BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0096.p         (87 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1283 [T] COG0664 cAMP-binding proteins - catabolite gene acti...    95   4e-20
RSc0190 [T] COG0664 cAMP-binding proteins - catabolite gene acti...    85   4e-17
NMB0380 [T] COG0664 cAMP-binding proteins - catabolite gene acti...    85   5e-17
NMA2107 [T] COG0664 cAMP-binding proteins - catabolite gene acti...    85   5e-17
HI1425 [T] COG0664 cAMP-binding proteins - catabolite gene activ...    84   6e-17

>RSc1283 [T] COG0664 cAMP-binding proteins - catabolite gene activator and
           regulatory subunit of cAMP-dependent protein kinases Rso
           Ralstonia solanacearum
          Length = 242

 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 63/83 (75%)

Query: 1   MTAQQKMAAFMLNLSSRYASRGYSSTRFQLRMTREEIGNHLGLAVESVSRLLTNFKKTGV 60
           M A++++AAF+LNLS R A RGYSST F LRM+REE+G++LGL +E+VSRL + F + G+
Sbjct: 158 MRAEERLAAFLLNLSRRSAERGYSSTEFVLRMSREELGSYLGLKLETVSRLFSRFAEAGL 217

Query: 61  IEVNHRDVELCDLPALRAIALGN 83
           I++  R V+L D+  LR +  G+
Sbjct: 218 IQIRQRHVKLIDMAGLRQVMTGH 240


>RSc0190 [T] COG0664 cAMP-binding proteins - catabolite gene activator and
           regulatory subunit of cAMP-dependent protein kinases Rso
           Ralstonia solanacearum
          Length = 266

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 57/76 (75%)

Query: 1   MTAQQKMAAFMLNLSSRYASRGYSSTRFQLRMTREEIGNHLGLAVESVSRLLTNFKKTGV 60
           +TA+ ++A F+LNLSSR   RGYS + F LRMTREEIG++LG+ +E+VSR L+ F++ G 
Sbjct: 188 LTAEARVATFLLNLSSRMQDRGYSGSCFTLRMTREEIGSYLGMQLETVSRALSRFQREGW 247

Query: 61  IEVNHRDVELCDLPAL 76
           I VN + +EL +  AL
Sbjct: 248 ISVNGKQIELANKAAL 263


>NMB0380 [T] COG0664 cAMP-binding proteins - catabolite gene activator and
           regulatory subunit of cAMP-dependent protein kinases Nme
           Neisseria meningitidis MC58
          Length = 244

 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 61/82 (74%)

Query: 1   MTAQQKMAAFMLNLSSRYASRGYSSTRFQLRMTREEIGNHLGLAVESVSRLLTNFKKTGV 60
           M A++++AAF+LNLS R  SRG+++  F LRM+REEIG++LGL +E+VSR L+ F + G+
Sbjct: 158 MRAEERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGL 217

Query: 61  IEVNHRDVELCDLPALRAIALG 82
           I V H+ +++ +L  L+ +  G
Sbjct: 218 ISVEHKHIKILNLQVLKKMVSG 239


>NMA2107 [T] COG0664 cAMP-binding proteins - catabolite gene activator and
           regulatory subunit of cAMP-dependent protein kinases NmA
           Neisseria meningitidis Z2491
          Length = 244

 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 61/82 (74%)

Query: 1   MTAQQKMAAFMLNLSSRYASRGYSSTRFQLRMTREEIGNHLGLAVESVSRLLTNFKKTGV 60
           M A++++AAF+LNLS R  SRG+++  F LRM+REEIG++LGL +E+VSR L+ F + G+
Sbjct: 158 MRAEERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGL 217

Query: 61  IEVNHRDVELCDLPALRAIALG 82
           I V H+ +++ +L  L+ +  G
Sbjct: 218 ISVEHKHIKILNLQVLKKMVSG 239


>HI1425 [T] COG0664 cAMP-binding proteins - catabolite gene activator and
           regulatory subunit of cAMP-dependent protein kinases Hin
           Haemophilus influenzae
          Length = 257

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 57/76 (75%)

Query: 1   MTAQQKMAAFMLNLSSRYASRGYSSTRFQLRMTREEIGNHLGLAVESVSRLLTNFKKTGV 60
           M A++++AAF+ NLS RY++RG+S+  F+L MTR +IGN+LGL VE++SRLL  F+K GV
Sbjct: 167 MNAEERLAAFIHNLSKRYSARGFSAREFRLTMTRGDIGNYLGLTVETISRLLGRFQKLGV 226

Query: 61  IEVNHRDVELCDLPAL 76
           I V  + + + DL  L
Sbjct: 227 ISVQGKYITINDLNGL 242