BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0477.p (242 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1616 [O] COG2935 Putative arginyl-tRNA Rso Ralstonia solanace... 358 8e-99 PA2618 [O] COG2935 Putative arginyl-tRNA Pae Pseudomonas aeruginosa 210 2e-54 BMEI1199 [O] COG2935 Putative arginyl-tRNA Bme Brucella melitensis 184 2e-46 CC1572 Non COG 178 1e-44 XF1018 [O] COG2935 Putative arginyl-tRNA Xfa Xylella fastidiosa ... 172 6e-43 >RSc1616 [O] COG2935 Putative arginyl-tRNA Rso Ralstonia solanacearum Length = 257 Score = 358 bits (918), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 171/246 (69%), Positives = 199/246 (80%), Gaps = 5/246 (2%) Query: 1 MTHLKDLPFSTLQFYATAPYPCSYLDDQQARSQVATPSHLINADVYSELVKTGFRRSGIF 60 M+ LK+LP S LQFYATAPY CSYL+ + ARSQVATP+HLINADVYS+LV+ GFRRSGIF Sbjct: 1 MSKLKELPLSALQFYATAPYACSYLEGRLARSQVATPAHLINADVYSKLVRAGFRRSGIF 60 Query: 61 TYRPYCDGCNACTPVRIRVADFERNRSQRRAWERNRGLQTLVTNLTYAHEHYELYLRYQC 120 TYRP+CD C+ACTP R+ VA F +R+QRRA ER++ L+ LV LTY EHY+LYL YQ Sbjct: 61 TYRPHCDDCHACTPCRVVVAPFVPSRAQRRAAERHQSLEALVAPLTYVEEHYQLYLLYQS 120 Query: 121 ARHAGGGMDQDSRDQYAQFLLQSKVNTRLVEFREPD-----GTLRMVSIIDVLNDGLSSV 175 RHAGGGMD DSRDQY QFLLQS+VN+RLVEFREP G LRMVS+IDVL DGLSSV Sbjct: 121 VRHAGGGMDHDSRDQYEQFLLQSRVNSRLVEFREPPESESAGRLRMVSMIDVLEDGLSSV 180 Query: 176 YTFFDPDLPTASFGTYNILWQIEQARQLEMPYVYLGYWIKESQKMAYKTNYQPLEALHEG 235 YTF+DP AS+GTYN+LWQI QA+ LE+PYVYLGYWI++S+KMAYK +QPLE L G Sbjct: 181 YTFYDPLERKASYGTYNVLWQIAQAQALELPYVYLGYWIEQSRKMAYKAQFQPLELLVNG 240 Query: 236 EWSLLE 241 EW E Sbjct: 241 EWRRFE 246 >PA2618 [O] COG2935 Putative arginyl-tRNA Pae Pseudomonas aeruginosa Length = 235 Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 108/232 (46%), Positives = 141/232 (60%), Gaps = 1/232 (0%) Query: 9 FSTLQFYATAPYPCSYLDDQQARSQVATPSHLINADVYSELVKTGFRRSGIFTYRPYCDG 68 + L+FYAT P+PCSYL ++QA + PS ++ +Y+ L + GFRRSG YRP+C Sbjct: 4 LARLKFYATQPHPCSYLPEEQATTLFLDPSQPMDTQLYASLSEVGFRRSGDHLYRPHCQH 63 Query: 69 CNACTPVRIRVADFERNRSQRRAWERNRGLQTLVTNLTYAHEHYELYLRYQCARHAGGGM 128 C AC RI VADF NR QRR +RN LQ + ++ E+Y+LY RY RHA G M Sbjct: 64 CTACIAARIPVADFSPNRQQRRILKRNAELQVIRKRPSFNEEYYDLYRRYIEQRHADGDM 123 Query: 129 DQDSRDQYAQFLLQSKVNTRLVEFREPDGTLRMVSIIDVLNDGLSSVYTFFDPDLPTASF 188 SRDQ+A FL++ EFR G L +++ DVL +GLS+VYTF+DPD S Sbjct: 124 YPPSRDQFATFLVRDLPFCCFFEFRL-HGRLLAIAVTDVLPNGLSAVYTFYDPDEEQRSL 182 Query: 189 GTYNILWQIEQARQLEMPYVYLGYWIKESQKMAYKTNYQPLEALHEGEWSLL 240 G Y ILWQI + +L + VYLGYWIK +KM YKT Y+P+E W L Sbjct: 183 GRYAILWQIAETERLGLQAVYLGYWIKNCRKMNYKTQYRPIELFVNQRWVAL 234 >BMEI1199 [O] COG2935 Putative arginyl-tRNA Bme Brucella melitensis Length = 249 Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 104/255 (40%), Positives = 138/255 (54%), Gaps = 19/255 (7%) Query: 1 MTHLKDLPFSTLQFYATAPYPCSYLDDQQARSQVATPSHLIN---ADVYSELVKTGFRRS 