BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0006.p         (50 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3279 [JD] COG2026 Cytotoxic translational repressor of toxin-...    70   1e-12

>RSc3279 [JD] COG2026 Cytotoxic translational repressor of toxin-antitoxin
          stability system Rso Ralstonia solanacearum
          Length = 86

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/50 (68%), Positives = 37/50 (74%)

Query: 1  MPGCQNVKRLMNHEYGYRLRVGQYRVLFDWTVEIRIVEIHEVRKRDERTY 50
          MP C+ V+ L  H YGYRLRVG YRVL DW   IRIV+I EV KRDERTY
Sbjct: 35 MPHCRQVRALREHRYGYRLRVGDYRVLSDWDDGIRIVDIQEVSKRDERTY 84