BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0091.p         (98 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1447 [K] COG1396 Predicted transcriptional regulators Rso Ral...    68   5e-12

>RSc1447 [K] COG1396 Predicted transcriptional regulators Rso Ralstonia
          solanacearum
          Length = 84

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/61 (57%), Positives = 44/61 (72%)

Query: 12 QLREHLRALRKQRHMTQAQLGERIGISQARIAEIEANPGAVSVEQMLLLLSTLGAGLKLH 71
          QL  HL++LRK R +TQAQLG  +G+SQ RIA+IE +PGAV  EQ+L +L  LGA L L 
Sbjct: 13 QLSAHLKSLRKARGLTQAQLGALLGVSQNRIADIEKDPGAVGFEQLLRILHALGAQLTLR 72

Query: 72 V 72
           
Sbjct: 73 T 73