BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0038.p (1035 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl1617_2 [T] COG0642 Signal transduction histidine kinase Atu A... 285 5e-76 mll8067_5 [T] COG0642 Signal transduction histidine kinase Mlo M... 281 4e-75 AGpA755_2 [T] COG0642 Signal transduction histidine kinase Atu A... 233 1e-60 SMa1142_2 [T] COG0642 Signal transduction histidine kinase Sme S... 227 1e-58 BMEI0947_2 [T] COG0642 Signal transduction histidine kinase Bme ... 224 7e-58 >AGl1617_2 [T] COG0642 Signal transduction histidine kinase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 249 Score = 285 bits (728), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 133/240 (55%), Positives = 178/240 (74%), Gaps = 3/240 (1%) Query: 654 AVGQLTGGVAHDFNNVLQIIGGNLQLLQTDPRLDDRSRQRVRIAIGAVDRGAKLSSQLLA 713 ++GQLTGGVAHDFNN+LQ+I GNLQLL D ++R+ +R+ A+ V RGAKL+SQLLA Sbjct: 1 SIGQLTGGVAHDFNNLLQVIAGNLQLLSKDVIGNERAERRLENALAGVHRGAKLASQLLA 60 Query: 714 FARRQPLQPRSINLERVVLNMDDLLRRAVGENIEISTVITHDLWNTMLDPNQVENLIINT 773 F RRQ L+PR IN+ R V MDDLLRR++GE IE+ + + LWNT DPNQVEN ++N Sbjct: 61 FGRRQALEPRVINIARFVTGMDDLLRRSLGEGIEVEVITSGGLWNTYADPNQVENALLNL 120 Query: 774 AINSRDAMPNGGRLTLQIDNVQLSDPAFLSQADLPPGDYVELQISDNGAGMSPEVRERAF 833 AIN+RDAM G+LT+++ N L +++ G YV L ++D G+GMSPE+ E+ F Sbjct: 121 AINARDAMEGHGKLTIEVGNAVLDRDYARKHSEVSAGQYVMLAVTDTGSGMSPEILEKVF 180 Query: 834 EPFFTTKREGEGTGLGLSMAYGFVKQSKGHISLHSEAGKGTTIRIYFPRCI---DQEVVI 890 EPFF+TK EG+GTGLGLSM YGF KQS GH++++SE G+GTT+++Y PR D+EVV+ Sbjct: 181 EPFFSTKPEGKGTGLGLSMVYGFAKQSSGHVNIYSEVGQGTTVKMYLPRSAADEDREVVM 240 >mll8067_5 [T] COG0642 Signal transduction histidine kinase Mlo Mesorhizobium loti Length = 297 Score = 281 bits (720), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 139/276 (50%), Positives = 196/276 (71%), Gaps = 6/276 (2%) Query: 610 DITERRRAEDALRELNDTLEQRVVEEILERSRAEAALRQMQKMEAVGQLTGGVAHDFNNV 669 +++ERRRAE AL+ LN TLEQRV++E+ ERS+AE LRQ+QKM+AVGQLTGG+AHDFNN+ Sbjct: 2 ELSERRRAEAALQTLNSTLEQRVIDEVAERSKAEEQLRQVQKMDAVGQLTGGIAHDFNNM 61 Query: 670 LQIIGGNLQLLQTDPRLDDRSRQRVRIAIGAVD---RGAKLSSQLLAFARRQPLQPRSIN 726 L +I G L LLQ +L R GA+D R A L+ +LLAF+R+QPL+P IN Sbjct: 62 LAVIIGGLNLLQR--KLSKGETDVGRFVEGAMDGAHRAAALTQRLLAFSRQQPLKPEPIN 119 Query: 727 LERVVLNMDDLLRRAVGENIEISTVITHDLWNTMLDPNQVENLIINTAINSRDAMPNGGR 786 R+V M +LL R +GE I++ T LW DP+Q+E+ ++N ++N+RDAMPNGG+ Sbjct: 120 ANRLVGGMTELLMRTLGETIKVETAFGAGLWQVKADPSQLESALLNLSVNARDAMPNGGK 179 Query: 787 LTLQIDNVQLSDPAFLSQADLPPGDYVELQISDNGAGMSPEVRERAFEPFFTTKREGEGT 846 LT++ N + D + ++ + G +V + ++D G GM+P+V +AF+PF+TTK G+GT Sbjct: 180 LTIETSNAYV-DERYARESAIAAGQFVLVAVTDTGTGMTPDVLAKAFDPFYTTKGVGKGT 238 Query: 847 GLGLSMAYGFVKQSKGHISLHSEAGKGTTIRIYFPR 882 GLGLS YGFV+QS G++ ++SE G GTTI+IY PR Sbjct: 239 GLGLSQVYGFVRQSGGNVRIYSEPGVGTTIKIYLPR 274 >AGpA755_2 [T] COG0642 Signal transduction histidine kinase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 310 Score = 233 bits (595), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 137/313 (43%), Positives = 186/313 (59%), Gaps = 26/313 (8%) Query: 604 MIAVSTDITERRRAEDALRELNDTLEQRVVE--------------EILERSRAEAALRQM 