BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0038.p (420 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1582_2 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit ... 389 e-108 NMB0728_2 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit ... 281 2e-75 NMA0937_2 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit ... 272 1e-72 ECs2420_2 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit ... 249 1e-65 YPO2428_2 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit ... 248 2e-65 >RSc1582_2 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit Rso Ralstonia solanacearum Length = 665 Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust. Identities = 186/258 (72%), Positives = 215/258 (83%), Gaps = 3/258 (1%) Query: 145 DAPVGQNFRDYLQLNDLKFTIKLTPNKADCLSVLGVAREVSALTGTPLKAPAYQAAAVNL 204 D PVG + R L L+D F IKLTPNKADCLS+ GVAREVSALTG P+ P AV L Sbjct: 1 DTPVGADIRKVLDLDDQIFIIKLTPNKADCLSIHGVAREVSALTGAPITLPTMAPVAVTL 60 Query: 205 DEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMKQRLERSGQRPISALVDISNYVMLE 264 +KLPV++ APDLCGRFAGR+IRG+NA+A TP WM R+ER+G R +SALVDISNYVMLE Sbjct: 61 SDKLPVKVEAPDLCGRFAGRIIRGVNARAKTPAWMVSRIERAGMRSVSALVDISNYVMLE 120 Query: 265 LGRPSHVFDLDKIHGSLDVRWGRKGESLKLLNGNTVEVDEWVGVISDDKEIESLAGIMGG 324 LGRPSHVFDLDKIHG L VRWG+ GE LKLLNG+TV VD+ VGVISD++ IESLAGIMGG Sbjct: 121 LGRPSHVFDLDKIHGGLTVRWGKPGEQLKLLNGDTVTVDDKVGVISDEQAIESLAGIMGG 180 Query: 325 DATAVSLDTTNIYLEAAFWFPQAIQGRARRYNFSTDAAHRFERGVDFATVVDHIERITAL 384 D TAV+LDT NIY+EAAFW+P AIQGRARRYNFSTDA HRFERGVD+AT+V+HIERI+AL Sbjct: 181 DKTAVTLDTQNIYVEAAFWWPAAIQGRARRYNFSTDAGHRFERGVDYATIVEHIERISAL 240 Query: 385 LLEICGTPETRVGPVDDQ 402 +L+ICG + GP+DDQ Sbjct: 241 ILDICG---GQAGPIDDQ 255 >NMB0728_2 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit Nme Neisseria meningitidis MC58 Length = 642 Score = 281 bits (719), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 137/240 (57%), Positives = 176/240 (73%) Query: 151 NFRDYLQLNDLKFTIKLTPNKADCLSVLGVAREVSALTGTPLKAPAYQAAAVNLDEKLPV 210 N R+YL L+D FT+K+TPN+ADCLS+ G+AREVSALTG + P A + K PV Sbjct: 2 NIREYLDLDDTLFTLKITPNRADCLSIKGIAREVSALTGCAFRQPEIHTAPITGSRKQPV 61 Query: 211 RISAPDLCGRFAGRVIRGLNAKAATPQWMKQRLERSGQRPISALVDISNYVMLELGRPSH 270 +I+AP CGRF RVI +NA+A TP WMKQRLERSG R ISALVDI NYVMLE+G+P H Sbjct: 62 QINAPADCGRFISRVIENVNARATTPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMH 121 Query: 271 VFDLDKIHGSLDVRWGRKGESLKLLNGNTVEVDEWVGVISDDKEIESLAGIMGGDATAVS 330 VFD DK+ GSL +R R+GE+L+ LN TV + E V++D+K + SLAG+MGG A+AVS Sbjct: 122 VFDADKLSGSLHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVS 181 Query: 331 LDTTNIYLEAAFWFPQAIQGRARRYNFSTDAAHRFERGVDFATVVDHIERITALLLEICG 390 T NI LEAA++ P+ I G++R+Y F +D++ RFERGVD+ D IER T L+L+ICG Sbjct: 182 DGTQNIVLEAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICG 241 >NMA0937_2 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit NmA Neisseria meningitidis Z2491 Length = 642 Score = 272 bits (695), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 136/240 (56%), Positives = 172/240 (71%) Query: 151 NFRDYLQLNDLKFTIKLTPNKADCLSVLGVAREVSALTGTPLKAPAYQAAAVNLDEKLPV 210 