BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0536.p (230 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VC2553 [V] COG1136 ABC-type antimicrobial peptide transport syst... 253 2e-67 PA4064 [V] COG1136 ABC-type antimicrobial peptide transport syst... 240 2e-63 lin2471 [V] COG1136 ABC-type antimicrobial peptide transport sys... 144 2e-34 TM0705 [V] COG1136 ABC-type antimicrobial peptide transport syst... 140 3e-33 lin2725 [V] COG1136 ABC-type antimicrobial peptide transport sys... 140 3e-33 >VC2553 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Vch Vibrio cholerae Length = 238 Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 127/224 (56%), Positives = 160/224 (71%), Gaps = 3/224 (1%) Query: 1 MHDLRFTWPGQTHPALALPHFQVAAGEHVFVSGPSGSGKSTLLAAIGGIIVPQAGTVEVL 60 ++D+ F WPG + P L + H Q+A GEH+FV GPSG GKSTLL+ + GI G V +L Sbjct: 15 LNDVVFCWPGASSPTLDIAHLQIARGEHLFVKGPSGCGKSTLLSLLTGINTATQGVVSLL 74 Query: 61 GQPLHRLSAARRDRFRVDHIGFIFQQFNLLPYLSILDNVLLPCQFSSYRRERAGQQGADL 120 G L RLSA++RDRFR DHIG+IFQQFNLLPYLS+LDNV LPC FS+ R++ Q L Sbjct: 75 GSDLSRLSASQRDRFRADHIGYIFQQFNLLPYLSVLDNVTLPCHFSALRKQ---QVDGPL 131 Query: 121 KSVAQSLLAALDLAPGLWMRPVTQLSIGQQQRVAAARSLIGRPEIIVADEPTSALDSDRQ 180 AQSLL L L L +PVT+LSIGQQQRVAAAR+L+G P++I+ADEPTSALD D + Sbjct: 132 SHKAQSLLERLHLPSALLNKPVTELSIGQQQRVAAARALMGEPQLIIADEPTSALDYDNR 191 Query: 181 QAFLNLLQRECAQSGAALVFVSHDQRLAERFNRRIALEQLNQAA 224 +AF+ LL+ E + G+ LVFVSHD L + F R + L LN+A Sbjct: 192 EAFIALLREEAERVGSTLVFVSHDPTLEKLFERSVHLPTLNRAG 235 >PA4064 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Pae Pseudomonas aeruginosa Length = 234 Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 126/226 (55%), Positives = 164/226 (72%), Gaps = 1/226 (0%) Query: 1 MHDLRFTWPGQTHPALALPHFQVAAGEHVFVSGPSGSGKSTLLAAIGGIIVPQAGTVEVL 60 + +L F WPGQ L +P F + GE +F+ GPSGSGK+TLL +GG+ P G++ +L Sbjct: 7 LTNLGFAWPGQAE-LLDIPSFHLERGESLFLKGPSGSGKTTLLGLLGGVQKPGRGSIRLL 65 Query: 61 GQPLHRLSAARRDRFRVDHIGFIFQQFNLLPYLSILDNVLLPCQFSSYRRERAGQQGADL 120 G+ L +LSAARRD FRVDH G+IFQQFNLLP+LS+ +NV LPC FS+ RR+RA ++ Sbjct: 66 GEDLEKLSAARRDHFRVDHTGYIFQQFNLLPFLSVRENVELPCHFSALRRQRARERHGSP 125 Query: 121 KSVAQSLLAALDLAPGLWMRPVTQLSIGQQQRVAAARSLIGRPEIIVADEPTSALDSDRQ 180 A LL L L L R LSIGQQQRVAAAR+LIG+PE+++ADEPTSALD+D + Sbjct: 126 AQAASHLLGQLGLGGELHERRADSLSIGQQQRVAAARALIGQPELVIADEPTSALDADSR 185 Query: 181 QAFLNLLQRECAQSGAALVFVSHDQRLAERFNRRIALEQLNQAARP 226 +AFL LL EC ++GA+L+FVSHDQ LA F+R ++L LN+AARP Sbjct: 186 EAFLQLLFAECREAGASLLFVSHDQSLAGLFDRSLSLSDLNRAARP 231 >lin2471 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Lin Listeria innocua Length = 226 Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 126/212 (59%), Gaps = 9/212 (4%) Query: 7 TWPGQTHPALALPHFQVAAGEHVFVSGPSGSGKSTLLAAIGGIIVPQAGTVEVLGQPLHR 66 + P H AL +F+ GE + + GPSGSGKSTLL+ G ++ P GT+ + G+ + Sbjct: 16 SGPSIIH-ALKETNFEAKKGELIAIVGPSGSGKSTLLSLAGALLTPTGGTISINGKSVGN 74 Query: 67 LSAARRDRFRVDHIGFIFQQFNLLPYLSILDNVLLPCQFSSYRRERAGQQGADLKSVAQS 126 LS+ + R++ IGFIFQ +L+PYL + D + S+ + AG+ A+L+ S Sbjct: 75 LSSKEQTALRLEEIGFIFQAAHLVPYLHVKDQI-------SFIGKMAGKSAAELEKDTAS 127 Query: 127 LLAALDLAPGLWMRPVTQLSIGQQQRVAAARSLIGRPEIIVADEPTSALDSDRQQAFLNL 186 LL+ L ++ P LS GQ+QRVA AR+LI +P +I+ADEPT++LD++R + + L Sbjct: 128 LLSQLGISDRANFYP-KDLSGGQKQRVAIARALINQPSVILADEPTASLDTERSREVVEL 186 Query: 187 LQRECAQSGAALVFVSHDQRLAERFNRRIALE 218 ++ E Q+ + V+HD+R+ + N +E Sbjct: 187 IRNEVVQTSRTAIMVTHDERMLDLVNHVYRME 218 >TM0705 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Tma Thermotoga maritima Length = 228 Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 129/218 (59%), Gaps = 11/218 (5%) Query: 1 MHDLRFTWPGQTH-PALALPHFQVAAGEHVFVSGPSGSGKSTLLAAIGGIIVPQAGTVEV 59 +H+L + G+ AL + ++ GE V + GPSGSGK+TLL + G+ P GTV + Sbjct: 7 VHNLWKEYNGKEKVTALKGINLRINTGEFVVILGPSGSGKTTLLNCLSGVDRPTRGTVII 66 Query: 60 LGQPLHRLSAARRDRFRVDHIGFIFQQFNLLPYLSILDNVLLPCQFSSYRRERAGQQGAD 119 G L+ LS R RFR +++GF+FQ FNL+P L+ ++NV LP R+ A ++ Sbjct: 67 HGTDLYTLSEEERTRFRAENMGFVFQFFNLVPVLTAIENVELPLLILGVNRKEARER--- 123 Query: 120 LKSVAQSLLAALDLAPGLWMRPVTQLSIGQQQRVAAARSLIGRPEIIVADEPTSALDSDR 179 A +L + LA P +LS G++QRVA AR+++ P++I ADEPT ALD++ Sbjct: 124 ----AFEILRKVGLAHKCDRFP-EELSGGEKQRVAIARAIVHNPKVIWADEPTGALDNET 178 Query: 180 QQAFLNLLQRECAQSGAALVFVSHDQRLAERFNRRIAL 217 + ++LL + + LV V+HD+R+AE+ +R I + Sbjct: 179 GRMIIDLLME--MKENSTLVVVTHDERIAEKADRVIRI 214 >lin2725 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Lin Listeria innocua Length = 223 Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 119/208 (57%), Gaps = 8/208 (3%) Query: 11 QTHPALALPHFQVAAGEHVFVSGPSGSGKSTLLAAIGGIIVPQAGTVEVLGQPLHRLSAA 70 Q L +VA GE V + GPSG+GKST L+ G ++ P G + + G L+ +S Sbjct: 17 QVIEVLKSVSLEVAQGEFVAIVGPSGAGKSTFLSIAGALLSPTEGEIAIGGTTLNNMSEK 76 Query: 71 RRDRFRVDHIGFIFQQFNLLPYLSILDNVLLPCQFSSYRRERAGQQGADLKSVAQSLLAA 130 + R+D +GFIFQ NL+PYL++ D +L+ + S G++G+ K A LL Sbjct: 77 ALTKVRLDKVGFIFQGANLIPYLNVRDQLLVIAELS-------GEKGSAAKERADKLLQE 129 Query: 131 LDLAPGLWMRPVTQLSIGQQQRVAAARSLIGRPEIIVADEPTSALDSDRQQAFLNLLQRE 190 L L P LS G++QRVA AR+L+ P+II+ADEPT++LD++R + ++ E Sbjct: 130 LGLTARQNNYP-ESLSGGEKQRVAIARALMNDPDIILADEPTASLDANRGHKVVQMIADE 188 Query: 191 CAQSGAALVFVSHDQRLAERFNRRIALE 218 Q A + V+HD+R+ + +R I +E Sbjct: 189 VKQKNKAAIMVTHDERVLDLVDRVIRIE 216