649 ++ VS DITER ++E+ R LN+TLE+RV E E+ +R RAE LR Sbjct: 2 LVGVSADITERMQSEEQQRHLNETLEERVAERTRELEEAHRLVLAEVSQRERAEEQLRHA 61 Query: 650 QKMEAVGQLTGGVAHDFNNVLQIIGGNLQLLQTDPRLDDRSRQRVRIAIGAVDRGAKLSS 709 QKMEA+GQLTGGVAHDFNN+L + GNL+LL+ D ++ + + A+ RGA L+ Sbjct: 62 QKMEAIGQLTGGVAHDFNNLLMAVLGNLELLRKHLTDDAKATRLIDGALQGAQRGASLTQ 121 Query: 710 QLLAFARRQPLQPRSINLERVVLNMDDLLRRAVGENIEISTVITHDLWNTMLDPNQVENL 769 +LLAFARRQ LQ ++L +V NM DLL+R+VG I I V L D NQVE Sbjct: 122 RLLAFARRQDLQVGPVDLAGLVTNMQDLLQRSVGSRIAIEVVAPERLPAVSADANQVELA 181 Query: 770 IINTAINSRDAMPNGGRLTLQIDNVQLSDPAFLSQAD-LPPGDYVELQISDNGAGMSPEV 828 ++N A+N+RDAMP+GG T++I + P +D L PG YV L + D G GM Sbjct: 182 LLNLAVNARDAMPDGG--TIKIGLKEAVQPTV---SDLLAPGRYVVLSVIDQGQGMDAAT 236 Query: 829 RERAFEPFFTTKREGEGTGLGLSMAYGFVKQSKGHISLHSEAGKGTTIRIYFPRCI---- 884 ++A EPFF+TK G+GTGLGLSM +G Q G + L S G+GTT ++ P Sbjct: 237 LQKAIEPFFSTKELGKGTGLGLSMVHGLALQLNGQLKLASAVGEGTTADLWIPVSTSQSL 296 Query: 885 --DQEVVIDDNRD 895 +Q+V + D R+ Sbjct: 297 EKEQDVAVADARN 309 >SMa1142_2 [T] COG0642 Signal transduction histidine kinase Sme Sinorhizobium meliloti Length = 253 Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 159/229 (69%), Gaps = 3/229 (1%) Query: 654 AVGQLTGGVAHDFNNVLQIIGGNLQLLQTDPRL-DDRSRQRVRIAIGAVDRGAKLSSQLL 712 AVGQLTGG+AHDFNN+L +I GNL++++ RL D++ ++ A A D GAKL++QLL Sbjct: 1 AVGQLTGGLAHDFNNLLTVITGNLEMIEA--RLQDEKLMPLLQEAQAAADDGAKLTAQLL 58 Query: 713 AFARRQPLQPRSINLERVVLNMDDLLRRAVGENIEISTVITHDLWNTMLDPNQVENLIIN 772 AF RRQPL P+ +++ +V N LL R +GE IE+STV+ ++D +Q++N ++N Sbjct: 59 AFGRRQPLNPKLVDVGELVTNFSKLLTRTLGETIELSTVVKGSANLALIDVSQLQNTVLN 118 Query: 773 TAINSRDAMPNGGRLTLQIDNVQLSDPAFLSQADLPPGDYVELQISDNGAGMSPEVRERA 832 +N+RDAMPNGGRLT+++ L L ++ G YV + ++D G GM+ EV+ A Sbjct: 119 LGLNARDAMPNGGRLTIEVSTTVLDRDYALMLPEVRMGHYVLVAVTDTGVGMTEEVKRHA 178 Query: 833 FEPFFTTKREGEGTGLGLSMAYGFVKQSKGHISLHSEAGKGTTIRIYFP 881 FEPF+TTK G GTGLGLSM YGFVKQS GHI L+SE +G ++R++ P Sbjct: 179 FEPFYTTKGFGAGTGLGLSMVYGFVKQSGGHIQLYSEPDRGASVRLFLP 227 >BMEI0947_2 [T] COG0642 Signal transduction histidine kinase Bme Brucella melitensis Length = 269 Score = 224 bits (572), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 117/250 (46%), Positives = 157/250 (62%) Query: 638 ERSRAEAALRQMQKMEAVGQLTGGVAHDFNNVLQIIGGNLQLLQTDPRLDDRSRQRVRIA 697 E+ E + Q QKM+AVGQL GG+AHDFNNVL I + LL T+ R D S + Sbjct: 2 EQKALENQMAQSQKMQAVGQLAGGIAHDFNNVLTAIIMSSDLLLTNHRASDPSFPDIMNI 61 Query: 698 IGAVDRGAKLSSQLLAFARRQPLQPRSINLERVVLNMDDLLRRAVGENIEISTVITHDLW 757 +R A L QLLAF+RRQ L+P ++L V+ ++ LL R VG++IE+ DLW Sbjct: 62 KQNANRAASLVRQLLAFSRRQTLRPEVLDLTDVLADLRMLLARLVGKDIELKIDHGRDLW 121 Query: 758 NTMLDPNQVENLIINTAINSRDAMPNGGRLTLQIDNVQLSDPAFLSQADLPPGDYVELQI 817 D Q E + +N A+N+RDAMP GG++TL+ N+ +D A L DLP DYV ++ Sbjct: 122 PVKADLGQFEQVAVNLAVNARDAMPEGGQITLRTRNIPAADAAKLHYRDLPEADYVVFEV 181 Query: 818 SDNGAGMSPEVRERAFEPFFTTKREGEGTGLGLSMAYGFVKQSKGHISLHSEAGKGTTIR 877 D G G+ +V E+ FEPFFTTK G+GTGLGLSM YG +KQ+ G I SE GKGTT + Sbjct: 182 EDTGTGIPADVLEKIFEPFFTTKEVGKGTGLGLSMVYGIIKQTGGFIYCDSEVGKGTTFK 241 Query: 878 IYFPRCIDQE 887 I+ PR I+++ Sbjct: 242 IFLPRLIEEK 251