N R+YL L+D FT+K+TPN+ADCLSV G+AREVSALTG + P + + V Sbjct: 2 NIREYLDLDDTLFTLKITPNRADCLSVKGIAREVSALTGCAFRQPEIRKMPSEGGKTRAV 61 Query: 211 RISAPDLCGRFAGRVIRGLNAKAATPQWMKQRLERSGQRPISALVDISNYVMLELGRPSH 270 +I AP CGRF RVI +NAKAATP WMKQRLERSG R IS LVDI NYVMLE+G+P H Sbjct: 62 KIDAPADCGRFISRVIENVNAKAATPDWMKQRLERSGIRSISVLVDIGNYVMLEIGQPMH 121 Query: 271 VFDLDKIHGSLDVRWGRKGESLKLLNGNTVEVDEWVGVISDDKEIESLAGIMGGDATAVS 330 VFD DK+ GSL +R R+GE+L+ LN TV + E V++D+K SLAG+MGG A+AVS Sbjct: 122 VFDADKLSGSLHIRRAREGETLECLNEKTVSLSENTLVVADEKGALSLAGLMGGAASAVS 181 Query: 331 LDTTNIYLEAAFWFPQAIQGRARRYNFSTDAAHRFERGVDFATVVDHIERITALLLEICG 390 T NI LEAA++ P+ I G++R+Y F +D++ RFERGVD+ D IER T L+L+ICG Sbjct: 182 DGTQNIVLEAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICG 241 >ECs2420_2 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit Ecs Escherichia coli O157:H7 Length = 656 Score = 249 bits (635), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 119/257 (46%), Positives = 172/257 (66%), Gaps = 3/257 (1%) Query: 145 DAPVGQNFRDYLQLNDLKFTIKLTPNKADCLSVLGVAREVSALTGTPLKAPAYQAAAVNL 204 DAP+G + R+YL+L+D I +TPN+ADCL ++GVAR+V+ L PL P + Sbjct: 1 DAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVAVLNQLPLVEPEIVPVGATI 60 Query: 205 DEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMKQRLERSGQRPISALVDISNYVMLE 264 D+ LP+ + AP+ C R+ GRV++G+N KA TP WMK++L R G R I A+VD++NYV+LE Sbjct: 61 DDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLE 120 Query: 265 LGRPSHVFDLDKIHGSLDVRWGRKGESLKLLNGNTVEVDEWVGVISDDKEIESLAGIMGG 324 LG+P H FD D+I G + VR ++GE+L LL+G +++ VI+D + ++ GI GG Sbjct: 121 LGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGG 180 Query: 325 DATAVSLDTTNIYLEAAFWFPQAIQGRARRYNFSTDAAHRFERGVDFATVVDHIERITAL 384 + + V+ +T N+ LE AF+ P +I GRARR+ TDA+HR+ERGVD A +ER T L Sbjct: 181 EHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRYERGVDPALQYKAMERATRL 240 Query: 385 LLEICGTPETRVGPVDD 401 L++ICG GPV D Sbjct: 241 LIDICG---GEAGPVID 254 >YPO2428_2 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit Ype Yersinia pestis Length = 656 Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 119/257 (46%), Positives = 173/257 (67%), Gaps = 3/257 (1%) Query: 145 DAPVGQNFRDYLQLNDLKFTIKLTPNKADCLSVLGVAREVSALTGTPLKAPAYQAAAVNL 204 DAP+G + R+YL L+D I +TPN+ADCL ++GVAR+V+ + PL P ++ Sbjct: 1 DAPIGVDVREYLHLDDKTIEISVTPNRADCLGIIGVARDVAVVNQLPLTEPDMAEVVASI 60 Query: 205 DEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMKQRLERSGQRPISALVDISNYVMLE 264 ++ LP+R+ AP C R+ GRV++G+N KAATP WM+++L R G R I +VD++N+V+LE Sbjct: 61 NDTLPIRVDAPQACPRYLGRVVKGINVKAATPLWMREKLRRCGIRSIDPVVDVTNFVLLE 120 Query: 265 LGRPSHVFDLDKIHGSLDVRWGRKGESLKLLNGNTVEVDEWVGVISDDKEIESLAGIMGG 324 LG+P H FDLD+I G + VR GE L LL+G +++ VI+D ++ ++AGI GG Sbjct: 121 LGQPMHAFDLDRISGGVIVRLATDGEELTLLDGTKAKLNADTLVIADHQKPLAMAGIFGG 180 Query: 325 DATAVSLDTTNIYLEAAFWFPQAIQGRARRYNFSTDAAHRFERGVDFATVVDHIERITAL 384 + + V+ +T N+ LE+AF+ P +I GRARR+ TDA+HR+ERGVD A IER T L Sbjct: 181 EHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDASHRYERGVDPALQHKAIERATRL 240 Query: 385 LLEICGTPETRVGPVDD 401 L++ICG GPV D Sbjct: 241 LIDICG---GEAGPVVD 254