57 MTH P + QF+ TAP PC YL+ QQ R +HL+ ++ L + GFRRS Sbjct: 1 MTHQ---PQQSPQFFLTAPSPCPYLEGQQERKVF---THLVGDKANEINDLLTQGGFRRS 54 Query: 58 GIFTYRPYCDGCNACTPVRIRVADFERNRSQRRAWERNRGLQTLVTNLTYAHEHYELYLR 117 YRP C+ C AC VRI +FE R+ RR W +NR L V + E Y L+ Sbjct: 55 QNIAYRPACEVCRACISVRILAGEFEMTRNMRRVWSQNRDLIGRVHKAQPSTEQYALFRD 114 Query: 118 YQCARHAGGGMDQDSRDQYAQFLLQSKVNTRLVEFR----------EPDGTLRMVSIIDV 167 Y ARH GGM + YA + + VNT+++E+R + DG L V++ DV Sbjct: 115 YLDARHRSGGMSDMTVLDYAMMIEDTHVNTQIIEYRRRGPDSFMSAKGDGELIAVALTDV 174 Query: 168 LNDGLSSVYTFFDPDLPTASFGTYNILWQIEQARQLEMPYVYLGYWIKESQKMAYKTNYQ 227 + DGLS VY+FF P + S GTY IL IE+AR +P+VYLGYW++ S+KM YK + Sbjct: 175 MADGLSMVYSFFSPHMQERSLGTYMILDHIERARAAGLPHVYLGYWVEGSRKMQYKIRFT 234 Query: 228 PLEALHEGEWSLLEG 242 P E L W EG Sbjct: 235 PQEHLGPRGWQRFEG 249 >CC1572 Non COG Length = 279 Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 98/244 (40%), Positives = 132/244 (54%), Gaps = 11/244 (4%) Query: 7 LPFSTLQFYATAPYPCSYLDDQQARSQVATPSHLINAD---VYSELVKTGFRRSGIFTYR 63 P L+F+ TAP PC YL ++ R A HL +D V L + GFRRS YR Sbjct: 5 FPTRQLRFFLTAPTPCPYLPGREERKVFA---HLPLSDGPIVNDSLTQVGFRRSQNIAYR 61 Query: 64 PYCDGCNACTPVRIRVADFERNRSQRRAWERNRGLQTLVTNLTYAHEHYELYLRYQCARH 123 P C+ C AC R ++ +RS+R+ RN L+ + E +EL RY RH Sbjct: 62 PACETCRACQSARAPATEYILSRSERKILGRNDDLERHLVEAEATLEQFELLRRYLLTRH 121 Query: 124 AGGGMDQDSRDQYAQFLLQSKVNTRLVEFREPD-----GTLRMVSIIDVLNDGLSSVYTF 178 A GGM + + Y + + V T L+E+R G L ++DVL DGLS VY+F Sbjct: 122 ADGGMAEMTWPDYVAMVEDTAVRTHLIEYRRKSLDRGPGDLVACVLVDVLADGLSLVYSF 181 Query: 179 FDPDLPTASFGTYNILWQIEQARQLEMPYVYLGYWIKESQKMAYKTNYQPLEALHEGEWS 238 ++PD P S G++ IL I QA+Q +PYVYLGYW+ S+KMAYK + PLE L G WS Sbjct: 182 YEPDQPRRSLGSFIILDHIVQAQQNALPYVYLGYWVPGSEKMAYKARFSPLEILKPGGWS 241 Query: 239 LLEG 242 L+ Sbjct: 242 LMSA 245 >XF1018 [O] COG2935 Putative arginyl-tRNA Xfa Xylella fastidiosa 9a5c Length = 254 Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 95/235 (40%), Positives = 124/235 (52%), Gaps = 5/235 (2%) Query: 8 PFSTLQFYATAPYPCSYLDDQQARSQVATPSHLINADVYSELVKTGFRRSGIFTYRPYCD 67 P LQ + T +PC Y D+ A V P+ +Y + + GFRRSG YRP+C+ Sbjct: 7 PHDDLQLFKTNLHPCGYWPDRWASDLVMDPNDPRLGAIYPQALAWGFRRSGNLLYRPHCE 66 Query: 68 GCNACTPVRIRVADFERNRSQRRAWERNRGLQTLVTNLTYAHEHYELYLRYQCARHAGGG 127 CNAC PVR+ V F NRSQRR RN L T + E LY RY RH GG Sbjct: 67 HCNACVPVRVNVNAFVPNRSQRRCLARNATLVTRIVPAERNAEQLSLYRRYLHQRHPDGG 126 Query: 128 MDQDSRDQYAQFLLQSKVNTRLVEFREP-----DGTLRMVSIIDVLNDGLSSVYTFFDPD 182 MD ++ QFL+ R +E REP G L V++ D+ + LS+VYTF++P+ Sbjct: 127 MDGHGAIEFDQFLIGPWGYGRFMEIREPATNGTPGQLLAVAVTDLTHQALSAVYTFYEPN 186 Query: 183 LPTASFGTYNILWQIEQARQLEMPYVYLGYWIKESQKMAYKTNYQPLEALHEGEW 237 GT IL QI A++ + PY+YLGYWIK+ KM YK +Q LE W Sbjct: 187 AAARGLGTLAILHQIHWAQREQRPYLYLGYWIKDHFKMDYKRRFQKLEIYDGYRW 241