BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0454.p         (165 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO4062 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yer...   141   5e-34
RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral...   135   4e-32
Ztrg [NT] COG0840 Methyl-accepting chemotaxis protein EcZ Escher...   134   7e-32
ECs2026 [NT] COG0840 Methyl-accepting chemotaxis protein Ecs Esc...   134   7e-32
trg [NT] COG0840 Methyl-accepting chemotaxis protein Eco Escheri...   132   3e-31

>YPO4062 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yersinia
           pestis
          Length = 649

 Score =  141 bits (356), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/153 (53%), Positives = 109/153 (71%)

Query: 1   LNASVEAARAGSQGRGFAVVASEVRSLALRSAEAAREVKDLIAASIGSVDQAAQQVKEAD 60
           LNA+VEAARAG QGRGFAVVASEVR+LA RSA+AA+E++ LI  S+  V+     VK A 
Sbjct: 474 LNAAVEAARAGEQGRGFAVVASEVRNLAQRSAQAAKEIEGLIGESVSQVNAGTSLVKNAG 533

Query: 61  QAIVQIVQSFGNVMTTVNEIAMATREQAEGISQVSLSLAEMDRATQQNAALVEQTAAAAD 120
             + +IV+S  +V   + EIA A+ EQ+ GI+QVSL+++EMD  TQQNAALVE++AAAAD
Sbjct: 534 NTMEEIVRSVSHVRDIMAEIASASDEQSRGITQVSLAISEMDSTTQQNAALVEESAAAAD 593

Query: 121 ALTERAATLTASVAVFTLTAPQAMALAGTGGSP 153
           +L E+A  L  +VAVF L+  +     G   +P
Sbjct: 594 SLAEQAILLAQAVAVFRLSEDEGATDEGRVVTP 626


>RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia
           solanacearum
          Length = 543

 Score =  135 bits (340), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/150 (52%), Positives = 105/150 (70%), Gaps = 4/150 (2%)

Query: 1   LNASVEAARAGSQGRGFAVVASEVRSLALRSAEAAREVKDLIAASIGSVDQAAQQVKEAD 60
           LNA+VEAARAG QGRGFAVVA EVRSLA RSA AA+E+K LI  S+G V     +V+EA 
Sbjct: 376 LNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIEDSVGHVSTGTAKVEEAG 435

Query: 61  QAIVQIVQSFGNVMTTVNEIAMATREQAEGISQVSLSLAEMDRATQQNAALVEQTAAAAD 120
           Q I  +V    NV   V+EI+ ++REQ++GI Q++ ++ +MD+ATQ+NA+LVE++A AA 
Sbjct: 436 QIIRDVVAGIQNVTNIVSEISASSREQSDGIEQINEAITQMDKATQENASLVEESATAAQ 495

Query: 121 ALTERAATLTASVAVFTLTAPQAMALAGTG 150
           AL ++A  L   V+ F L A     L+G G
Sbjct: 496 ALQDQANQLADMVSTFKLHAD----LSGRG 521


>Ztrg [NT] COG0840 Methyl-accepting chemotaxis protein EcZ Escherichia
           coli O157:H7 EDL933
          Length = 546

 Score =  134 bits (338), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/153 (50%), Positives = 108/153 (70%)

Query: 1   LNASVEAARAGSQGRGFAVVASEVRSLALRSAEAAREVKDLIAASIGSVDQAAQQVKEAD 60
           LNA+VEAARAG QGRGFAVVASEVR+LA RSA+AA+E++ LI+ S+  +D  + +V  A 
Sbjct: 388 LNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAG 447

Query: 61  QAIVQIVQSFGNVMTTVNEIAMATREQAEGISQVSLSLAEMDRATQQNAALVEQTAAAAD 120
           + +  IV +  +V   + EIA A+ EQ+ GI+QVS +++EMD+ TQQNA+LVE+ +AAA 
Sbjct: 448 KTMSTIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVTQQNASLVEEASAAAV 507

Query: 121 ALTERAATLTASVAVFTLTAPQAMALAGTGGSP 153
           +L E+AA LT +V VF L     +A     G P
Sbjct: 508 SLEEQAARLTEAVDVFRLNKQSVLAEPRGAGEP 540


>ECs2026 [NT] COG0840 Methyl-accepting chemotaxis protein Ecs Escherichia
           coli O157:H7
          Length = 546

 Score =  134 bits (338), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/153 (50%), Positives = 108/153 (70%)

Query: 1   LNASVEAARAGSQGRGFAVVASEVRSLALRSAEAAREVKDLIAASIGSVDQAAQQVKEAD 60
           LNA+VEAARAG QGRGFAVVASEVR+LA RSA+AA+E++ LI+ S+  +D  + +V  A 
Sbjct: 388 LNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAG 447

Query: 61  QAIVQIVQSFGNVMTTVNEIAMATREQAEGISQVSLSLAEMDRATQQNAALVEQTAAAAD 120
           + +  IV +  +V   + EIA A+ EQ+ GI+QVS +++EMD+ TQQNA+LVE+ +AAA 
Sbjct: 448 KTMSTIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVTQQNASLVEEASAAAV 507

Query: 121 ALTERAATLTASVAVFTLTAPQAMALAGTGGSP 153
           +L E+AA LT +V VF L     +A     G P
Sbjct: 508 SLEEQAARLTEAVDVFRLNKQSVLAEPRGAGEP 540


>trg [NT] COG0840 Methyl-accepting chemotaxis protein Eco Escherichia
           coli K12
          Length = 546

 Score =  132 bits (332), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/153 (50%), Positives = 107/153 (69%)

Query: 1   LNASVEAARAGSQGRGFAVVASEVRSLALRSAEAAREVKDLIAASIGSVDQAAQQVKEAD 60
           LNA+VEAARAG QGRGFAVVASEVR+LA RSA+AA+E++ LI+ S+  +D  + +V  A 
Sbjct: 388 LNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAG 447

Query: 61  QAIVQIVQSFGNVMTTVNEIAMATREQAEGISQVSLSLAEMDRATQQNAALVEQTAAAAD 120
           + +  IV +  +V   + EIA A+ EQ+ GI+QVS +++EMD+ TQQNA+LVE+ +AAA 
Sbjct: 448 KTMSTIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVTQQNASLVEEASAAAV 507

Query: 121 ALTERAATLTASVAVFTLTAPQAMALAGTGGSP 153
           +L E+AA LT +V VF L      A     G P
Sbjct: 508 SLEEQAARLTEAVDVFRLHKHSVSAEPRGAGEP 540