BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0478.p         (247 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1617 [O] COG2360 Leu/Phe-tRNA-protein transferase Rso Ralston...   267   2e-71
PA2617 [O] COG2360 Leu/Phe-tRNA-protein transferase Pae Pseudomo...   222   5e-58
XF1446 [O] COG2360 Leu/Phe-tRNA-protein transferase Xfa Xylella ...   216   3e-56
STM0955 [O] COG2360 Leu/Phe-tRNA-protein transferase Sty Salmone...   205   6e-53
aat [O] COG2360 Leu/Phe-tRNA-protein transferase Eco Escherichia...   194   1e-49

>RSc1617 [O] COG2360 Leu/Phe-tRNA-protein transferase Rso Ralstonia
           solanacearum
          Length = 248

 Score =  267 bits (682), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 139/235 (59%), Positives = 162/235 (68%), Gaps = 8/235 (3%)

Query: 1   MIAWLDLDTPFPDVSRAL---ADPAGLLAAGADLSPQRLLEAYRHGIFPWFSEGQPILWW 57
           MIAWLD   PFP V RAL   ++  GLLAA ADLSPQRLL AYR GIFPW+++GQP+LWW
Sbjct: 1   MIAWLDPHDPFPPVDRALGPDSEAPGLLAASADLSPQRLLIAYRQGIFPWYAQGQPVLWW 60

Query: 58  STDPRMVLRTDQFVVSDSLKKTLRRIERSRHGDGLWQVTFDTVFEQVMQGCAGPRRHEQ- 116
           STDPRMVLR + F VS + +KTLRR+      D  W++  D  F  VM  CA   R  Q 
Sbjct: 61  STDPRMVLRPEDFRVSTTFRKTLRRVL----DDPTWEIRIDHAFRDVMVDCATTARPGQH 116

Query: 117 GTWISPEIMAGYTGLHRAGYAHSSEVWLNGELVGGAYGVSIGRMFYGESMFARVSDASKV 176
           GTWI+ +++  YT LHR GYAHS E W  G  VGG YGV++G MFYGESMFA  +DASK+
Sbjct: 117 GTWITEDVIQAYTALHRRGYAHSVETWHGGRRVGGLYGVALGHMFYGESMFAHRTDASKI 176

Query: 177 ALAHLVFFLRSHGVEMIDCQQETSHLASLGARPIPRSDFLRHLRAAIQWPQIRGW 231
           ALA L  FL S GV MIDCQQET HLASLG  P+PR+ FL H+R A   P I  W
Sbjct: 177 ALAALCAFLGSRGVAMIDCQQETEHLASLGGAPVPRAAFLAHVREAASAPAIVPW 231


>PA2617 [O] COG2360 Leu/Phe-tRNA-protein transferase Pae Pseudomonas
           aeruginosa
          Length = 226

 Score =  222 bits (566), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 114/221 (51%), Positives = 143/221 (64%), Gaps = 9/221 (4%)

Query: 1   MIAWLD-LDTPFPDVSRALADPAGLLAAGADLSPQRLLEAYRHGIFPWFSEGQPILWWST 59
           M+ WL   D  FP + +AL +P GLLAAG DL+PQRL+ AYRHG FPW+ +GQPILWWS 
Sbjct: 1   MLTWLSRTDFDFPPLDKALQEPNGLLAAGGDLNPQRLVAAYRHGCFPWYQDGQPILWWSP 60

Query: 60  DPRMVLRTDQFVVSDSLKKTLRRIERSRHGDGLWQVTFDTVFEQVMQGCAGPRRHEQGTW 119
           DPR VL  D+  VS SL K LR+          ++VTF+  F  V+Q CA PR +  GTW
Sbjct: 61  DPRTVLFPDELHVSRSLAKCLRQQR--------FEVTFNRDFRAVIQACAAPRNYADGTW 112

Query: 120 ISPEIMAGYTGLHRAGYAHSSEVWLNGELVGGAYGVSIGRMFYGESMFARVSDASKVALA 179
           I+  +   Y  LH  G AHS EVW   +LVGG YG+++GR+F+GESMF+R  +ASKV   
Sbjct: 113 ITTPMQLAYQELHLRGIAHSVEVWQERQLVGGLYGLAMGRLFFGESMFSRADNASKVGFV 172

Query: 180 HLVFFLRSHGVEMIDCQQETSHLASLGARPIPRSDFLRHLR 220
            LV  LR  G  +IDCQ  T HL SLGAR I R +F  +L+
Sbjct: 173 TLVRHLRDAGFVLIDCQMPTRHLHSLGARAISRGEFADYLQ 213


>XF1446 [O] COG2360 Leu/Phe-tRNA-protein transferase Xfa Xylella fastidiosa
           9a5c
          Length = 243

 Score =  216 bits (551), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 111/217 (51%), Positives = 138/217 (63%), Gaps = 9/217 (4%)

