +  ++A PL+WVGM GI +P++L  ADG Q +   A   +DLP  + KGIH
Sbjct: 4   TSIPDVAVHDSPAVAAPLRWVGMDGIVVPVQLTTADGGQHVIGRARAQIDLPAMEVKGIH 63

Query: 65  MSRLYLLLDAFASRSRLTPTAAHELLRQMRESHADCQSRAALLRLDFALLQQRAALVTPE 124
           MSRLY LLD  A    LTP     LL  M  SHADC S AA +   F  L++  ALV+ +
Sbjct: 64  MSRLYRLLDTHAVEP-LTPVGICGLLSAMVNSHADCASTAARVDWHFDWLRRVPALVSND 122

Query: 125 LAGWKSYPVTLTAQLRDSTLEIRLQVRIAYSSTCPCSAALS 165
           L+GW+ YPV+L A+     ++  L V + YSSTCPCSAAL+
Sbjct: 123 LSGWRGYPVSLRAEYSAVHVQFWLCVEVGYSSTCPCSAALA 163


>PA5539 [S] COG1469 Uncharacterized conserved protein Pae Pseudomonas
           aeruginosa
          Length = 298

 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 101/157 (64%), Gaps = 5/157 (3%)

Query: 9   SLPDVARDEPASIALPLQWVGMCGIALPLRLADGTQLPASAEVAVDLPDPQAKGIHMSRL 68
           +LPD+AR +  +  LPL WVGM GIALP+++  G ++ A A+  V L DPQA+GIHMSRL
Sbjct: 5   TLPDIAR-QTTTADLPLDWVGMQGIALPVQIG-GQRVAAEADAGVSLDDPQARGIHMSRL 62

Query: 69  YLLLDAFASRSRLTPTAAHELLRQMRESHADCQSRAALLRLDFALLQQRAALVTPELAGW 128
           YL L A   +  L  +    +L++  +SHA   SR A LRL  A L +R ALV+P L+GW
Sbjct: 63  YLAL-AELEQGELDLSCLRAVLQRFLDSHAGL-SRRAYLRLRLAPLLRRPALVSP-LSGW 119

Query: 129 KSYPVTLTAQLRDSTLEIRLQVRIAYSSTCPCSAALS 165
           K YP+ L  +L     +  + + + YSSTCPCSAAL+
Sbjct: 120 KRYPLVLDTRLEGDDFQAEVHLELTYSSTCPCSAALA 156