Query: 8   DTPFPDVSRALADPAGLLAAGADLSPQRLLEAYRHGIFPWFSEGQPILWWSTDPRMVLRT 67
           +TPFP    AL +P GLLA G DL+PQRLL AYR+GIFPWF+EGQP LWWS DPR V R+
Sbjct: 13  NTPFPPAEYALREPNGLLAIGGDLTPQRLLAAYRNGIFPWFTEGQPPLWWSPDPRTVFRS 72

Query: 68  DQFVVSDSLKKTLRRIERSRHGDGLWQVTFDTVFEQVMQGCAG-PRRHEQGTWISPEIMA 126
           D   +S   ++ LR           W V  DT+F  V+  CA  PRR + GTWI+  +  
Sbjct: 73  DSIHLSRRFRRNLR--------TSTWTVRADTMFAAVIDACASTPRRGQDGTWITANMRE 124

Query: 127 GYTGLHRAGYAHSSEVWLNGELVGGAYGVSIGRMFYGESMFARVSDASKVALAHLVFFLR 186
            Y  LH+  YAHS EV+    LVGG YGV++GRMF+GESMF+  + ASK+ALA L  FL 
Sbjct: 125 AYLTLHQHSYAHSVEVFDGTMLVGGIYGVALGRMFFGESMFSTRNGASKIALASLAHFLH 184

Query: 187 SHGVEMIDCQQETSHLASLGARPIPRSDFLRHLRAAI 223
           +H   +ID Q E  HL +LGA   PR DFL ++R  I
Sbjct: 185 THSAPLIDAQVENQHLLNLGAERWPRKDFLAYVRRLI 221


>STM0955 [O] COG2360 Leu/Phe-tRNA-protein transferase Sty Salmonella
           typhimurium LT2
          Length = 234

 Score =  205 bits (522), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 116/228 (50%), Positives = 140/228 (61%), Gaps = 11/228 (4%)

Query: 11  FPDVSRALADPAGLLAAGADLSPQRLLEAYRHGIFPWFSEGQPILWWSTDPRMVLRTDQF 70
           FP    AL +P GLLA G DLSP RLL AY+HGIFPWFS G PILWWS DPR VL  ++F
Sbjct: 13  FPSPEGALREPNGLLALGGDLSPARLLMAYQHGIFPWFSPGDPILWWSPDPRAVLWPEKF 72

Query: 71  VVSDSLKKTLRRIERSRHGDGLWQVTFDTVFEQVMQGCAGPRRHEQGTWISPEIMAGYTG 130
            +S S+K+         H    ++VT +  F++V+ GCA  R  ++GTWI+  I   Y  
Sbjct: 73  HLSRSMKRF--------HNASPYRVTLNYAFDRVIDGCANHR--DEGTWITRGIEEAYRR 122

Query: 131 LHRAGYAHSSEVWLNGELVGGAYGVSIGRMFYGESMFARVSDASKVALAHLVFFLRSHGV 190
           LH  G+AHS EVW + ELVGG YGVS G +F GESMF+R  +ASK AL         HG 
Sbjct: 123 LHELGHAHSIEVWRDRELVGGMYGVSQGALFCGESMFSRQENASKTALLVFCAEFTRHGG 182

Query: 191 EMIDCQQETSHLASLGARPIPRSDFLRHLRAAIQWP-QIRGWEPLNLL 237
           ++IDCQ   SH ASLGA  IPR D+L HL A  Q P   R W P  L 
Sbjct: 183 KLIDCQVLNSHTASLGAIEIPRRDYLDHLAALRQQPLASRFWVPRTLF 230


>aat [O] COG2360 Leu/Phe-tRNA-protein transferase Eco Escherichia coli
           K12
          Length = 234

 Score =  194 bits (494), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/210 (50%), Positives = 130/210 (61%), Gaps = 10/210 (4%)

Query: 11  FPDVSRALADPAGLLAAGADLSPQRLLEAYRHGIFPWFSEGQPILWWSTDPRMVLRTDQF 70
           FP    AL +P GLLA G DLSP RLL AY+ GIFPWFS G PILWWS DPR VL  +  
Sbjct: 13  FPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESL 72

Query: 71  VVSDSLKKTLRRIERSRHGDGLWQVTFDTVFEQVMQGCAGPRRHEQGTWISPEIMAGYTG 130
            +S S+K+         H    ++VT +  F QV++GCA  R  E+GTWI+  ++  Y  
Sbjct: 73  HISRSMKRF--------HKRSPYRVTMNYAFGQVIEGCASDR--EEGTWITRGVVEAYHR 122

Query: 131 LHRAGYAHSSEVWLNGELVGGAYGVSIGRMFYGESMFARVSDASKVALAHLVFFLRSHGV 190
           LH  G+AHS EVW   ELVGG YGV+ G +F GESMF+R+ +ASK AL         HG 
Sbjct: 123 LHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGG 182

Query: 191 EMIDCQQETSHLASLGARPIPRSDFLRHLR 220
           ++IDCQ    H ASLGA  IPR D+L +L 
Sbjct: 183 KLIDCQVLNDHTASLGACEIPRRDYLNYLN 212